Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1099 89.7 3e-13 >seq1099 Length=206994 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || || |||| || | ||| | ||| | || ||||| || || || |||||||||| Sbjct 75127 CCACCCCTTAGACGGAGCACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCG 75068 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 | | || || || | ||||||||| ||| || | |||||||||||| | || Sbjct 75067 AGGGTACGTCCATCCTCAAGTTGCTTTCCGGCAAAGATCAGACGTTGCTGGTCTGGAGGA 75008 Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322 || || ||||| || ||| || || | | ||| |||||| | ||| Sbjct 75007 ATTCCCTCTTTATCTTGGATCTTGGTCTTAACATTGTCAATAGTGTCGGAACTCTCAACC 74948 Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||||||||||| |||||||| |||||||| || ||||| |||||||| Sbjct 74947 TCCAGAGTTATAGTTTTTCCGGTAAGAGTCTTGACGAAGATTTGCAT 74901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318473544147276