Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq37 104 2e-17 seq329 93.3 4e-14 seq810 82.4 7e-11 >seq37 Length=1785839 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 23986 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGG 24045 |||||||||| | || || ||||| |||| |||||| | || ||| | ||||| || Sbjct 885697 ACAAAATGCAGATCTTCGTCAAAACCCTAACCGGAAAAACCATAACCCTAGAAGTAGAAT 885756 Query 24046 CCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105 || |||||| ||||| | |||||| ||||| |||||||||||||| || || | Sbjct 885757 CCTCCGACACAATCGACAACGTCAAAGCCAAGATCCAAGACAAAGAAGGCATCCCACCGG 885816 Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATT 24165 | ||||| | || || | || ||| || || | ||||||| |||| | ||| | Sbjct 885817 ACCAACAACGCCTCATCTTCGCCGGAAAACAGTTGGAAGATGGAAGAACACTTGCCGACT 885876 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 | ||||| || || |||||||| | || || ||| Sbjct 885877 ACAACATCCAGAAGGAATCTACTCTCCACTTGGTG 885911 >seq329 Length=298387 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || ||| | || || ||| | || || | ||||| ||| Sbjct 179857 ATGCAAATCTTTGTGAAGACACTTACAGGGAAAACAATCACTCTAGAAGTAGAGAGTTCT 179916 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | || || ||||| ||||||||||| || ||||| |||||| Sbjct 179917 GATACAATTGACAATGTTAAGACCAAGATCCAAGACAAAGAAGGGATTCCTCCAGATCAA 179976 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | | || || |||||||| |||| |||| | | ||||| ||| Sbjct 179977 CAGAGGCTAATCTTTGCTGGTAAACAACTCGAGGATGGAAGAACCCTTGCAGATTACAAC 180036 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| ||||| || | |||||||| Sbjct 180037 ATTCAAAAGGAATCAACTCTCCATTTAGT 180065 >seq810 Length=562993 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || ||||| | || || | || || ||| | Sbjct 115304 ATGCAGATTTTCGTCAAGACCTTGACGGGAAAGACCATCACGTTGGAGGTTGAGAGCTCA 115245 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || |||||| ||||| || ||||| || || || || Sbjct 115244 GACACCATCGACAATGTTAAGGCGAAGATTCAAGACAAGGAGGGCATTCCCCCAGACCAG 115185 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||||| || ||||||||| || || |||| || | | ||||| || Sbjct 115184 CAGAGGTTGATTTTCGCCGGCAAGCAGCTGGAGGATGGGAGGACTCTTGCGGATTACAAT 115125 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || || ||||| ||||| |||| || || | | ||||| |||||| Sbjct 115124 ATCCAGAAAGAGTCTACCCTTCACTTGGTTCTTCGTTTGAGGGGAGGA 115077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429525919250610