Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq329 95.1 1e-14 seq37 95.1 1e-14 seq810 93.3 4e-14 seq1435 87.8 2e-12 seq865 86.0 5e-12 >seq329 Length=298387 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || || || || || |||||||| | || || | Sbjct 180085 ATGCAGATCTTTGTTAAGACCCTTACTGGTAAGACCATTACTCTTGAGGTTGAAACTTCT 180144 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || || || ||| |||||||||||| | | |||||| Sbjct 180145 GACACGATTGAAAATGTTAAGACCAAGATTCACGATAAAGAAGGTATTGCACCTGATCAA 180204 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 |||||||| || | ||| || ||||| ||||| |||| | ||| | || || ||||| Sbjct 180205 CAAAGACTCATCTTTGCTGGGAAACAGTTAGAGGATGGTAGAACTCTTGCAGACTATAAT 180264 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||| ||||||||| | ||| |||| | | ||| |||| || Sbjct 180265 ATTCAAAAGGAGTCTACTCTGCATTTGGTACTTCGTTTGAGAGGTGG 180311 >seq37 Length=1785839 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||||| || || |||||||| || || ||||||||||| ||| | ||| || ||| Sbjct 885699 AAAATGCAGATCTTCGTCAAAACCCTAACCGGAAAAACCATAACCCTAGAAGTAGAATCC 885758 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 |||||| | ||||| || ||| || || || ||||||||| |||| || Sbjct 885759 TCCGACAC-AATCGACAACGTCAAAGCCAAGATCCAAGACAAAGAAGGCATCCCACCGGA 885817 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 || ||| | || || | || || ||||| || ||||||| | ||| | ||||| || Sbjct 885818 CCAACAACGCCTCATCTTCGCCGGAAAACAGTTGGAAGATGGAAGAACACTTGCCGACTA 885877 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||| || || || |||||| | || ||||| Sbjct 885878 CAACATCCAGAAGGAATCTACTCTCCACTTGGTG 885911 >seq810 Length=562993 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||||||||| || ||||| ||||| ||||| ||| | || |||| | | Sbjct 115532 ATGCAGATTTTTGTCAAGACCCTCACCGGAAAGACCATCACCTTAGAGGTGGAGAGCTCC 115473 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| || ||||| || || ||||||| ||||| || || | ||| || || Sbjct 115472 GACACCATT-GACAATGTCAAGGCAAAAATTCAGGATAAGGAGGGTATTCCCCCAGACCA 115414 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || | |||| ||||| || ||| | || |||| | || |||| || || || Sbjct 115413 GCAGAGGTTGATTTTCGCGGGTAAGCAACTTGAGGATGGCCGTACTTTGGCTGACTACAA 115354 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| || || |||||||| | || ||||| | | ||| | ||||| Sbjct 115353 CATCCAGAAGGAGTCTACCCTTCACCTGGTGCTCCGTTTGAGGGGAGG 115306 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/202 (71%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAA-ACG-GAGTCC 115342 |||||| || || || ||||| ||||| ||||||||||| ||| ||||| || ||| | Sbjct 115989 AATGCAGATCTTCGTGAAAACCCTCACTGGAAAAACCATCACCCTCGAAGTCGAAAGTTC 115930 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 |||||| || ||||| || || ||||| ||||| || || | ||| || Sbjct 115929 --CGACACCATT-GACAACGTCAAGGCTAAAATCCAAGATAAGGAGGGTATTCCCCCAGA 115873 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 |||||||| || || | || || ||||| | || |||| | ||| | |||||||| Sbjct 115872 CCAGCAAAGGCTGATCTTCGCCGGAAAACAGCTCGAGGATGGCCGAACTCTTGCCGATTA 115813 Query 115462 TAACATTCAAAAAGAGTCTACT 115483 ||||| || || ||||| ||| Sbjct 115812 CAACATCCAGAAGGAGTCAACT 115791 >seq1435 Length=543809 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| || ||||| || || || |||||||| ||| | ||| ||| ||| Sbjct 91726 AATGCAAATTTTCGTGAAAACCCTAACTGGGAAAACCATAACCCTAGAAGTGGAATCCTC 91785 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 ||| || | ||||| || ||| || || || ||||| || |||| || | Sbjct 91786 CGATAC-AATCGACAACGTCAAAGCCAAGATCCAAGACAAAGAGGGAATCCCACCGGACC 91844 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 ||||| | || || | || || || |||||||| |||| | ||| | |||||||| | Sbjct 91845 AGCAACGCCTGATCTTCGCCGGGAAGCAATTAGAGGATGGAAGAACACTCGCCGATTACA 91904 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||||| || || || || | || ||||| Sbjct 91905 ACATTCAGAAGGAATCGACCCTTCACTTGGTG 91936 >seq865 Length=406355 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || || || || || ||||| ||| |||| || | | Sbjct 7013 ATGCAGATCTTTGTGAAGACTCTAACAGGGAAGACCATCACCCTCGAGGTTGAAAGCTCC 6954 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| |||| || || ||||||| ||||| || ||| | ||| || || Sbjct 6953 GACACCATTG-ACAACGTCAAGGCAAAAATTCAAGATAAGGAGGGCATTCCCCCAGACCA 6895 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||||||||| | || || || ||| | ||||||| | |||| | ||||| || || Sbjct 6894 GCAAAGACTTATCTTCGCCGGAAAGCAACTTGAAGATGGCCGAACCCTTGCCGACTACAA 6835 Query 115465 CATTCAAAAAGAGTCTACT 115483 ||| || || || || ||| Sbjct 6834 CATCCAGAAGGAATCAACT 6816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424938299183440