Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq37 100 2e-16 seq1435 82.4 6e-11 seq329 82.4 6e-11 >seq37 Length=1785839 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 111184 AAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111243 |||||||| || || |||||||| | ||||| |||||||| ||| | ||| ||| || Sbjct 885699 AAAATGCAGATCTTCGTCAAAACCCTAACCGGAAAAACCATAACCCTAGAAGTAGAATCC 885758 Query 111244 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111303 ||| | | | | | || ||| || || |||||||||||| | || || Sbjct 885759 TCCGACACAATCGACAACGTCAAAGCCAAGATCCAAGACAAAGAAGGCATCCCACCGGAC 885818 Query 111304 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111363 |||||| | || || | || || ||||| ||||||||| | ||| | ||||| || Sbjct 885819 CAACAACGCCTCATCTTCGCCGGAAAACAGTTGGAAGATGGAAGAACACTTGCCGACTAC 885878 Query 111364 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || || |||||||| || || || ||| | ||||| || ||||| Sbjct 885879 AACATCCAGAAGGAATCTACTCTCCACTTGGTGCTTCGTCTTCGTGGTGG 885928 >seq1435 Length=543809 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||||||||| || ||||| | || || |||||||| ||| | ||| |||| || Sbjct 91726 AATGCAAATTTTCGTGAAAACCCTAACTGGGAAAACCATAACCCTAGAAGTGGAATCCTC 91785 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 |||| | | | | | || ||| || || |||||||| || | || || || Sbjct 91786 CGATACAATCGACAACGTCAAAGCCAAGATCCAAGACAAAGAGGGAATCCCACCGGACCA 91845 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||| | || || | || || || ||||| || ||| | ||| | |||||||| || Sbjct 91846 GCAACGCCTGATCTTCGCCGGGAAGCAATTAGAGGATGGAAGAACACTCGCCGATTACAA 91905 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || ||||| || || || || ||| | ||||| || ||||| Sbjct 91906 CATTCAGAAGGAATCGACCCTTCACTTGGTGCTCCGTCTTCGTGGTGG 91953 >seq329 Length=298387 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 111271 AAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAA 111330 || ||| ||| |||||||| || | ||||||||||| || || | ||| || ||| Sbjct 180169 AAGATTCACGATAAAGAAGGTATTGCACCTGATCAACAAAGACTCATCTTTGCTGGGAAA 180228 Query 111331 CAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACAT 111390 || || || ||| || |||| | || || |||||||| ||||| || ||||| || ||| Sbjct 180229 CAGTTAGAGGATGGTAGAACTCTTGCAGACTATAATATTCAAAAGGAGTCTACTCTGCAT 180288 Query 111391 TTAGTGTTGCGTCTGCGCGGTGG 111413 || || | ||| || | ||||| Sbjct 180289 TTGGTACTTCGTTTGAGAGGTGG 180311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422636496780400