Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq329 107 2e-18 seq1435 96.9 3e-15 >seq329 Length=298387 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 33899 AACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTG 33958 |||| || | ||| || || || |||||||| || |||||||||||| || ||||||| Sbjct 180541 AACCCCCACGCAGACGAAGAACAAGATGAAGAGTAGACTCCTTCTGAATATTATAATCTG 180482 Query 33959 CCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 |||| || | | || ||||||||||| || ||||| || | | ||||||||| | Sbjct 180481 CCAAAGTTCTCCCATCCTCCAATTGCTTCCCAGCAAAGATAATCCTCTGCTGATCTGGTG 180422 Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGC 34078 | | | |||||| ||| ||| || ||||| | | |||| | | ||| Sbjct 180421 GGATACCCTCTTTATCCTGAATCTTAGTCTTAACATTATCAATTGTATCTGAACTTTCCA 180362 Query 34079 ATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| | || || || ||||| || ||||| ||||||||||||||||| Sbjct 180361 CTTCCAAAGTAATCGTCTTTCCAGTAAGTGTCTTCACAAAGATTTGCAT 180313 >seq1435 Length=543809 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || ||||||| ||||| || |||||||||||||||||||| || | | || Sbjct 91944 AGACGGAGCACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAATCGGCGAGTGTTCTT 91885 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || || |||||||| ||||| || |||||||| ||||| ||| || | | |||| Sbjct 91884 CCATCCTCTAATTGCTTCCCGGCGAAGATCAGGCGTTGCTGGTCCGGTGGGATTCCCTCT 91825 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGCATTCGACCGT 34088 |||| | | | || |||| | || | |||| | ||||| ||| | || Sbjct 91824 TTGT-CTTGGATCTTGGCTTTGACGTTGTCGATTGTATCGGAGGATTCCACTTCTAGGGT 91766 Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 ||| ||||| || ||||| |||||||| || ||||||||| Sbjct 91765 TATGGTTTTCCCAGTTAGGGTTTTCACGAAAATTTGCATT 91726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396683674686124