Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq66 87.8 2e-12 seq1408 86.0 7e-12 seq2447 84.2 3e-11 seq1816 84.2 3e-11 seq567 84.2 3e-11 seq295 84.2 3e-11 seq261 84.2 3e-11 seq71 84.2 3e-11 seq28 84.2 3e-11 >seq66 Length=1001823 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 ||||||||||| || || || || ||||| || |||| | ||| ||||| | || Sbjct 953087 TGAAGCCCTTCGTCTCGCGATATCAGCTCGTTTGAGAAGGTTAATCCGGGCATTAACCCG 953028 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | || || ||||| || |||| || |||||||| || |||||||| || || || || Sbjct 953027 CGCTTTTTGAGCCAGAATATGGAGCAGAAACTTCCGGAGAAGAAGATCCCTTCAACGCAA 952968 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAA 119653 |||||||| | ||| | ||| ||||| Sbjct 952967 GCGAAAGCAATTAGCCTCTCGGCAAA 952942 >seq1408 Length=664912 Score = 86.0 bits (94), Expect = 7e-12 Identities = 73/88 (83%), Gaps = 3/88 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||| | Sbjct 526005 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCAGGTTCGACCCCTGCA 525946 Query 136775 TTGGGAACAGCTTTTAGATATATTTTTT 136802 | || ||| ||||| | |||||||| Sbjct 525945 TGGGCCACA-TTTTTATGTTTATTTTTT 525919 >seq2447 Length=65405 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||| Sbjct 3602 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCAGGTTCGACCCC 3547 >seq1816 Length=169307 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||| Sbjct 25315 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCAGGTTCGACCCC 25370 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||| Sbjct 26768 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCAGGTTCGACCCC 26823 >seq567 Length=160149 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||| Sbjct 24065 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCAGGTTCGACCCC 24120 >seq295 Length=338627 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||| Sbjct 112734 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCAGGTTCGACCCC 112789 >seq261 Length=371131 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||| Sbjct 173667 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCAGGTTCGACCCC 173612 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||| Sbjct 194327 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCAGGTTCGACCCC 194272 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||| Sbjct 194481 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCAGGTTCGACCCC 194426 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||| Sbjct 194644 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCAGGTTCGACCCC 194589 >seq71 Length=976879 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||| Sbjct 367204 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCAGGTTCGACCCC 367259 >seq28 Length=1144075 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772 ||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||| Sbjct 969959 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCAGGTTCGACCCC 969904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588399819503600