Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq34 300 2e-76 seq52 295 8e-75 seq885 223 4e-53 seq119 215 6e-51 seq1508 136 5e-27 seq219 136 5e-27 seq1 134 2e-26 seq116 129 7e-25 seq44 129 7e-25 seq2654 96.9 4e-15 >seq34 Length=1960455 Score = 300 bits (332), Expect = 2e-76 Identities = 687/1038 (66%), Gaps = 21/1038 (2%) Strand=Plus/Plus Query 170529 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTTGTATTCATAGGATGGTCTGGT 170588 |||||| | | || ||||||||| ||| || |||||||| || |||| ||||||||| Sbjct 370137 TTTGATAGTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGT 370196 Query 170589 CTTTTACTTCTGCCTTGTGCATACCTATCAATCGGTGGTTGGTTCTTAGGGACTACCTTC 170648 || || || | |||||||| || | | | || |||||||| || || ||||| Sbjct 370197 CTATTGCTCTTTCCTTGTGCTTATTTCGCCTTAGGGGGTTGGTTTACGGGTACAACCTTT 370256 Query 170649 GTTACATCATGGTATACACATGGTGTTGCTTCCTCATATCTTGAGGGATGTAACTTCCTA 170708 || || ||||||||||| ||||| | || || ||| | || || || || ||| || Sbjct 370257 GTAACTTCATGGTATACCCATGGATTGGCCAGTTCTTATTTGGAAGGCTGCAATTTCTTA 370316 Query 170709 ACAGCAGCAGTTTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 170768 || ||||||||||| || |||| | | | || | | |||| || ||||| Sbjct 370317 ACCGCAGCAGTTTCTACTCCTGCTAATAGTTTAGCCCACTCTTTATTGTTACTGTGGGGT 370376 Query 170769 CCTGAAGCACAAGGTTCATTTGTTCGTTGGTTACAACTCGGAGGTTTATGGAACTTTGTA 170828 |||||||||||||| ||| |||||||| ||| | || || | ||| ||||| Sbjct 370377 CCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGCCTGTGGGCTTTTGTT 370436 Query 170829 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCAGACAATTTGAGATCGCAGGA 170888 || | ||||| | || | ||| |||||||| ||| | | ||||| || | || | Sbjct 370437 GCTCTTCATGGTGCTTTCGCACTAATAGGTTTTATGTTACGTCAATTCGAACTTGCTCGG 370496 Query 170889 CTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACT 170948 ||| | | ||||| || ||| |||||||||||| | || || || || | Sbjct 370497 TCTGTTCAATTGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTT 370556 Query 170949 AGCATCTTTCTGATCTATCCACTAGGTCAGCACAGTTGGTTCTTCGCACCATCATTCGGT 171008 | || ||||| ||| |||||||||| |||||||||| || || || ||| Sbjct 370557 TCTGTATTCCTGATTTATGCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 370616 Query 171009 GTCGCAGCAATTTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAAT 171068 || ||||| || || || | || | || | ||||| || || || || |||| Sbjct 370617 GTAGCAGCTATATTCCGATTCATTCTCTTTTTTCAAGGGTTTCATAATTGGACGCTGAAC 370676 Query 171069 CCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTATTATGTGCCATTCAT 171128 |||||||| |||||||| ||||| || || | || | || | |||| || |||||| Sbjct 370677 CCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGTCGCTCTGCTATGCGCTATTCAT 370736 Query 171129 GGTGCAACAGTGCAGAACACATTGTATGAAGACACATCAGTTTATACTGATAATAAAATT 171188 ||||| || || | || || || | |||||| | | || | |||| Sbjct 370737 GGTGCTACCGTTGAAAATACTTTATTTGAAGAT------GGTGATGGGGCAAATA----- 370785 Query 171189 CAAAGCACAACATTCCGTGCCTTTGATCCTACACAGGAAGAAGAAACTTACAGTATGATT 171248 ||||||| | ||| | || || || | ||||||||||| ||| | Sbjct 370786 ----------CATTCCGGACTTTTAACCCAACCCAAGCTGAAGAAACTTATTCAATGGTC 370835 Query 171249 ACAGCAAACAGATTCTGGTCACAGATATTTGGTATTGCTTTCTCTAACAAAAGATTTTTA 171308 || || ||| | || ||||| || || ||||| ||||||| || || ||| | | ||| Sbjct 370836 ACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 370895 Query 171309 CACTTCCTTATGTTGTTCGTTCCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTA 171368 || ||| ||||||| || || || || | ||| | |||| || | || | || Sbjct 370896 CATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTC 370955 Query 171369 GGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCTCAAGAGATAAGAGCAGCAGAA 171428 ||||| || | ||||| | || || || || || || || || || | ||||| ||| Sbjct 370956 GGTCTGGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCTGAA 371015 Query 171429 GACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCA 171488 || || || || || ||||| ||||| || ||||| || | || || ||||| | || Sbjct 371016 GATCCTGAATTTGAAACTTTTTACACCAAAAATATTCTCTTAAACGAGGGTATCCGTGCT 371075 Query 171489 TGGATGTCATCAGTTGACCAACCACATGAGAACTTCGTATTCCCAGAAGAAGTGTTACCA 171548 |||||| | | || || || ||||| ||| | ||||||| || || || |||| Sbjct 371076 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCC 371135 Query 171549 AGAGGTAACGCACTTTAA 171566 | || ||||| |||||| Sbjct 371136 CGTGGAAACGCTCTTTAA 371153 >seq52 Length=1114353 Score = 295 bits (326), Expect = 8e-75 Identities = 475/680 (70%), Gaps = 2/680 (0%) Strand=Plus/Minus Query 169442 TTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGT-TTCATC 169500 |||| |||||||||||| | ||||| | |||| | || ||| | | ||| || || Sbjct 279514 TTGGATGGTTTGGTGTTTTGATGATCTCTACCTTATTGACTGCAACTTC-TGTATTTATT 279456 Query 169501 GTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGT 169560 | || |||||||| | ||||| || ||||| || || || | ||||| || | || Sbjct 279455 ATAGCCTTCATTGCTACTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCCGGA 279396 Query 169561 TCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATC 169620 ||| | | || || || || || || | ||||| || |||| | || | ||||| Sbjct 279395 TCTCTACTTTACGGAAATAATATTATTTTGGGTGCCATTATTCCTACTTCTACAGCTATA 279336 Query 169621 GGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGT 169680 || | ||||| || ||||| |||||||| ||| | |||||||| ||||| || |||||| Sbjct 279335 GGGTTGCACTTTTATCCAATATGGGAAGCGGCATCGGTTGATGAGTGGTTATACAATGGT 279276 Query 169681 GGTCCTTATCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGA 169740 ||||||||| | | | | | |||||| | ||||| | | || ||||| | Sbjct 279275 GGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGT 279216 Query 169741 CAGTGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTTGCATACTCTGCA 169800 |||||||||| | | | |||| ||||| |||||||| ||||||||| || || Sbjct 279215 GAGTGGGAACTTAGTTTCCGTCTAGGTATGCGCCCTTGGATTGCTGTTGCATATTCCGCT 279156 Query 169801 CCAGTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCT 169860 ||||| | | || ||||| ||||| | |||||| | ||||| || || ||| Sbjct 279155 CCAGTTGCAGTGGCTACTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAACTTTTCT 279096 Query 169861 GATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAG 169920 ||||||||||| ||| | ||||| |||| ||||||||||||| | | ||||| || ||| Sbjct 279095 GATGGTATGCCTCTATGAATCTCTGGTAATTTCAACTTTATGATTATATTCCAGGCTGAG 279036 Query 169921 CATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATCT 169980 | ||||| || ||||| || || |||||| ||| |||| || | ||||| || || Sbjct 279035 AACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGTTGGTGTATTCGGTGGCTCC 278976 Query 169981 TTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACAGAG 170040 |||| || ||||||||||| | || ||||| | | || || ||||| ||| | Sbjct 278975 CTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATTAGGGAAACCACATAA 278916 Query 170041 CAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTA 170100 | || || || | ||||| | ||||| ||||| |||||||| || || || ||| Sbjct 278915 AATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTA 278856 Query 170101 GCAGCACACGGTTACTTTGG 170120 || || || ||||| ||||| Sbjct 278855 GCTGCTCATGGTTATTTTGG 278836 >seq885 Length=390276 Score = 223 bits (246), Expect = 4e-53 Identities = 530/803 (66%), Gaps = 21/803 (3%) Strand=Plus/Minus Query 170529 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTTGTATTCATAGGATGGTCTGGT 170588 |||||| | | || ||||||||| ||| || |||||||| || |||| ||||||||| Sbjct 345708 TTTGATAGTATGGATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGT 345649 Query 170589 CTTTTACTTCTGCCTTGTGCATACCTATCAATCGGTGGTTGGTTCTTAGGGACTACCTTC 170648 || || || | ||||| | || | | | || || ||||| || || ||||| Sbjct 345648 CTATTGCTCTTTCCTTGCACTTATTTCGCCTTAGGGGGATGGTTTACGGGTACAACCTTT 345589 Query 170649 GTTACATCATGGTATACACATGGTGTTGCTTCCTCATATCTTGAGGGATGTAACTTCCTA 170708 || || ||||||||||| ||||| | || || ||| | || || || || ||| || Sbjct 345588 GTAACTTCATGGTATACCCATGGATTGGCCAGTTCTTATTTGGAAGGCTGCAATTTCTTA 345529 Query 170709 ACAGCAGCAGTTTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 170768 || ||||||||||| || |||| | | | || | | |||| || ||||| Sbjct 345528 ACCGCAGCAGTTTCTACTCCTGCTAATAGTTTAGCCCACTCTTTATTGTTACTGTGGGGT 345469 Query 170769 CCTGAAGCACAAGGTTCATTTGTTCGTTGGTTACAACTCGGAGGTTTATGGAACTTTGTA 170828 |||||||||||||| ||| |||||||| ||| | || || | ||| ||||| Sbjct 345468 CCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGCCTGTGGGCTTTTGTT 345409 Query 170829 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCAGACAATTTGAGATCGCAGGA 170888 || | ||||| | || | || |||||||| ||| | | ||||| || | || | Sbjct 345408 GCTCTTCATGGTGCTTTCGCACCAATAGGTTTTATGTTACGTCAATTCGAACTTGCTCGG 345349 Query 170889 CTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACT 170948 ||| | | ||||| || ||| |||||||||||| | || || || || | Sbjct 345348 TCTGTTCAATTGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTT 345289 Query 170949 AGCATCTTTCTGATCTATCCACTAGGTCAGCACAGTTGGTTCTTCGCACCATCATTCGGT 171008 | || ||||| |||||||||||||| |||||||||| || || || ||| Sbjct 345288 TCTGTATTCCTGATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 345229 Query 171009 GTCGCAGCAATTTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAAT 171068 || ||||| || || || | || | || | ||||| || || || || |||| Sbjct 345228 GTAGCAGCTATATTCCGATTCATTCTCTTTTTTCAAGGGTTTCATAATTGGACGCTGAAC 345169 Query 171069 CCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTATTATGTGCCATTCAT 171128 |||||||| |||||||| ||||| || || | || | || | |||| || |||||| Sbjct 345168 CCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCCGCTCTGCTATGCGCTATTCAT 345109 Query 171129 GGTGCAACAGTGCAGAACACATTGTATGAAGACACATCAGTTTATACTGATAATAAAATT 171188 ||||| || || | || || || | ||||| || |||| Sbjct 345108 GGTGCTACCGTTAAAAATACTTTATTTGAAG------------ATGGTGAT-----GGGG 345066 Query 171189 CAAAGCACAACATTCCGTGCCTTTGATCCTACACAGGAAGAAGAAACTTACAGTATGATT 171248 |||| |||||||| || ||| | || || || | ||||||||||| ||| | Sbjct 345065 CAAA----TACATTCCGGGCGTTTAACCCAACCCAAGCTGAAGAAACTTATTCAATGGTC 345010 Query 171249 ACAGCAAACAGATTCTGGTCACAGATATTTGGTATTGCTTTCTCTAACAAAAGATTTTTA 171308 || || ||| | || ||||| || || ||||| ||||||| || || ||| | | ||| Sbjct 345009 ACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 344950 Query 171309 CACTTCCTTATGTTGTTCGTTCC 171331 || ||| ||||||| || || || Sbjct 344949 CATTTCTTTATGTTATTTGTACC 344927 >seq119 Length=805478 Score = 215 bits (238), Expect = 6e-51 Identities = 362/518 (70%), Gaps = 8/518 (2%) Strand=Plus/Plus Query 169524 TGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGTTCTTTCTTGTATGGTAACAACAT 169583 ||| ||||| || || || | ||||| || | || ||| | | || | || || || Sbjct 179542 TGTTGATATTGATGGTATTCGTGAACCTGTGTCCGGATCTCTACTTTACTGAAATAATAT 179601 Query 169584 CATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATCGGACTACACTTCTACCCAATCTG 169643 || || | ||| || |||| | || ||||| || ||||| || ||||| || Sbjct 179602 TATTTCGGCTGCCATTATTCCTACTTCTGCAGCTATAGGGTGGCACTTTTATCCAATATG 179661 Query 169644 GGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGTGGTCCTTAT---CAGTTGGTAAT 169700 |||||| || | |||||||| ||||| || ||||||||||||||| || | || | Sbjct 179662 GGAAGCGACATCGGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAACAAATTGT--T 179719 Query 169701 CTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAG 169760 || | ||||| | ||||| | | || ||||| |||||||||| | | | Sbjct 179720 CTAC-ACTTCTTACTTGGTGTAGCTTGTTATATGGGTCATGAGTGGGAACTTAGTTTCCG 179778 Query 169761 ATTAGGAATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCATTC-G 169819 ||||| ||||| |||| || ||||||||| || || ||||| | | | | | | | Sbjct 179779 TTTAGGTATGCGCCCTTATATTGCTGTTGCATATTCCGCTCCAGTTGCAG-TACCTACTG 179837 Query 169820 CTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTA 169879 |||| ||||| | |||||| | | ||| || | | |||||||||||||| ||||| | Sbjct 179838 CTGTTTTCTTGATCTACCCAATCGATCAAGGAACCTATTCTGATGGTATGCCTCTAGGAA 179897 Query 169880 TCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAGCATAACATTCTAATGCATC 169939 |||| | ||||||||||||| || | || ||||| || ||||| ||||| || ||||| Sbjct 179898 TCTCCGATACTTTCAACTTTGTGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACT 179957 Query 169940 CTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATCTTTATTCTCAGCAATGCATG 169999 | || |||||| ||| ||| | || | ||||| || || |||| || ||||||| Sbjct 179958 CATTTCACATGTTAGGTGTACCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATG 180017 Query 170000 GTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACA 170037 |||| ||||| ||||| | | ||||| ||||||||| Sbjct 180018 GTTCCCTTGTAACTTCTAGTTTGATCAGGGAAACAACA 180055 Score = 190 bits (210), Expect = 2e-43 Identities = 237/325 (73%), Gaps = 0/325 (0%) Strand=Plus/Plus Query 170059 GGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTT 170118 ||||| | ||||| ||||| | |||||| || || || ||||| || || ||||| ||| Sbjct 240430 GGTTACAGATTCGGTCAAGAGGGAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTT 240489 Query 170119 GGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGTCTACACTTCTTCCTA 170178 ||||| | |||||||| |||||| ||||||||||| | | ||||||||||| || Sbjct 240490 GGTCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTA 240549 Query 170179 GCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTC 170238 || | || ||||| ||| || | ||||| || || | ||||| | || || | ||| Sbjct 240550 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATCGATTTC 240609 Query 170239 AACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCTAACGGAAAAATCGTCCCA 170298 || || ||||||||||| || |||||||| || |||||| | | || | | Sbjct 240610 AAGTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAAT 240669 Query 170299 ACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAAGTTATGCATGAAAGAAAT 170358 || |||| |||| | | ||| | | ||| | | |||| |||||||||||||| | ||| Sbjct 240670 ACTTGGGCTGATATCATTAACCGTCCTAACCTTGATATGTAAGTTATGCATGAACGTAAT 240729 Query 170359 GCACACAACTTCCCACTAGACCTAG 170383 || || |||||||| |||||||||| Sbjct 240730 GCTCATAACTTCCCTCTAGACCTAG 240754 >seq1508 Length=419047 Score = 136 bits (150), Expect = 5e-27 Identities = 181/249 (73%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 169442 TTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGT-TTCATC 169500 |||| |||||||||||| | ||||| || |||| | || ||| | | ||| || || Sbjct 272716 TTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACTGCAACTTC-TGTATTTATT 272658 Query 169501 GTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGT 169560 | || |||||||| || ||||| || ||||| || || || | ||||| || | || Sbjct 272657 ATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCCGGA 272598 Query 169561 TCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATC 169620 ||| | | || || || || || || || ||||| || |||| | || ||||| Sbjct 272597 TCTCTACTTTACGGAAATAATATTATTTCGGGTGCCATTATTCCTACTTCTGCAGCTATA 272538 Query 169621 GGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGT 169680 || | ||||| || |||||||||||||| ||| | |||||||| ||||| || |||||| Sbjct 272537 GGGTTGCACTTTTATCCAATCTGGGAAGCGGCATCGGTTGATGAGTGGTTATACAATGGT 272478 Query 169681 GGTCCTTAT 169689 ||||||||| Sbjct 272477 GGTCCTTAT 272469 >seq219 Length=449544 Score = 136 bits (150), Expect = 5e-27 Identities = 181/249 (73%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 169442 TTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGT-TTCATC 169500 |||| |||||||||||| | ||||| || |||| | || ||| | | ||| || || Sbjct 176409 TTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACTGCAACTTC-TGTATTTATT 176351 Query 169501 GTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGT 169560 | || |||||||| || ||||| || ||||| || || || | ||||| || | || Sbjct 176350 ATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCCGGA 176291 Query 169561 TCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATC 169620 ||| | | || || || || || || || ||||| || |||| | || ||||| Sbjct 176290 TCTCTACTTTACGGAAATAATATTATTTCGGGTGCCATTATTCCTACTTCTGCAGCTATA 176231 Query 169621 GGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGT 169680 || | ||||| || |||||||||||||| ||| | |||||||| ||||| || |||||| Sbjct 176230 GGGTTGCACTTTTATCCAATCTGGGAAGCGGCATCGGTTGATGAGTGGTTATACAATGGT 176171 Query 169681 GGTCCTTAT 169689 ||||||||| Sbjct 176170 GGTCCTTAT 176162 >seq1 Length=3292865 Score = 134 bits (148), Expect = 2e-26 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 170183 TTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTCAACT 170242 |||| ||||| ||| || | ||||| || || | ||||| | || ||||| ||||||| Sbjct 1433789 TTTTTCCTGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACT 1433730 Query 170243 TGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCTAACGGAAAAATCGTCCCAACAT 170302 | ||||||||||| || |||||||| || |||||| | | || | | || | Sbjct 1433729 TAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTT 1433670 Query 170303 GGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAAGTTATGCATGAAAGAAATGCAC 170362 ||| |||| | | ||| | || ||| | ||||||||||||||||||||| | ||||| | Sbjct 1433669 GGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTC 1433610 Query 170363 ACAACTTCCCACTAGACCTAGC 170384 | |||||||| ||||||||||| Sbjct 1433609 ATAACTTCCCTCTAGACCTAGC 1433588 >seq116 Length=804226 Score = 129 bits (142), Expect = 7e-25 Identities = 232/339 (68%), Gaps = 0/339 (0%) Strand=Plus/Minus Query 171228 GAAGAAACTTACAGTATGATTACAGCAAACAGATTCTGGTCACAGATATTTGGTATTGCT 171287 ||||||||||| ||| | || || ||| | || ||||| || || ||||| ||||| Sbjct 210777 GAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCT 210718 Query 171288 TTCTCTAACAAAAGATTTTTACACTTCCTTATGTTGTTCGTTCCTGTCATGGGTATGTGG 171347 || || || ||| | | ||||| ||| ||||||| || || || || | ||| | ||| Sbjct 210717 TTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTTTGG 210658 Query 171348 ACATCATCTATAGGTATCGTAGGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCT 171407 | || | || | || ||||| || | ||||| | || || || || || || Sbjct 210657 ATGAGTGCTCTTGGAGTAGTCGGTCTGGCTTTGAACCTACGTGCCTATGACTTCGTTTCC 210598 Query 171408 CAAGAGATAAGAGCAGCAGAAGACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTT 171467 || || || | ||||| ||||| || || || || ||||| ||||| || ||||| || Sbjct 210597 CAGGAAATCCGTGCAGCTGAAGATCCTGAATTTGAAACTTTTTACACCAAAAATATTCTC 210538 Query 171468 CTTAATGAAGGTATGAGAGCATGGATGTCATCAGTTGACCAACCACATGAGAACTTCGTA 171527 | || || ||||| | || |||||| | | || || || ||||| ||| | || Sbjct 210537 TTAAACGAGGGTATCCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATA 210478 Query 171528 TTCCCAGAAGAAGTGTTACCAAGAGGTAACGCACTTTAA 171566 ||||| || || || |||| | || ||||| |||||| Sbjct 210477 TTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 210439 >seq44 Length=1175378 Score = 129 bits (142), Expect = 7e-25 Identities = 232/339 (68%), Gaps = 0/339 (0%) Strand=Plus/Minus Query 171228 GAAGAAACTTACAGTATGATTACAGCAAACAGATTCTGGTCACAGATATTTGGTATTGCT 171287 ||||||||||| ||| | || || ||| | || ||||| || || ||||| ||||| Sbjct 960176 GAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCT 960117 Query 171288 TTCTCTAACAAAAGATTTTTACACTTCCTTATGTTGTTCGTTCCTGTCATGGGTATGTGG 171347 || || || ||| | | ||||| ||| ||||||| || || || || | ||| | ||| Sbjct 960116 TTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGG 960057 Query 171348 ACATCATCTATAGGTATCGTAGGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCT 171407 | || | || | || ||||| || | ||||| | || || || || || || Sbjct 960056 ATGAGTGCTCTTGGAGTAGTCGGTCTGGCTTTGAACCTACGTGCCTATGACTTCGTTTCC 959997 Query 171408 CAAGAGATAAGAGCAGCAGAAGACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTT 171467 || || || | ||||| ||||| || || || || ||||| ||||| || ||||| || Sbjct 959996 CAGGAAATCCGTGCAGCTGAAGATCCTGAATTTGAAACTTTTTACACCAAAAATATTCTC 959937 Query 171468 CTTAATGAAGGTATGAGAGCATGGATGTCATCAGTTGACCAACCACATGAGAACTTCGTA 171527 | || || ||||| | || |||||| | | || || || ||||| ||| | || Sbjct 959936 TTAAACGAGGGTATCCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATA 959877 Query 171528 TTCCCAGAAGAAGTGTTACCAAGAGGTAACGCACTTTAA 171566 ||||| || || || |||| | || ||||| |||||| Sbjct 959876 TTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 959838 >seq2654 Length=55950 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 153746 TGATATTGCTGTAGGTAGTATGC--AAAGGTTTGGTATTCCTATGGGATATGGAGGTCCT 153803 |||||||| ||| || || ||| |||| |||||| | |||||||| |||||||||||| Sbjct 46281 TGATATTGTTGTTGG--GTCTGCTCAAAGATTTGGTGTGCCTATGGGGTATGGAGGTCCT 46338 Query 153804 CATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTA 153863 |||||||| ||||| || || | | |||| ||||| ||| || || |||||| | Sbjct 46339 CATGCTGCTTTCTTGGCTACTTCTCAAGAGTACAAGAGGTTGATGCCAGGAAGAATTATC 46398 Query 153864 GGTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAG 153923 |||| || ||| | || || || | | ||| | || || || ||| Sbjct 46399 GGTCTTAGCGTTGATTCTTCTGGCAAGTCTGCTCTTCGTATGGCAATGCAAACAAGGGAG 46458 Query 153924 CAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGG 153972 || ||||| | ||||| || || || || |||||||| || ||||||| Sbjct 46459 CAACATATTCGAAGAGATAAGGCTACTAGCAACATCTGTACTGCTCAGG 46507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578646170598080