Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27]
78,262 sequences; 869,795,571 total letters
Query= NC_015286.1
Length=175230
Score E
Sequences producing significant alignments: (Bits) Value
seq34 600 1e-166
seq885 497 1e-135
seq52 437 1e-117
seq119 297 2e-75
seq116 230 3e-55
seq44 226 3e-54
seq1508 208 9e-49
seq219 199 4e-46
seq122 152 6e-32
seq785 125 8e-24
seq1 123 3e-23
seq241 120 3e-22
>seq34
Length=1960455
Score = 600 bits (664), Expect = 1e-166
Identities = 739/1004 (74%), Gaps = 6/1004 (1%)
Strand=Plus/Plus
Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554
||||||||| | |||| ||||| |||||||| ||||||||||| || | || |||
Sbjct 370149 GATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 370208
Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614
|| ||||||| | || | || |||||| |||| || || | || || || |||
Sbjct 370209 CCTTGTGCTTATTTCGCCTTAGGGGGTTGGTTTACGGGTACAACCTTTGTAACTTCATGG 370268
Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGC-GCAAACTTTCTTA-CTGCGGCAG 168672
||||| || || ||||| ||||| ||| |||| ||| |||| ||||||| | || ||||
Sbjct 370269 TATACCCATGGATTGGCCAGTTCTTATTTGGAAGGCTGCAA--TTTCTTAACCGCAGCAG 370326
Query 168673 TTAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCAC 168732
|| |||||| || || | | | || ||| | || | || ||||||||||| ||||
Sbjct 370327 TTTCTACTCCTGCTAATAGTTTAGCCCACTCTTTATTGTTACTGTGGGGTCCTGAAGCAC 370386
Query 168733 AAGGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACG 168792
|||||||||| | ||||||||| | || || || ||||||||||| || || || |
Sbjct 370387 AAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGCCTGTGGGCTTTTGTTGCTCTTCATG 370446
Query 168793 GGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGT 168851
| |||||||| ||||| ||||| ||| | ||||| || ||||| || || ||| || |
Sbjct 370447 GTGCTTTCGCACTAATAGGTTTTATGTTACGTCAATTCGAACTTGCTCGGTCTGTTCAAT 370506
Query 168852 ATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTT 168911
| || || || ||||| || || ||||||||||| || |||||||||||| || ||
Sbjct 370507 -TGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTC 370565
Query 168912 CTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCA 168971
|| || || | || |||||||| ||||||| || || || ||| || || ||||
Sbjct 370566 CTGATTTATGCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCT 370625
Query 168972 ATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCAT 169031
|| ||||||||| ||||||| | ||||| || ||||| ||||| ||||| |||||||||
Sbjct 370626 ATATTCCGATTCATTCTCTTTTTTCAAGGGTTTCATAATTGGACGCTGAACCCATTTCAT 370685
Query 169032 ATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACA 169091
|||||||| || || ||| | ||||| | || |||| | || |||||||||| |||
Sbjct 370686 ATGATGGGAGTTGCCGGTGTATTGGGCGTCGCTCTGCTATGCGCTATTCATGGTGCTACC 370745
Query 169092 GTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGC 169151
|| || |||||| | | | |||||||||| |||||||| ||| | ||| ||
Sbjct 370746 GTTGAAAATACTTTATTTGAAGATGGTGATGGGGCAAATACATTCCGGACTTTTAACCCA 370805
Query 169152 ACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTT 169211
|| || | || || || ||||||||||| || || ||||| || ||||| || ||||||
Sbjct 370806 ACCCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTT 370865
Query 169212 GGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATG 169271
|| |||| || ||||| | ||||| |||||||||||| | ||||| || || |
Sbjct 370866 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACC 370925
Query 169272 GGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGAC 169331
||| | |||| ||| | | || | | ||||| ||| | ||||| ||||| ||||||
Sbjct 370926 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTTTGAACCTACGTGCCTATGAC 370985
Query 169332 TTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAG 169391
|| |||||||| || ||| | ||||| |||||||| || ||||| || || ||||||||
Sbjct 370986 TTCGTTTCCCAGGAAATCCGTGCAGCTGAAGATCCTGAATTTGAAACTTTTTACACCAAA 371045
Query 169392 AACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAG 169451
|| || ||||| ||||| ||| | ||||| ||| | || || ||||| ||||||||
Sbjct 371046 AATATTCTCTTAAACGAGGGTATCCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 371105
Query 169452 AACTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495
||| || | ||||||||||| || || ||||| || || || ||
Sbjct 371106 AACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 371149
>seq885
Length=390276
Score = 497 bits (550), Expect = 1e-135
Identities = 742/1056 (70%), Gaps = 59/1056 (6%)
Strand=Plus/Minus
Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554
||||||||| | |||| ||||| |||||||| ||||||||||| || | || |||
Sbjct 345696 GATGACTGGTTACGGAGGGACCGTTTTGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 345637
Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614
|| ||||| | || | || || ||| |||| || || | || || || |||
Sbjct 345636 CCTTGCACTTATTTCGCCTTAGGGGGATGGTTTACGGGTACAACCTTTGTAACTTCATGG 345577
Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGC-GCAAACTTTCTTA-CTGCGGCAG 168672
||||| || || ||||| ||||| ||| |||| ||| |||| ||||||| | || ||||
Sbjct 345576 TATACCCATGGATTGGCCAGTTCTTATTTGGAAGGCTGCAA--TTTCTTAACCGCAGCAG 345519
Query 168673 TTAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCAC 168732
|| |||||| || || | | | || ||| | || | || ||||||||||| ||||
Sbjct 345518 TTTCTACTCCTGCTAATAGTTTAGCCCACTCTTTATTGTTACTGTGGGGTCCTGAAGCAC 345459
Query 168733 AAGGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACG 168792
|||||||||| | ||||||||| | || || || ||||||||||| || || || |
Sbjct 345458 AAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGCCTGTGGGCTTTTGTTGCTCTTCATG 345399
Query 168793 GGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGT 168851
| |||||||| | ||| ||||| ||| | ||||| || ||||| || || ||| || |
Sbjct 345398 GTGCTTTCGCACCAATAGGTTTTATGTTACGTCAATTCGAACTTGCTCGGTCTGTTCAAT 345339
Query 168852 ATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTT 168911
| || || || ||||| || || ||||||||||| || |||||||||||| || ||
Sbjct 345338 -TGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTC 345280
Query 168912 CTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCA 168971
|| || || || || |||||||| ||||||| || || || ||| || || ||||
Sbjct 345279 CTGATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCT 345220
Query 168972 ATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCAT 169031
|| ||||||||| ||||||| | ||||| || ||||| ||||| ||||| |||||||||
Sbjct 345219 ATATTCCGATTCATTCTCTTTTTTCAAGGGTTTCATAATTGGACGCTGAACCCATTTCAT 345160
Query 169032 ATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACA 169091
|||||||| || || ||| | ||||| | || |||| | || |||||||||| |||
Sbjct 345159 ATGATGGGAGTTGCCGGTGTATTGGGCGCCGCTCTGCTATGCGCTATTCATGGTGCTACC 345100
Query 169092 GTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGC 169151
|| | |||||| | | | |||||||||| |||||||| ||| || ||| ||
Sbjct 345099 GTTAAAAATACTTTATTTGAAGATGGTGATGGGGCAAATACATTCCGGGCGTTTAACCCA 345040
Query 169152 ACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTT 169211
|| || | || || || ||||||||||| || || ||||| || ||||| || ||||||
Sbjct 345039 ACCCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTT 344980
Query 169212 GGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCC---TG-- 169266
|| |||| || ||||| | ||||| |||||||||||| | ||||| || ||
Sbjct 344979 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCANTTGCT 344920
Query 169267 ----------------------------TTATGGGTCTTTGGACAAGT----------TC 169288
|||| | | |||| || ||| |
Sbjct 344919 TTTTCCAATAAACGTTGGTTACATTTCTTTAT-GTTATTTGTACCAGTAACCGGTTTATG 344861
Query 169289 CATCGGTATTATTGG---------TCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTC 169339
|| || | |||| ||| ||| | ||||| ||||| ||||||||||||||
Sbjct 344860 TATGAGTGCTCTTGGAGTAGTCGGTCTGGCTTTGAACCTACGTGCCTATGACTTTGTTTC 344801
Query 169340 CCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAACATCCT 169399
||| || ||| | ||||| |||||||| || ||||| || || |||||||| || || ||
Sbjct 344800 CCAGGAAATCCGTGCAGCTGAAGATCCTGAATTTGAAACTTTTTACACCAAAAATATTCT 344741
Query 169400 CTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAACTTTGT 169459
||| ||||| ||| | ||||| ||| | || || ||||| |||||||| ||| || |
Sbjct 344740 CTTAAACGAGGGTATCCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTAT 344681
Query 169460 GTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495
||||||||||| || || ||||| || || || ||
Sbjct 344680 ATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 344645
Score = 86.0 bits (94), Expect = 7e-12
Identities = 101/133 (76%), Gaps = 4/133 (3%)
Strand=Plus/Plus
Query 168612 TGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGC-GCAAACTTTCTTA-CTGCGG 168669
|||||||| || || ||||| ||||| ||| |||| ||| |||| ||||||| | || |
Sbjct 171053 TGGTATACCCATGGATTGGCCAGTTCTTATTTGGAAGGCTGCAA--TTTCTTAACCGCAG 171110
Query 168670 CAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGG 168729
||||| |||||| || || | | | || ||| | || | || ||||||||||| |
Sbjct 171111 CAGTTTCTACTCCTGCTAATAGTTTAGCCCACTCTTTATTGTTACTGTGGGGTCCTGAAG 171170
Query 168730 CACAAGGGGATTT 168742
|||||||||||||
Sbjct 171171 CACAAGGGGATTT 171183
>seq52
Length=1114353
Score = 437 bits (484), Expect = 1e-117
Identities = 531/721 (74%), Gaps = 2/721 (0%)
Strand=Plus/Minus
Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146
||| || ||||| | |||| || | | |||||||| || | || ||||| || ||| |
Sbjct 279555 CTTCTGTAATTGGATAACCAACATTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 279496
Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205
||||||| |||| || | | ||||| ||||| || || || |||||| | | | |||
Sbjct 279495 GATGATCTCTACCTTATTGACTGCAACT-TCTGTATTTATTATAGCCTTCATTGCTACTC 279437
Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265
|||| || || || |||||||| || ||||| ||| | || || || | || || || |
Sbjct 279436 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCCGGATCTCTACTTTACGGAAATA 279377
Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325
| || || | ||||| || ||||| |||||| ||||| || | ||||| ||||| |
Sbjct 279376 ATATTATTTTGGGTGCCATTATTCCTACTTCTACAGCTATAGGGTTGCACTTTTATCCAA 279317
Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385
| |||||||| ||| | | || |||||||| |||||||||||||||| |||| | |
Sbjct 279316 TATGGGAAGCGGCATCGGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAACTAATTG 279257
Query 167386 TTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACC 167445
|| | |||||| | |||| | | ||||||||||||||||||||||| || ||
Sbjct 279256 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 279197
Query 167446 GTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTG 167505
|||| |||||||| || ||||| ||||||||| || |||||||| || | || |||
Sbjct 279196 GTCTAGGTATGCGCCCTTGGATTGCTGTTGCATATTCCGCTCCAGTTGCAGTGGCTACTG 279137
Query 167506 CTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTA 167565
|||| ||| | |||| || |||||||||| || ||||| | |||||||| | |
Sbjct 279136 CTGTTTTCTTGATCTACCCAATCGGTCAAGGAAACTTTTCTGATGGTATGCCTCTATGAA 279077
Query 167566 TCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 167625
||||||||| ||||||| ||| || | ||||| || ||| |||||||||| |||||||
Sbjct 279076 TCTCTGGTAATTTCAACTTTATGATTATATTCCAGGCTGAGAACAACATCCTTATGCACC 279017
Query 167626 CCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACG 167685
| || || ||| | || || | ||| |||||||| || || || || ||||| ||||| |
Sbjct 279016 CATTTCACATGTTAGGTGTAGTTGGTGTATTCGGTGGCTCCCTATTTAGTGCTATGCATG 278957
Query 167686 GTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATG 167745
|||| |||| || ||| || || | |||||||| ||| ||| || || | |
Sbjct 278956 GTTCCTTGGTAACTTCTAGTTTGATTAGGGAAACCACATAAAATGAATCTGCTAATGAAG 278897
Query 167746 GTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCG 167805
|||||| |||||||| || ||||| || ||||| ||||| |||||||||||||| || |
Sbjct 278896 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTG 278837
Query 167806 G 167806
|
Sbjct 278836 G 278836
>seq119
Length=805478
Score = 297 bits (328), Expect = 2e-75
Identities = 436/617 (71%), Gaps = 14/617 (2%)
Strand=Plus/Plus
Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146
||| || ||||| | |||| |||| | |||||||| || | || |||| || |||
Sbjct 179431 CTTCTGTAATTGGATAACCAACACTGAAAACCGTCTTTACATTGGACGGTTTGGTGTTTC 179490
Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGTTTC-ATCATCGCCTTCGTCGGTGCTC 167205
||||||||||| || | | ||||| ||||| || || || |||||| |
Sbjct 179491 TATGATCCCTACCTTATTGACTGCAACT-TCTGTATCCATTATAGCCTTCAT-------- 179541
Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265
||| || || |||||||| || ||||| || | || || || | || | || |
Sbjct 179542 ----TGTTGATATTGATGGTATTCGTGAACCTGTGTCCGGATCTCTACTTTACTGAAATA 179597
Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325
| || || || | ||| || ||||| ||||| ||||| || ||||| ||||| |
Sbjct 179598 ATATTATTTCGGCTGCCATTATTCCTACTTCTGCAGCTATAGGGTGGCACTTTTATCCAA 179657
Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385
| |||||||| || | | || |||||||| |||||||||||||||| ||| | |
Sbjct 179658 TATGGGAAGCGACATCGGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAACAAATTG 179717
Query 167386 TTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACC 167445
|| | |||||| | |||| | | |||||||||| |||||||||||| || ||
Sbjct 179718 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCATGAGTGGGAACTTAGTTTCC 179777
Query 167446 GTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTG 167505
|| | |||||||| || | || ||||||||| || |||||||| || | | | |||
Sbjct 179778 GTTTAGGTATGCGCCCTTATATTGCTGTTGCATATTCCGCTCCAGTTGCAGTACCTACTG 179837
Query 167506 CTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTA 167565
|||| ||| | |||| || ||| |||||| | | ||||| | |||||||| || |
Sbjct 179838 CTGTTTTCTTGATCTACCCAATCGATCAAGGAACCTATTCTGATGGTATGCCTCTAGGAA 179897
Query 167566 TCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 167625
|||| | ||| ||||||| || |||| ||||| || |||||||||||||| ||||||
Sbjct 179898 TCTCCGATACTTTCAACTTTGTGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACT 179957
Query 167626 CCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACG 167685
| || || ||| | || || |||| ||||||||||| || || || ||||| ||||| |
Sbjct 179958 CATTTCACATGTTAGGTGTACCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATG 180017
Query 167686 GTTCTCTGGTTACCTCT 167702
|||| || || || |||
Sbjct 180018 GTTCCCTTGTAACTTCT 180034
Score = 183 bits (202), Expect = 3e-41
Identities = 233/330 (71%), Gaps = 0/330 (0%)
Strand=Plus/Plus
Query 167745 GGTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTC 167804
||||||| |||||||| || | ||| || ||||| ||||| |||||||||||||| ||
Sbjct 240430 GGTTACAGATTCGGTCAAGAGGGAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTT 240489
Query 167805 GGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTG 167864
||||| ||||||||||||| || ||||||||||| || || | |||||||||||
Sbjct 240490 GGTCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTA 240549
Query 167865 GCAGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTC 167924
|| || |||||||| || ||||| |||| |||
Sbjct 240550 GCTGCTTGGCCTGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATCGATTTC 240609
Query 167925 AACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCT 167984
|| | || |||||||| |||||||| ||| | |||||||| ||| || | |
Sbjct 240610 AAGTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAAT 240669
Query 167985 ACTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAAT 168044
|||||||| || | | |||||| || || | |||| |||||||||| || ||||||
Sbjct 240670 ACTTGGGCTGATATCATTAACCGTCCTAACCTTGATATGTAAGTTATGCATGAACGTAAT 240729
Query 168045 GCTCACAACTTCCCTCTCGACCTTGCTGCT 168074
||||| ||||||||||| ||||| | ||||
Sbjct 240730 GCTCATAACTTCCCTCTAGACCTAGATGCT 240759
>seq116
Length=804226
Score = 230 bits (254), Expect = 3e-55
Identities = 252/335 (75%), Gaps = 0/335 (0%)
Strand=Plus/Minus
Query 169161 GAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTGGTATTGCG 169220
|| || || ||||||||||| || || ||||| || ||||| || |||||||| ||||
Sbjct 210777 GAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCT 210718
Query 169221 TTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGG 169280
|| ||||| | ||||| |||||||||||| | ||||| || || | ||| |||||
Sbjct 210717 TTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTTTGG 210658
Query 169281 ACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCC 169340
| ||| | | || | | ||||| ||| | ||||| ||||| |||||||| ||||||
Sbjct 210657 ATGAGTGCTCTTGGAGTAGTCGGTCTGGCTTTGAACCTACGTGCCTATGACTTCGTTTCC 210598
Query 169341 CAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAACATCCTC 169400
|| || ||| | ||||| |||||||| || ||||| || || |||||||| || || |||
Sbjct 210597 CAGGAAATCCGTGCAGCTGAAGATCCTGAATTTGAAACTTTTTACACCAAAAATATTCTC 210538
Query 169401 TTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAACTTTGTG 169460
|| ||||| ||| | ||||| ||| | || || ||||| |||||||| ||| || |
Sbjct 210537 TTAAACGAGGGTATCCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATA 210478
Query 169461 TTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495
||||||||||| || || ||||| || || || ||
Sbjct 210477 TTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 210443
>seq44
Length=1175378
Score = 226 bits (250), Expect = 3e-54
Identities = 251/335 (75%), Gaps = 0/335 (0%)
Strand=Plus/Minus
Query 169161 GAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTGGTATTGCG 169220
|| || || ||||||||||| || || ||||| || ||||| || |||||||| ||||
Sbjct 960176 GAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCT 960117
Query 169221 TTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGG 169280
|| ||||| | ||||| |||||||||||| | ||||| || || | ||| | |||
Sbjct 960116 TTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGG 960057
Query 169281 ACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCC 169340
| ||| | | || | | ||||| ||| | ||||| ||||| |||||||| ||||||
Sbjct 960056 ATGAGTGCTCTTGGAGTAGTCGGTCTGGCTTTGAACCTACGTGCCTATGACTTCGTTTCC 959997
Query 169341 CAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAACATCCTC 169400
|| || ||| | ||||| |||||||| || ||||| || || |||||||| || || |||
Sbjct 959996 CAGGAAATCCGTGCAGCTGAAGATCCTGAATTTGAAACTTTTTACACCAAAAATATTCTC 959937
Query 169401 TTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAACTTTGTG 169460
|| ||||| ||| | ||||| ||| | || || ||||| |||||||| ||| || |
Sbjct 959936 TTAAACGAGGGTATCCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATA 959877
Query 169461 TTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495
||||||||||| || || ||||| || || || ||
Sbjct 959876 TTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 959842
>seq1508
Length=419047
Score = 208 bits (230), Expect = 9e-49
Identities = 254/344 (74%), Gaps = 2/344 (1%)
Strand=Plus/Minus
Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146
||| || ||||| | ||||||||| | |||||||| || | || ||||| || ||| |
Sbjct 272757 CTTCTGTAATTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 272698
Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205
|||||||||||| || | | ||||| ||||| || || || |||||| | | |||||
Sbjct 272697 GATGATCCCTACCTTATTGACTGCAACT-TCTGTATTTATTATAGCCTTCATTGCTGCTC 272639
Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265
|||| || || || |||||||| || ||||| ||| | || || || | || || || |
Sbjct 272638 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCCGGATCTCTACTTTACGGAAATA 272579
Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325
| || || || ||||| || ||||| ||||| ||||| || | ||||| ||||| |
Sbjct 272578 ATATTATTTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGGTTGCACTTTTATCCAA 272519
Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385
|||||||||| ||| | | || |||||||| |||||||||||||||| |||| | |
Sbjct 272518 TCTGGGAAGCGGCATCGGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAACTAATTG 272459
Query 167386 TTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAG 167429
|| | |||||| | |||| | | |||||||||||||||
Sbjct 272458 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAG 272415
>seq219
Length=449544
Score = 199 bits (220), Expect = 4e-46
Identities = 237/319 (74%), Gaps = 2/319 (1%)
Strand=Plus/Minus
Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146
||| || ||||| | ||||||||| | |||||||| || | || ||||| || ||| |
Sbjct 176450 CTTCTGTAATTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 176391
Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205
|||||||||||| || | | ||||| ||||| || || || |||||| | | |||||
Sbjct 176390 GATGATCCCTACCTTATTGACTGCAACT-TCTGTATTTATTATAGCCTTCATTGCTGCTC 176332
Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265
|||| || || || |||||||| || ||||| ||| | || || || | || || || |
Sbjct 176331 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCCGGATCTCTACTTTACGGAAATA 176272
Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325
| || || || ||||| || ||||| ||||| ||||| || | ||||| ||||| |
Sbjct 176271 ATATTATTTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGGTTGCACTTTTATCCAA 176212
Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385
|||||||||| ||| | | || |||||||| |||||||||||||||| |||| | |
Sbjct 176211 TCTGGGAAGCGGCATCGGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAACTAATTG 176152
Query 167386 TTTTCCACTTCCTGATTGG 167404
|| | |||||| | ||||
Sbjct 176151 TTCTACACTTCTTACTTGG 176133
Score = 107 bits (118), Expect = 2e-18
Identities = 125/166 (75%), Gaps = 2/166 (1%)
Strand=Plus/Minus
Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146
||| || ||||| | ||||||||| | |||||||| || | || ||||| || ||| |
Sbjct 175196 CTTCTGTAATTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 175137
Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205
|||||||||||| || | | |||| | ||||| || || || |||||| | | |||||
Sbjct 175136 GATGATCCCTACCTTATTGACTGCAA-CTTCTGTATTTATTATAGCCTTCATTGCTGCTC 175078
Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACT 167251
|||| || || || |||||||| || ||||| ||| | || || ||
Sbjct 175077 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCCGGATCTCT 175032
>seq122
Length=796376
Score = 152 bits (168), Expect = 6e-32
Identities = 168/224 (75%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 169227 AATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGT 169286
||||| | ||||| |||||||||||| | ||||| || || | ||| | |||| |||
Sbjct 296631 AATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGT 296572
Query 169287 TCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAG 169346
| | || | | ||||| ||| | ||||| ||||| |||||||| |||||||| ||
Sbjct 296571 GCTCTTGGAGTAGTCGGTCTGGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAA 296512
Query 169347 ATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAACATCCTCTTGAAC 169406
||| | ||||| |||||||| || ||||| || || |||||||| || || ||||| |||
Sbjct 296511 ATCCGTGCAGCTGAAGATCCTGAATTTGAAACTTTTTACACCAAAAATATTCTCTTCAAC 296452
Query 169407 GAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGA 169450
|| ||| | ||||| ||| | || || ||||| ||||||||
Sbjct 296451 GAGGGTATCCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGA 296408
>seq785
Length=740511
Score = 125 bits (138), Expect = 8e-24
Identities = 162/220 (74%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 168612 TGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGC-GCAAACTTTCTTA-CTGCGG 168669
|||||||| || || ||||| ||||| ||| |||| ||| |||| ||||||| | ||
Sbjct 114961 TGGTATACCCATGGATTGGCCAGTTCTTATTTGGAAGGCTGCAA--TTTCTTAACCGCAA 115018
Query 168670 CAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGG 168729
||||| |||||| || || | | | || ||| | || | || ||||||||| |
Sbjct 115019 CAGTTTTTACTCCTGCTAATAGTTTAGTCCACTCTTTATTGTTACTGGAGGGTCCTGAAG 115078
Query 168730 CACAAGGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCC 168789
||||||||||||| | ||||||||| | || || | ||||||||||| || || |
Sbjct 115079 CACAAGGGGATTTTACTTGTTGGTGTCAATTAGGTGGCATGTGGGCTTTTGTTGCTCTTC 115138
Query 168790 ACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTT 168829
| || |||||||| ||||| ||||| ||| | ||||| ||
Sbjct 115139 ATGGTGCTTTCGCACTAATAGGTTTTATGTTACGTCAATT 115178
>seq1
Length=3292865
Score = 123 bits (136), Expect = 3e-23
Identities = 119/153 (78%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 167922 TTCAACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTG 167981
|||||| | || |||||||| |||||||| ||| | |||||||| ||| || |
Sbjct 1433736 TTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATT 1433677
Query 167982 CCTACTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGT 168041
||||||||| || | | ||||||||| || ||||||||||||||||| || |||
Sbjct 1433676 AATACTTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGT 1433617
Query 168042 AATGCTCACAACTTCCCTCTCGACCTTGCTGCT 168074
|||||||| ||||||||||| ||||| ||||||
Sbjct 1433616 AATGCTCATAACTTCCCTCTAGACCTAGCTGCT 1433584
>seq241
Length=418655
Score = 120 bits (132), Expect = 3e-22
Identities = 177/248 (71%), Gaps = 2/248 (1%)
Strand=Plus/Minus
Query 168975 TTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATATG 169034
||||||||| ||| || | ||||| ||| |||| | ||| |||| ||||||||||||
Sbjct 82013 TTCCGATTCACTCTTTTTTTTCAAGGTTTC-ATAATTAGACGATGAACCCATTTCATATG 81955
Query 169035 ATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGTA 169094
||||| || || ||| | ||||| | || || | | | ||||||||| ||| ||
Sbjct 81954 ATGGGAGTTGCCGGTGTATTGGGCGCCGCTCTGTTATGCGTTATTCATGGTTCTACGGTT 81895
Query 169095 GAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGCACT 169154
|| |||||| | | | |||||||||| |||||||| ||| | ||| | ||
Sbjct 81894 GAAAATACTTTATTTGAAGATGGTGATGGGGCAAATACATTCCGGACTTTTAATCCAACC 81835
Query 169155 CAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTGGT 169214
|| || | || || ||||||||||| || || ||||| || || || || ||||||||
Sbjct 81834 CAAGATGGAGAAACTTATTCAATGGTCACCGCTAACCGCTT-TGATCCCAAATCTTTGGG 81776
Query 169215 ATTGCGTT 169222
|||| ||
Sbjct 81775 GTTGCTTT 81768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 560059571208800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |