Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq40 181 1e-39 seq66 178 2e-38 >seq40 Length=1826671 Score = 181 bits (200), Expect = 1e-39 Identities = 208/278 (75%), Gaps = 5/278 (2%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||||||||| || |||||||| ||||||||||| ||||| | | ||||||| || | Sbjct 1766490 CCGAGTGGATGTTTTCAATGGCGATTTGGAAGCCGTAGAAGGCGCGCGCCTCTGCTACCT 1766431 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 |||| || |||||||| | ||||| || || ||| ||||||||||| |||||||| Sbjct 1766430 GGACGTCTTTCATGAATCTTCCGGCGAGATTTTCGAGGACGATGCCGTCAGAGGCGGCGA 1766371 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGA----CACCCAG 869806 | || || |||| ||| |||| ||||| |||||||| || |||| || ||||| Sbjct 1766370 AGAAGGCGAGGATGTGGGTGATGAAGTGTTGCTCGTCGGCGGTGAG-GATGTTTTCCCAG 1766312 Query 869807 TGGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTT 869866 ||| | |||| | ||| || || || || |||||||||| ||||| || || || Sbjct 1766311 TGGCGGTTGTCCTCTGAGAGATCGACTTCTTCCGCGGTCCAGAAGGAGGCTTCAGCTTTC 1766252 Query 869867 TTGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904 |||||||| ||||| | ||| | || ||| ||||| Sbjct 1766251 TTGTACATTTCCCAGATTTGTGGATATTTGATTGGGAA 1766214 >seq66 Length=1001823 Score = 178 bits (196), Expect = 2e-38 Identities = 207/276 (75%), Gaps = 5/276 (2%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||||||| ||||| || || ||||| ||||| ||||| | | |||| || || ||| Sbjct 952802 GAGTGGATGTTTTCGATTGCTATTTGGAACCCGTAGAAGGCGCGCGCCTCAGCAACCTGG 952743 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||||||| | |||||| || || || || ||||||||| ||||||||| Sbjct 952742 ACCTCTTTCATGAATCTGCCGGCGAGATTTTCTAGGACTATGCCGTCGGAGGCGGCGAAG 952683 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGG 869809 || || |||| || |||||||||| |||||||| || ||||| | |||| | | Sbjct 952682 AAGGCGAGGATATGGGTGATAAAGTGTTGCTCGTCGGCGGTGAGCGCGGTTTCCCAAT-G 952624 Query 869810 ACGG-TGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTT 869868 |||| |||| |||||| || || || || ||||||| ||||| || ||||| || Sbjct 952623 ACGGTTGTCTTGTGAGAGGTCTACTTCTTCCGCTGTCCAGAAGGAGGCTTCAGCCTTCTT 952564 Query 869869 GTACATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904 |||||||||||| | ||| |||| ||| ||||| Sbjct 952563 GTACATCTCCCAGATTTGTGGGTATTTGATTGGGAA 952528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6100716653779054