Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq329 138 2e-27 seq37 91.5 2e-13 >seq329 Length=298387 Score = 138 bits (152), Expect = 2e-27 Identities = 166/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || | || || || || |||||| |||| || ||| | | Sbjct 180086 TGCAGATCTTTGTTAAGACCCTTACTGGTAAGACCATTACTCTTGAGGTTGAAACTTCTG 180145 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| || | || || || ||||||||| ||| |||| ||||||| Sbjct 180146 ACACGATTGAAAATGTTAAGACCAAGATTCACGATAAAGAAGGTATTGCACCTGATCAAC 180205 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||||||||| ||||| || ||||| ||||| ||| |||||| | |||| ||||||| Sbjct 180206 AAAGACTCATCTTTGCTGGGAAACAGTTAGAGGATGGTAGAACTCTTGCAGACTATAATA 180265 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||| || || ||| | ||||| ||| | || || ||||| || Sbjct 180266 TTCAAAAGGAGTCTACTCTGCATTTGGTACTTCGTTTGAGAGGTGG 180311 Score = 105 bits (116), Expect = 1e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || ||| | || ||||| || |||||| | || || ||| | | Sbjct 180314 TGCAAATCTTTGTGAAGACACTTACTGGAAAGACGATTACTTTGGAAGTGGAAAGTTCAG 180373 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || | ||| || || |||||| || || ||||| ||||| | Sbjct 180374 ATACAATTGATAATGTTAAGACTAAGATTCAGGATAAAGAGGGTATCCCACCAGATCAGC 180433 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | || ||||| || || ||||| || ||| ||||| || |||||||||||| Sbjct 180434 AGAGGATTATCTTTGCTGGGAAGCAATTGGAGGATGGGAGAACTTTGGCAGATTATAATA 180493 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | || || || || ||| | ||| Sbjct 180494 TTCAGAAGGAGTCTACTCTTCAT 180516 >seq37 Length=1785839 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| |||| |||||||| || || | || |||||| || Sbjct 885703 TGCAGATCTTCGTCAAAACCCTAACCGGAAAAACCATAACCCTAGAAGTAGAATCCTCCG 885762 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | || || ||| || || ||| ||||||||||| ||||| || |||| Sbjct 885763 ACACAATCGACAACGTCAAAGCCAAGATCCAAGACAAAGAAGGCATCCCACCGGACCAAC 885822 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | ||||| || || || ||||| || || ||| ||||| | | || || || | Sbjct 885823 AACGCCTCATCTTCGCCGGAAAACAGTTGGAAGATGGAAGAACACTTGCCGACTACAACA 885882 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || || ||||| ||| |||| || || Sbjct 885883 TCCAGAAGGAATCTACTCTCCACTTGGT 885910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785397313065040