Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq329 86.0 1e-11 >seq329 Length=298387 Score = 86.0 bits (94), Expect = 1e-11 Identities = 104/144 (72%), Gaps = 11/144 (8%) Strand=Plus/Minus Query 81637 CAAACACAGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA 81696 |||| ||||||| | ||||| || |||||||| || | |||||||||| || ||||| Sbjct 180291 CAAATGCAGAGTAGACTCCTTTTGAATATTATAGTCTGCAAGAGTTCTACCATCCTCTAA 180232 Query 81697 C-----------AAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAAT 81745 | |||||| |||||||||||| | || || |||| ||||| ||||| Sbjct 180231 CTGTTTCCCAGCAAAGATGAGTCTTTGTTGATCAGGTGCAATACCTTCTTTATCGTGAAT 180172 Query 81746 CTTTGCTTTTATATTTTCAATCGT 81769 ||| | || | |||||||||||| Sbjct 180171 CTTGGTCTTAACATTTTCAATCGT 180148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902527415408320