Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq539 91.5 3e-13 >seq539 Length=180840 Score = 91.5 bits (100), Expect = 3e-13 Identities = 131/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||||||||| || | || || |||||| | ||||| || ||||||||||| Sbjct 57688 CATTTGAATGATGGGGACTTTGTACTTTTCAATCGACAACCCAGTCTCCATAAAATGTCC 57747 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTAT--CTGGATTGACATTTCGATTAAATGTAAGTG 305426 || |||| ||| | | |||| ||||| | | || ||| |||| ||| | || Sbjct 57748 ATTATGGGTCACAGGAT-AAAG-ATTATGCCCTACTCTACTTTTAGATTGAATTTGTCTG 57805 Query 305427 CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAAT 305486 | ||||||| ||||| ||||||||||| ||||||||||| |||||||| ||||||| Sbjct 57806 TTACATCGCCTTACAATGCTGATTTTGATGGTGATGAAATGAACATGCATGTTCCTCAAT 57865 Query 305487 C 305487 | Sbjct 57866 C 57866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185622744975782