Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq810 86.0 6e-12 seq37 82.4 7e-11 >seq810 Length=562993 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || ||||| | || |||||| | ||||| ||||||||||| | Sbjct 115988 ATGCAGATCTTCGTGAAAACCCTCACTGGAAAAACCATCACCCTCGAAGTCGAAAGTTCC 115929 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || || ||||| ||||| |||||||| || || || ||| Sbjct 115928 GACACCATTGACAACGTCAAGGCTAAAATCCAAGATAAGGAGGGTATTCCCCCAGACCAG 115869 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||| || || | || ||| ||||| ||||| |||| ||| | | ||||||||| Sbjct 115868 CAAAGGCTGATCTTCGCCGGAAAACAGCTCGAGGATGGCCGAACTCTTGCCGATTACAAC 115809 Query 25355 ATTCAAAAAGAATCCAC 25371 || || || || || || Sbjct 115808 ATCCAGAAGGAGTCAAC 115792 >seq37 Length=1785839 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 25170 ACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAG 25229 |||| ||||| | || || ||||| ||||||||||| | || || | ||||| ||| Sbjct 885697 ACAAAATGCAGATCTTCGTCAAAACCCTAACCGGAAAAACCATAACCCTAGAAGTAGAAT 885756 Query 25230 CCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCG 25289 || ||| || ||||| | || ||| || || || ||||| || || || || | Sbjct 885757 CCTCCGACACAATCGACAACGTCAAAGCCAAGATCCAAGACAAAGAAGGCATCCCACCGG 885816 Query 25290 ATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATT 25349 | || ||| | ||||| | || ||| ||||| | ||||||| |||| | ||| | Sbjct 885817 ACCAACAACGCCTCATCTTCGCCGGAAAACAGTTGGAAGATGGAAGAACACTTGCCGACT 885876 Query 25350 ACAATATTCAAAAAGAATCCACCATTCATTTAGTG 25384 |||| || || || ||||| || | || || ||| Sbjct 885877 ACAACATCCAGAAGGAATCTACTCTCCACTTGGTG 885911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444658975275840