Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_027399.1 Length=346602 Score E Sequences producing significant alignments: (Bits) Value seq57 84.2 5e-11 >seq57 Length=1045227 Score = 84.2 bits (92), Expect = 5e-11 Identities = 132/184 (72%), Gaps = 5/184 (3%) Strand=Plus/Plus Query 48473 TGCTGGTACAAAATACCGTGGTGAATTCGAAGAACGTATGGAAGGTATT-ATTAAAGAAC 48531 |||||| || ||||||||||| ||||| || ||| | || |||| || || | ||| Sbjct 578226 TGCTGGAACTAAATACCGTGGAGAATTTGAGGAAAG-ATTGAAGAAGTTGATGGAGGAAA 578284 Query 48532 TTAAAAAACGAGAAAATGTAATTTTGTTCATTGATGAAGTACATATTATGATGGGTGCTG 48591 ||||| || | || | ||||||| || |||||||||||||||| | |||| || || | Sbjct 578285 TTAAACAAAGTGATGAAATAATTTTATTTATTGATGAAGTACATACTTTGATTGGGGCAG 578344 Query 48592 GTGGTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCACTTTCACGTG 48651 | | ||||| | ||| | || ||| || ||| ||||||| || ||| || | | Sbjct 578345 G-AGCAGCAGAA--GGAGCCATCGATGCTGCAAACATCTTGAAACCAGCTCTTGCAAGGG 578401 Query 48652 GTGA 48655 |||| Sbjct 578402 GTGA 578405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1107883175163738