Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq40 122 7e-23 >seq40 Length=1826671 Score = 122 bits (134), Expect = 7e-23 Identities = 431/665 (65%), Gaps = 15/665 (2%) Strand=Plus/Plus Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973 |||| || || || |||| || || || || || || ||||| ||||| ||||| | Sbjct 1766422 AAGACGTCCAGGTAGCAGAGGCGCGCGCCTTCTACGGCTTCCAAATCGCCATTGAAAACA 1766481 Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC 44033 | || ||||||||||| || || |||| || ||||||||||| || || Sbjct 1766482 TCCACTCGGAAATGTATTCCCTCCTCTTAGAAACCTACATCAAAGACTCCGACCTTAAAT 1766541 Query 44034 ATCGATTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCC 44092 | | || || || || || | || || | | || | |||||||| |||||| Sbjct 1766542 CCCACCTCTTCCGCGCAATCGAGACCATCCCCTGTG-TGAAGAAGAAAGCAGATTGGGCC 1766600 Query 44093 CTTAAATGGATAAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTG 44152 || |||||| | | || || || | ||| ||||| | || || || ||| Sbjct 1766601 CTCCGATGGATCGACGGAGCAGAATCCTTCGCCGAAAGACTTATTGCTTTCGCTTGTGTT 1766660 Query 44153 GAAGGCATTTTCTTTTCAGGATCGTT-TGCGGCCATATTTTGGTTAAAGAAACGAGGTTT 44211 ||||| |||||||| || ||| || ||| ||||||| ||| | || || || || || Sbjct 1766661 GAAGGGATTTTCTTCTCTGGAAGCTTCTGCT-CCATATTCTGGCTGAAAAAGCGCGGGTT 1766719 Query 44212 GATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGA 44271 ||||| || || || || ||||| ||||| ||| ||||||||||| | || || || Sbjct 1766720 AATGCCCGGATTAACCTTCTCAAACGAGTTGATATCGCGTGATGAAGGGCTTCACTGTGA 1766779 Query 44272 TTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTCATGT-AAGACAATTA 44330 |||||| |||||| || | | || | || || || || ||| ||| | || Sbjct 1766780 TTTTGCCTGCTTG----CTGTACAGCTTGTTGAAGAAAAAGCTAAGTGTGGAGAAAGTTC 1766835 Query 44331 CAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTG 44390 | || || | ||| || || ||| |||| ||||| |||| | | || | Sbjct 1766836 AGGCAATAGTGGAAGAAGCGGTGGCGATCGAACGCGAATTCGTGACGGATTCGCTGCCGG 1766895 Query 44391 TAAATTTAATAGGAATGAA---TGAACTTTTGATGAACCAATATATTGAATACATTGCAG 44447 |||| | |||| ||||| ||| ||| |||| || || ||||| | |||| | Sbjct 1766896 TAAAGCTGGTAGGGATGAACTGTGAGCTT---ATGAGTCAGTACATTGAGTTTGTTGCTG 1766952 Query 44448 ATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATT 44507 || | || | | ||| || || | ||| || ||| |||||| ||||||| Sbjct 1766953 ATAGATTGTTAGCTGCACTTGGGTGTGGTAAGGTGTACGGTGTGGTAAACCCATTTGATT 1767012 Query 44508 TTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAAT 44567 ||||| ||||| | |||| || || ||||| ||||| || | ||||| |||| Sbjct 1767013 GGATGGAGTTGATTTCTCTTCAAGGGAAGACTAACTTCTTTGAGAAGAGAGTTGGGGAAT 1767072 Query 44568 ATCAG 44572 ||||| Sbjct 1767073 ATCAG 1767077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397076899263310