Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1474 93.3 4e-14 >seq1474 Length=462429 Score = 93.3 bits (102), Expect = 4e-14 Identities = 98/128 (77%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 34607 CAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATG 34666 || ||||| || || ||||| ||||| ||||| || | || || || || | ||||||| Sbjct 141347 CAGTTCTATGTAGCAAATGGTGAGCTATCCTGTCAAATGTACCAGCGGTCAGCAGACATG 141406 Query 34667 GGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCAT 34726 || || ||||| || || || ||||| ||| ||||| | ||||||||||| |||||| Sbjct 141407 GGTTTGGGGGTTCCCTTTAATATTGCATCTTATGCTCTCTTGACGTACATGATTGCTCAT 141466 Query 34727 GTC-GTGG 34733 ||| |||| Sbjct 141467 GTCTGTGG 141474 Score = 93.3 bits (102), Expect = 4e-14 Identities = 98/128 (77%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 6612 CCAC-GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACC 6670 |||| ||||||||| ||||||||||| | ||||| ||| ||||| || || || ||| Sbjct 141474 CCACAGACATGAGCAATCATGTACGTCAAGAGAGCATAAGATGCAATATTAAAGGGAACC 141415 Query 6671 CCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACG 6730 || || ||||||||| | || || || || | || ||||| ||||| ||||| || || Sbjct 141414 CCCAAACCCATGTCTGCTGACCGCTGGTACATTTGACAGGATAGCTCACCATTTGCTACA 141355 Query 6731 TAGAATTG 6738 ||||| || Sbjct 141354 TAGAACTG 141347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447823876100640