Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spinacia_20oleracea_20[genbank_20GCA_5F002007265.1_202017-02-27] 78,262 sequences; 869,795,571 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq40 95.1 1e-14 >seq40 Length=1826671 Score = 95.1 bits (104), Expect = 1e-14 Identities = 289/437 (66%), Gaps = 26/437 (6%) Strand=Plus/Minus Query 23217 TTTTTGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCTCTAATGATATAT 23275 ||| |||||||||||||| | |||| || || || || ||||| || | | || || Sbjct 1767080 TTTCTGATATTCCCCAACTC-TCTTCTCAAAGAAGTTAGTCTTCCCTTGAAGAGAAATCA 1767022 Query 23276 TTTCCATAAAATCAAATGGATTAGAAGTATTATA---TACAGCTTT--ACATGATAATTC 23330 ||||| |||||||||| || || | | |||| ||| ||| | | | Sbjct 1767021 ACTCCATCCAATCAAATGGGTT-----TACCACACCGTACACCTTACCACACCCAAGTGC 1766967 Query 23331 CTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACC 23390 ||| | ||||| || ||||| ||||| || |||| ||| | ||| |||| || || Sbjct 1766966 AGCTAACAATCTATCAGCAACAAACTCAATGTACTGACTCATAAGCTCACAGTTCATCCC 1766907 Query 23391 TATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTT 23450 || || ||||| || | || ||| | |||| ||| || | || || |||| Sbjct 1766906 TACCAGCTTTACCGGCAGCGAATCCGTCACGAATTCGCGTTCGATCGCCACCGCTTCTTC 1766847 Query 23451 AATTATT---TGAACAATAACTTCTTCACTAGGTGGATATTTT---AAATACTTAAACAA 23504 | |||| ||||| |||| ||| | | | | ||| || | | ||| Sbjct 1766846 CACTATTGCCTGAACT-----TTCTCCAC-ACTTAGCTTTTTCTTCAACAAGCTGTACAG 1766793 Query 23505 TAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGT 23564 || || ||||||||||| || || |||||||| | ||||| || || || || || Sbjct 1766792 CAAGCAGGCAAAATCACAGTGAAGCCCTTCATCACGCGATATCAACTCGTTTGAGAAGGT 1766733 Query 23565 TAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCA-AATGATCCGGAAA 23623 |||||| |||||||| || || ||||| | ||| |||| || |||| || ||| || | Sbjct 1766732 TAATCCGGGCATTAACCCGCGCTTTTTCAGCCAGAATA-TGGAGCAGAAGCTTCCAGAGA 1766674 Query 23624 AGAAAATACCCTCAACA 23640 ||||||| || |||||| Sbjct 1766673 AGAAAATCCCTTCAACA 1766657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520977841326800