Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tarenaya_20hassleriana_20[refseq_20GCF_5F000463585.1_202013-09-05]
12,249 sequences; 249,929,577 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq6636 102 6e-17
>seq6636
Length=1297912
Score = 102 bits (112), Expect = 6e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960
||||| |||| || ||||| || | ||||| |||| | ||| || |||| |||
Sbjct 787835 ACCAAGTGGAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCGAGTGTCCGACCGTCCTCC 787894
Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020
| ||| || ||||| || ||||||||||| || || | ||| | ||||| || || |||
Sbjct 787895 AGTTGCTTCCCGGCGAAGATCAATCGCTGCTGGTCCGGCGGGATTCCTTCCTTGTC-CTG 787953
Query 43021 -ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTT 43079
||| | || || || | | |||||| | |||||| |||| |||||||| ||
Sbjct 787954 AATCTTGGCCTTCACATTGTCGATCGTGTCGGAGGACTCGACCTCTAGGGTTATAGTCTT 788013
Query 43080 TCCGGTTAGAGTTTTCACAAAAATTTGCAtttt 43112
|| || || |||||||||||||| ||||| ||
Sbjct 788014 CCCCGTAAGGGTTTTCACAAAAATCTGCATCTT 788046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381312667358442
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |