Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tarenaya_20hassleriana_20[refseq_20GCF_5F000463585.1_202013-09-05]
12,249 sequences; 249,929,577 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq6695 152 4e-32
seq7521 118 9e-22
seq5186 116 3e-21
seq1 107 2e-18
seq7859 86.0 5e-12
>seq6695
Length=6602074
Score = 152 bits (168), Expect = 4e-32
Identities = 153/199 (77%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|||||||||| ||||| ||||| | ||||| || || ||||||| ||||| || |
Sbjct 809771 AGATGCAAATATTTGTGAAAACCCTCACCGGCAAGACCATCACTCTCGAAGTTGAGAGTT 809830
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || ||| | ||| || ||||| ||| || || |||||||| || ||||| || || |
Sbjct 809831 CGGACACCATTGACAATGTCAAAGCAAAGATCCAGGACAAGGAAGGAATTCCTCCGGACC 809890
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| ||| | ||||| ||||||||||||||| | |||||| ||||||| | |||| ||||
Sbjct 809891 AGCAAAGGCTTATCTTTGCCGGCAAACAGCTTGAGGATGGCCGCACCTTGGCCGACTACA 809950
Query 22397 ACATTCAAAAAGAATCCAC 22415
|||| ||||| ||||| ||
Sbjct 809951 ACATCCAAAAGGAATCGAC 809969
Score = 147 bits (162), Expect = 2e-30
Identities = 152/199 (76%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|||||||||| ||||| ||||| | ||||| || || ||||||| ||||| || |
Sbjct 804639 AGATGCAAATATTTGTGAAAACCCTCACCGGCAAGACCATCACTCTCGAAGTTGAGAGTT 804698
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || ||| | ||| || ||||| ||| || || |||||||| || || || || || |
Sbjct 804699 CGGACACCATTGACAATGTCAAAGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGACC 804758
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| ||| | ||||| ||||||||||||||| | |||||| ||||||| | |||| ||||
Sbjct 804759 AGCAAAGGCTTATCTTTGCCGGCAAACAGCTTGAGGATGGCCGCACCTTGGCCGACTACA 804818
Query 22397 ACATTCAAAAAGAATCCAC 22415
|||| ||||| ||||| ||
Sbjct 804819 ACATCCAAAAGGAATCGAC 804837
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | ||||| |||||| |||| || || || || | | |
Sbjct 810229 ATGCAGATCTTCGTGAAGACTCTTACCGGCAAAACGATCACCCTCGAGGTTGAGAGCTCT 810288
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | | || ||| || || |||||||| || || || || || ||
Sbjct 810289 GATACCATTGACAACGTGAAGGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCAG 810348
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | ||||| ||||| ||||||||| | ||||| | ||| | | ||||||||
Sbjct 810349 CAAAGGCTTATCTTTGCTGGCAAACAGCTCGAGGACGGAAGGACCCTTGCTGATTACAAT 810408
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| || ||||||||||| | ||||| ||
Sbjct 810409 ATCCAGAAAGAATCCACTCTCCATTTGGT 810437
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | |||||||||||| |||| || || || |||| | ||
Sbjct 804869 ATGCAGATCTTCGTAAAGACTCTTACCGGTAAAACGATCACCCTCGAGGTTGAAAGCTCC 804928
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | || ||| ||||||||||| || || || || || || |||
Sbjct 804929 GACACCATTGACAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCTCCAGACCAA 804988
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || || ||| | || ||| | ||| | | || ||||||
Sbjct 804989 CAGAGACTCATCTTTGCTGGTAAGCAGCTCGAAGATGGAAGGACCCTTGCTGACTACAAC 805048
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| || | || | ||| | || ||| | || |||
Sbjct 805049 ATCCAAAAGGAATCAACTCTCCACCTGGTTCTCCGGTTGAGAGGTGGT 805096
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | |||||||||||| |||| || || || |||| | ||
Sbjct 810001 ATGCAGATCTTCGTAAAGACTCTTACCGGTAAAACGATCACCCTCGAGGTTGAAAGCTCC 810060
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | || ||| ||||||||||| || || || || || || |||
Sbjct 810061 GACACCATTGACAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCTCCAGACCAA 810120
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || || ||| | || ||| | ||| | | || ||||||
Sbjct 810121 CAGAGACTCATCTTTGCTGGTAAGCAGCTCGAAGATGGAAGGACCCTTGCTGACTACAAC 810180
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| || | || | ||| | || ||| | || |||
Sbjct 810181 ATCCAAAAGGAATCAACTCTCCACCTGGTTCTCCGGTTGAGAGGTGGT 810228
Score = 105 bits (116), Expect = 6e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | || || ||||| | ||||||||||| || | | |
Sbjct 810685 ATGCAGATCTTTGTCAAGACCCTCACGGGGAAAACCATAACTCTTGAAGTTGAGAGCTCA 810744
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| || | || || ||||| || ||||| || || || || || ||
Sbjct 810745 GATACCATTGACAATGTTAAGGCGAAGATTCAGGATAAGGAAGGGATCCCTCCGGACCAG 810804
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| ||||||||| | |||||| || ||| | | || ||||||
Sbjct 810805 CAGAGGCTCATCTTTGCTGGCAAACAGCTGGAGGATGGACGAACCCTTGCAGACTACAAC 810864
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || ||||| ||||||
Sbjct 810865 ATCCAGAAAGAGTCCACC 810882
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || ||| | || || || || ||||||| || || || | | |
Sbjct 810913 ATGCAAATATTCGTCAAGACTCTCACAGGAAAGACCATCACTCTAGAGGTTGAGAGCTCG 810972
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| || | || ||| || || |||||||| || || || || || ||
Sbjct 810973 GATACCATTGACAATGTGAAGGCAAAGATACAGGACAAGGAAGGAATCCCTCCGGACCAG 811032
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || || ||| | |||||| || ||| | | |||||||||
Sbjct 811033 CAGAGACTCATCTTTGCTGGGAAGCAGCTCGAGGATGGTCGGACCCTGGCTGATTACAAC 811092
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || || |||||||||
Sbjct 811093 ATCCAGAAGGAATCCACC 811110
>seq7521
Length=6323785
Score = 118 bits (130), Expect = 9e-22
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | || || || ||| |||| || || ||||||| | ||
Sbjct 4430934 ATGCAGATCTTCGTGAAGACTCTTACTGGCAAGACGATCACCCTCGAGGTGGAAAGCTCC 4430875
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | || || ||||| ||||| || || || |||||||| |||
Sbjct 4430874 GACACCATTGACAATGTGAAGGCCAAGATTCAGGACAAAGAAGGAATCCCACCCGACCAA 4430815
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | || || |||||||| || ||| | || ||| | | ||| | | |||||||||
Sbjct 4430814 CAAAGACTCATCTTTGCCGGGAAGCAGCTGGAAGATGGCAGGACCCTTGCTGATTACAAC 4430755
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || || |||||||||
Sbjct 4430754 ATCCAGAAGGAATCCACC 4430737
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | || || || || ||||||| || || || | | |
Sbjct 4430478 ATGCAGATCTTTGTGAAGACACTCACGGGCAAGACCATCACTCTGGAGGTAGAGAGCTCG 4430419
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | ||| ||| ||||||||||||||||||||||| || || ||
Sbjct 4430418 GACACAATCGACAATGTGAAAGCAAAGATTCAAGACAAGGAGGGTATTCCCCCGGACCAG 4430359
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || || ||| | ||||| | ||| | | ||||||||
Sbjct 4430358 CAGAGACTCATCTTTGCAGGGAAGCAGCTGGAGGACGGAAGAACCCTAGCGGATTACAAT 4430299
Query 22399 ATTCAAAAAGAATCCACCATACAT 22422
|| || || ||||| ||| | |||
Sbjct 4430298 ATCCAGAAGGAATCAACCCTTCAT 4430275
>seq5186
Length=9353477
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | |||||||| || | || || || ||||| | | ||
Sbjct 7866254 ATGCAGATCTTCGTCAAGACCCTCACCGGTAAGACTATTACCCTCGAGGTGGAGAGCTCC 7866195
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | | || || || |||||||||||||||||||| || || ||
Sbjct 7866194 GACACCATCGACAACGTAAAGGCCAAGATCCAAGACAAGGAGGGTATTCCCCCGGACCAG 7866135
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | || || || ||||| || ||| | |||||| |||||| | |||| ||||||
Sbjct 7866134 CAAAGGCTGATTTTCGCCGGGAAGCAGCTGGAGGATGGACGCACCCTGGCCGACTACAAC 7866075
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || ||||| || ||| | || || ||| | || |||| || ||
Sbjct 7866074 ATCCAGAAAGAGTCTACCCTCCACTTGGTTCTCCGTCTGCGTGGTGG 7866028
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || ||||| || || | |||||||| || |||| | || ||||| | | |
Sbjct 7866027 GATGCAGATCTTTGTGAAGACCCTGACCGGTAAGACCATCACGTTGGAGGTGGAGAGCTC 7865968
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||| ||| | ||| | | ||| || || || ||||||||||||||||| || || ||
Sbjct 7865967 CGACACCATCGACAACGTGAAAGCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCA 7865908
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | || || |||||||| || ||| | |||||| || || | | ||||||||
Sbjct 7865907 GCAGAGGCTGATCTTTGCCGGTAAGCAGCTGGAGGATGGTCGTACTCTTGCGGATTACAA 7865848
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
||| || || || || ||| | || || || |||||
Sbjct 7865847 CATCCAGAAGGAGTCGACCCTCCACTTGGTGTTGCG 7865812
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || || ||||| || | || || || || |||||||||| || || | |
Sbjct 7866940 AGATGCAGATCTTCGTTAAGACCCTCACAGGCAAGACAATCACTCTTGAGGTCGAGAGCT 7866881
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|||| || | ||| | |||| |||||| || ||||||||||| ||||| || || |
Sbjct 7866880 CCGACACAATCGACAACGTCAAGGCAAAAATCCAGGACAAGGAGGGGATTCCCCCAGACC 7866821
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || | | || ||||| || || || | ||||| | | ||| || | || ||||
Sbjct 7866820 AGCAGAGGTTGATCTTTGCTGGTAAGCAACTGGAGGACGGCAGAACCCTCGCTGACTACA 7866761
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||| ||||| || ||| | ||||| ||| | || | || || |||
Sbjct 7866760 ACATTCAGAAAGAGTCAACCCTCCATTTGGTTCTTCGTCTCCGTGGTGGT 7866711
Score = 100 bits (110), Expect = 2e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|||||||||| || || || ||| | || || || || |||| || || || || | |
Sbjct 4546679 AGATGCAAATCTTCGTGAAGACTCTTACTGGAAAGACCATCACGCTCGAGGTTGAGAGCT 4546738
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || | || || ||||| || || || |||||||| || ||||| || ||||
Sbjct 4546739 CGGACACAATCGAGAATGTCAAATCCAAGATCCAGGACAAGGAAGGAATTCCTCCGGATC 4546798
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || | | ||||| || || || || ||||||||| || || || | || ||||
Sbjct 4546799 AGCAGAGGTTGATATTCGCGGGGAAGCAATTAGAGGATGGACGAACACTCGCTGACTACA 4546858
Query 22397 ACATTCAAAAAGAATCCACC 22416
|||| || ||||||||||||
Sbjct 4546859 ACATCCAGAAAGAATCCACC 4546878
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || | || ||||| ||| |||| | || || || | | ||
Sbjct 7866710 ATGCAAATCTTCGTCAAGACCCTCACGGGTAAGACGATCACGTTGGAGGTTGAGAGCTCC 7866651
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | | || || || || ||||| ||||||||||| || || ||
Sbjct 7866650 GACACCATTGACAACGTAAAGGCCAAGATCCAGGACAAAGAGGGTATTCCTCCGGACCAG 7866591
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || || |||||||| ||| | |||||| || ||| | | || ||||||
Sbjct 7866590 CAGAGGCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGTCGGACCCTTGCTGACTACAAC 7866531
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || ||||| | ||||| ||| | || | || || |||
Sbjct 7866530 ATCCAGAAGGAGTCCACTCTCCATTTGGTTCTTCGTCTCCGTGGTGGT 7866483
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || | ||||| ||||| | || || || || |||| | |
Sbjct 4547137 ATGCAGATTTTCGTGAAGACCCTCACCGGAAAAACCATAACACTGGAGGTTGAAAGCTCG 4547196
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | | || || ||||| ||||||||||| || | ||||| |||
Sbjct 4547197 GACACGATCGAGAACGTGAAGTCGAAGATTCAGGACAAGGAGGGAATCTCGCCCGACCAA 4547256
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || ||||| ||||| || ||| | || ||| || || | |||||||||||
Sbjct 4547257 CAGAGGCTGATATTCGCCGGAAAGCAGCTCGAAGATGGACGAACTCTGTCCGATTACAAT 4547316
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTT 22448
|| || ||||| || || | || | ||| | || | || || |||||
Sbjct 4547317 ATACAGAAAGAGTCGACTCTTCACCTCGTTCTCCGCCTCCGTGGTGGTTT 4547366
Score = 84.2 bits (92), Expect = 2e-11
Identities = 138/199 (69%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || | |||||||| || |||| || |||||||| | | |
Sbjct 7865799 GATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACTATCACACTGGAAGTGGAGAGCTC 7865740
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| || | ||| | | || || || || ||||||||||| || || || || ||
Sbjct 7865739 GGACACGATCGACAACGTGAAGGCGAAGATACAGGACAAGGAGGGAATCCCCCCGGACCA 7865680
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| ||||| ||||| || || || ||| | ||||| ||| || | | || |||||
Sbjct 7865679 GCAGCGTCTGATATTCGCTGGAAAGCAGCTGGAGGACGGCCGTACACTTGCGGACTACAA 7865620
Query 22398 CATTCAAAAAGAATCCACC 22416
||| || || || || |||
Sbjct 7865619 CATCCAGAAGGAGTCGACC 7865601
>seq1
Length=11827220
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | ||||| || || |||| || || || || | | |
Sbjct 5218874 ATGCAGATATTTGTGAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCT 5218815
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || || || ||||||||||| || ||||| || ||
Sbjct 5218814 GACACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAGGGGATCCCACCGGACCAG 5218755
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || |||||||| || ||| | |||||| ||||||| | | || ||||||
Sbjct 5218754 CAGAGGCTGATCTTTGCCGGTAAGCAGCTGGAGGATGGCCGCACCCTGGCGGACTACAAC 5218695
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || || ||| | || || || | || |||| || ||
Sbjct 5218694 ATCCAGAAGGAGTCTACCCTTCACTTGGTCCTCCGTCTGCGAGGTGG 5218648
Score = 105 bits (116), Expect = 6e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|||||||||| || || || || | || || || || ||||||| || || || | |
Sbjct 5219560 AGATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACAATCACTCTCGAGGTCGAGAGCT 5219501
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|||| || | ||| || | || ||||| || ||||||||||| || || || || |
Sbjct 5219500 CCGACACAATTGACAATGTTAAGGCGAAAATCCAGGACAAGGAGGGGATCCCCCCGGACC 5219441
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || | || || || || || || ||||| |||||| ||| || || |||| ||||
Sbjct 5219440 AGCAGAGGCTGATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGAACGCTCGCCGACTACA 5219381
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGT 22427
|||| || ||||| |||||| | || || ||
Sbjct 5219380 ACATCCAGAAAGAGTCCACCCTCCACTTGGT 5219350
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || | || || || ||| ||||| | || || || | | ||
Sbjct 5219330 ATGCAAATCTTCGTCAAGACCCTCACGGGCAAGACGATCACTTTGGAGGTTGAGAGCTCC 5219271
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | | ||| || ||||| ||||||||||| || ||||| || ||
Sbjct 5219270 GACACCATCGACAACGTGAAAGCTAAGATTCAGGACAAGGAGGGCATCCCACCTGACCAG 5219211
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || || || || || ||| | ||||| ||| ||| | | || ||||||
Sbjct 5219210 CAGAGGCTGATCTTCGCTGGAAAGCAGCTTGAGGACGGCCGAACCTTGGCTGACTACAAC 5219151
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| || || || |||||| | || || ||
Sbjct 5219150 ATCCAGAAGGAGTCCACCCTCCACTTGGT 5219122
>seq7859
Length=784361
Score = 86.0 bits (94), Expect = 5e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 22309 CAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTA 22368
|| ||||||||||| || ||||| ||||||||| | || |||||||| || || ||| ||
Sbjct 400180 CAGGACAAGGAGGGCATACCACCTGATCAACAAAGGCTGATATTTGCTGGGAAGCAGCTA 400239
Query 22369 GAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
|| ||| || ||| | | || |||||||| || ||||| |||||
Sbjct 400240 GAAGATGGACGAACCCTAGCAGACTACAACATCCAGAAAGAGTCCAC 400286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419665341036685
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |