Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tarenaya_20hassleriana_20[refseq_20GCF_5F000463585.1_202013-09-05]
12,249 sequences; 249,929,577 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq5186 147 2e-29
seq6747 140 2e-27
seq7521 127 2e-23
seq11203 125 5e-23
seq3309 125 5e-23
seq6695 123 2e-22
seq2 122 7e-22
seq1 93.3 3e-13
seq5835 87.8 1e-11
>seq5186
Length=9353477
Score = 147 bits (162), Expect = 2e-29
Identities = 566/880 (64%), Gaps = 27/880 (3%)
Strand=Plus/Plus
Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910
|||||| ||| ||| ||| ||||| | || || | || || || | ||||| || |
Sbjct 5347127 AATCAACTCCCTCGTGCAAGGAATCGATCTCGATGCTCGTCTGCGTGGTGGAAGAGAGCG 5347186
Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCA 517970
| | || || | || ||||| ||||| || || | ||| || | || | | | |
Sbjct 5347187 CCCTCTTCGCTCTCTCGCATGCAGTCCTCAGCCTCCTTAAAGCCCTAGCGTTTCCACTGA 5347246
Query 517971 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATC 518028
||| | || | ||| |||||||| ||| |||| | ||| | ||||| | || ||
Sbjct 5347247 TATCCTTCTTGTGTTTCCTCTTGAACTCTGCAACGAA--ATGGTTCACAAGCCTGTTGTC 5347304
Query 518029 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 518088
||||||||||||||||| | || | ||| | ||||||| | || | ||| | || ||
Sbjct 5347305 GAAATCTTCACCTCCCAAGTGGGTGTCTCCCGCCGTAGCTTTCACCTCGAACACGCCTTC 5347364
Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148
||| | | ||| || | ||||| |||||||| |||| ||| ||||| || |||||
Sbjct 5347365 TTCGATCGTCAACAGCGAAACATCGAATGTTCCACCGCCCAGATCGAAAATCAGAACATT 5347424
Query 518149 CATTTC-------TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201
| | || |||||| || || || | |||||||||| || || || || |
Sbjct 5347425 CCTCTCGCCGGATTTTGTC-CCTTTCTTGTCCAACCCATACGCAATCGCCGCCGCTGTCG 5347483
Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261
| || || || || |||| ||| || || || || ||| ||| || || || || || |
Sbjct 5347484 GCTCGTTGATTATCCTCAGAACGTTGAGCCCTGCGATTGCTCCGGCGTCCTTCGTCGCCT 5347543
Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTAC 518321
|||| || || ||||| || || || || || || | || || | | || | ||||
Sbjct 5347544 GTCTCTGCGAGTCGTTGAAGTAAGCTGGCACCGTTACGACAGCGTTTTTAACGGCGTTAC 5347603
Query 518322 CAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 518381
| | | || ||| || |||| || | || | |||||| || || | ||||
Sbjct 5347604 CGAGGAAGGCTTCTGCAACTTCCCTCATCTTCGTCAACACCATTGAAGATATCTCCTCTG 5347663
Query 518382 GGGAATATTGCTTGGATTCATTTTGATATGATACTT---CAAAAT-AT-GGTTTATTACC 518436
| | | | ||| ||| || | | ||||| || || || ||||| | ||
Sbjct 5347664 GAGCAAACTGC-----TTCTCTTCGCCCTTGTACTTGACCACGATCATGGGTTTGTCGCC 5347718
Query 518437 ---AACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATT 518493
| | || ||| ||||| ||||||| |||||| || || || | ||||
Sbjct 5347719 GGGACCGGAAACAACCTTAAACGGCCAGTGTTTCATGTCGCTCTGGACGGATGGGTC-GG 5347777
Query 518494 AAAATCT-CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAG 518552
| ||||| | ||||| | || || || || || | ||| || || || || ||
Sbjct 5347778 AGAATCTCCGGCCAATGAGACGCTTGGCGTCGAAGACAGTGTTCTGAGGGTTCATCGCCA 5347837
Query 518553 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATG 518612
| || | || || |||||||| || || ||| || || || || | || || || |
Sbjct 5347838 CCTGGTTCTTCGCAGCATCTCCGATTAGCCTTTCCGTGTCGGTGAAGGCCACGTACGACG 5347897
Query 518613 GAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACAC 518672
| || || || || ||||| || || | || || ||||| | | || ||| || |
Sbjct 5347898 GCGTCGTACGGTTGCCTTGGTCGTTGGGGATGATCTCAACACGATCGTTCATCCACACTC 5347957
Query 518673 CTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712
| |||||||| | || || || | ||| || || || ||
Sbjct 5347958 CGACACAACTGTATGTCGTGCCCAGATCGATGCCGATCGC 5347997
Score = 109 bits (120), Expect = 4e-18
Identities = 244/364 (67%), Gaps = 12/364 (3%)
Strand=Plus/Plus
Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910
|||||| ||| ||| ||| ||||| | || || | || || || | ||||| || |
Sbjct 5352393 AATCAACTCCCTCGTGCAAGGAATCGATCTCGATGCTCGTCTGCGTGGTGGAAGAGAGCG 5352452
Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCA 517970
| | || || | || ||||| ||||| || || | ||| || | || | | | |
Sbjct 5352453 CCCTCTTCGCTCTCTCGCATGCAGTCCTCAGCCTCCTTAAAGCCCTAGCGTTTCCACTGA 5352512
Query 517971 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATC 518028
||| | || | ||| |||||||| ||| |||| | ||| | ||||| | || ||
Sbjct 5352513 TATCCTTCTTGTGTTTCCTCTTGAACTCTGCAACGAA--ATGGTTCACAAGCCTGTTGTC 5352570
Query 518029 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 518088
||||||||||||||||| | || | ||| | ||||||| | || | ||| | || ||
Sbjct 5352571 GAAATCTTCACCTCCCAAGTGGGTGTCTCCCGCCGTAGCTTTCACCTCGAACACGCCTTC 5352630
Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148
||| | | ||| || | ||||| |||||||| |||| ||| ||||| || |||||
Sbjct 5352631 TTCGATCGTCAACAGCGAAACATCGAATGTTCCACCGCCCAGATCGAAAATCAGAACATT 5352690
Query 518149 CATTTC-------TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201
| | || |||||| || || || | ||||||||||| || || || || |
Sbjct 5352691 CCTCTCGCCGGATTTTGTC-CCTTTCTTGTCCAAACCATACGCAATCGCCGCCGCTGTCG 5352749
Query 518202 GTTC 518205
| ||
Sbjct 5352750 GCTC 5352753
>seq6747
Length=1176643
Score = 140 bits (154), Expect = 2e-27
Identities = 310/462 (67%), Gaps = 10/462 (2%)
Strand=Plus/Minus
Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 517910
||||||| || ||| ||| ||| |||| ||||| || || |||| | || || || |
Sbjct 326494 AATCAATACCCTCGTACAGAGAGTCAATCTCAATGGTGGTCTGAGCTGTGGACGACAGGG 326435
Query 517911 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATT 517968
| ||||| | ||||| ||||| || | || || | |||| | | | || | |
Sbjct 326434 TCCTCTTAGCTCTCTCACAGGCTGTTCTCAACCTCCGGAGGGCTCTCG--GGTTACCACT 326377
Query 517969 CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATC 518028
| || | || | || |||||||| || | |||| | | || | | || ||
Sbjct 326376 GATGTCCTTCTTGTTCTTCCTCTTGAACTCCTGAACAAAGTGGTTGACCATTCTGTTGTC 326317
Query 518029 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 518088
||| |||||||| || | | ||| | ||| | || ||| | || | ||| | || ||
Sbjct 326316 AAAGTCTTCACCACCGAGATGAGTGTCTCCAGCAGTGGCTTTAACCTCGAAGATACCCTC 326257
Query 518089 TTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148
||||| || | ||||| |||||| ||| |||||||| | ||||||||| | |||||
Sbjct 326256 TTCAATAGTGAGAAGAGAGACATCAAAGGTACCACCACCGAGATCAAAAATCAAGACATT 326197
Query 518149 CATTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 518202
| | || | |||| | || ||||||||||| |||| |||||||| || ||
Sbjct 326196 CTTCTCACCAACACTGGTAGCCTTCTTGTCAAGACCATAGGCAATGGCAGCAGCCGTAGG 326137
Query 518203 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 518262
||||| || || | || ||||| | |||||||| || ||||| || ||||||||
Sbjct 326136 CTCATTGATGATACGCATGACATTCAACCCAGCAATGACACCGGCATCCTTTGTGGCTTG 326077
Query 518263 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304
| || || || || || || || |||||||| | |||||
Sbjct 326076 GCGCTGGGAGTCATTGAAGTAAGCTGGAACAGTGACCACGGC 326035
>seq7521
Length=6323785
Score = 127 bits (140), Expect = 2e-23
Identities = 311/465 (67%), Gaps = 16/465 (3%)
Strand=Plus/Minus
Query 517851 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG---AGTCGAAGAAGATA 517907
|||| || || || |||| ||||||| |||||||| || || |||||| ||| | |
Sbjct 4884194 AATCGATACCCTCATACAAGGAATCAATCTCAATCGTGGTCTGGGCAGTCGATGAA-AGA 4884136
Query 517908 GTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT 517967
|| | | || || | ||||| ||||| || | ||| | | ||| | | | |||
Sbjct 4884135 GTCCTCTTT--GCCCTCTCACAGGCTGTTCTCAATCTCCTGAGAGCTCTAG--GGTTGCC 4884080
Query 517968 TCAAATCTGTTTTATATT--TTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATT 518025
| || | || | || |||||||||| || | ||| | | || | | ||
Sbjct 4884079 GCTGATGTCCTTCTTGTTCTTTCTCTTGAATTCCTGGACAAAGTGGTTGACCATTCTGTT 4884020
Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085
||| ||||||||||| || | | || | || | || ||| | || | ||||| ||
Sbjct 4884019 ATCGAAATCTTCACCGCCGAGATGGGTGTCCCCGGCAGTGGCTTTCACCTCGAAAATACC 4883960
Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145
|| |||| | | ||||| |||||| ||| |||||||| | ||| || || | ||
Sbjct 4883959 CTCCTCAATGGTGAGAAGAGAGACATCAAAGGTACCACCACCAAGATCGAAGATCAAGAC 4883900
Query 518146 ATTCATTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCAGT 518199
||| | || | | |||| | || || |||||||| |||| ||||||||||||
Sbjct 4883899 GTTCTTCTCGCCGACACTGGTAGCTTTCTTGTCGAGACCATAGGCAATAGCAGCAGCAGT 4883840
Query 518200 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 518259
|| || || || || | || ||||| ||||||||||| || || || || |||||
Sbjct 4883839 AGGCTCGTTGATGATACGCATCACATTCAGACCAGCAATGACACCAGCGTCCTTTGTGGC 4883780
Query 518260 TTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304
||| | ||| |||||||| || || || || ||||| | ||| ||
Sbjct 4883779 TTGACGTTGGGAATCGTTGAAGTAAGCTGGGACAGTGACAACAGC 4883735
Score = 127 bits (140), Expect = 2e-23
Identities = 597/928 (64%), Gaps = 34/928 (4%)
Strand=Plus/Minus
Query 517388 CGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAAT 517447
||||| || ||| | | ||||||| || | | || || ||||||||||| | |||
Sbjct 6206279 CGTTCCCCTTCGTAGACTTGGATAAGTACACCGGGCTGGTTGTCTGAATAAGTCGAAAAG 6206220
Query 517448 ACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACC 517506
|| ||| ||| || ||||| || |||||||| |||| ||||| | |||
Sbjct 6206219 AC-CTGTTCTTTCTTGGTCGGAATGGTCGTGTTTCTCGGGATAAGCACAGTCATGACACC 6206161
Query 517507 ACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATA--TTTTGA 517564
|||||||| || | ||| ||||| | || |||||||| | || |||| | | |||
Sbjct 6206160 GCCTGCTGTCTCAAGACCCAGAGACAAGGGGGTGACATCCAATA--ACAAGAGGTCTTGG 6206103
Query 517565 AGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 517623
| || || | || ||| ||||| | || ||||||| || |||||||| || ||
Sbjct 6206102 ACCTTCTCGTTGCCTTCACCGCTCAAGA-TGGCAGCTTGAACGGCCGCACCATAGGCCAC 6206044
Query 517624 AGCTTCATCAGGATTAA--CAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TGAAAG 517680
||| || || ||||||| | || || || | || |||||||| || | || ||
Sbjct 6206043 AGCCTCGTCTGGATTAATGCTCTTGCAA--AGCTCCTTGCCATTGAAGAAGTCCTGCAA- 6205987
Query 517681 AAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTG 517740
||| ||| ||||| || || | || || || ||||| | || | ||||| ||
Sbjct 6205986 AAGCTGTTGAACCTTGGGGATTCTAGTGGAGCCACCAACGAGGACGACGTCATGAACGC- 6205928
Query 517741 TGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAA 517799
|| | || |||| || | || ||| || |||||||| || | || || |
Sbjct 6205927 TGCTCTTGTCCATCTTAGCGTCTCGCAAACACTTCTCAACGGGCTCCATACATTTCCTGA 6205868
Query 517800 ACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTC 517859
| | || ||||| |||||| | || | || | || | |||| || |
Sbjct 6205867 AGAGATCCATGTTGAGTTCCTCGAATCTCGCACGGGTGATGGTTGTGTAGAAATCGATAC 6205808
Query 517860 CTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAG 517919
| ||| |||| ||||||| || || || ||||||| | || || || | | || |
Sbjct 6205807 CCTCGTACAAGGAATCAATCTCGATGGTGGTTTGAGCAGTGGAGGAGAGAGTTCTCTTGG 6205748
Query 517920 CACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA--TCTGT 517977
| | |||||||||||||| | || | | ||| || |||| | || ||| |
Sbjct 6205747 CTCTCTCACATGCTGTCCTCAACCTCCTCAGAGCTCGTG--GATTCCCGCTAATGTCTTT 6205690
Query 517978 TTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCAAAATCT 518035
|| | || |||||||| |||| ||| | ||| | || | | || || |||||
Sbjct 6205689 CTTGTGCTTCCTCTTGAACTCTTGAACGAA--ATGGTTCACCATCCTGTTGTCGAAATCC 6205632
Query 518036 TCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAA-- 518093
|| || || | | ||| | || | ||| || | |||| ||| | || ||||| |
Sbjct 6205631 TCGCCACCAAGGTGAGTGTCACCAGCCGTTGCCTTCACTTCGAAGATACCCTCTTCGATC 6205572
Query 518094 GAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTT 518153
| || ||||| || || || |||||||||| |||||| || | || ||| | |
Sbjct 6205571 GTGAGCAAAGA--CACGTCGAAAGTACCACCACCCAGATCAAAGATCAACACGTTCTTCT 6205514
Query 518154 CTTTGTC------TTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 518207
| | | | || || |||||||| ||||| | || || || || || || |
Sbjct 6205513 CACCGACACTCGATGCCTTCTTGTCAAGACCGTACGCGATTGCTGCTGCGGTCGGCTCGT 6205454
Query 518208 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 518267
| || || | || |||||| || ||||| || || || ||||| || ||||| | |
Sbjct 6205453 TGATGATACGCATAACATTGAGGCCAGCGATCACACCAGCGTCTTTGGTAGCTTGACGCT 6205394
Query 518268 GTGAATCGTTAAAATATGCAGGAACAGT 518295
| || ||||| ||||| ||||| |||||
Sbjct 6205393 GAGAGTCGTTGAAATAAGCAGGTACAGT 6205366
>seq11203
Length=4714577
Score = 125 bits (138), Expect = 5e-23
Identities = 134/177 (76%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 518176 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 518235
|||||| | | ||||||||| || |||||||| || || ||| |||| |||||||||
Sbjct 3318683 ACCATATGATAGAGCAGCAGCTGTCGGTTCATTGATGATCCTCTGCACATCAAGACCAGC 3318624
Query 518236 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295
||||| || ||||| || |||||||||||||| | |||||| ||||| || ||||||||
Sbjct 3318623 GATTCTCCCAGCATCCTTTGTGGCTTGTCTTTGAGCATCGTTGAAATAAGCTGGAACAGT 3318564
Query 518296 AATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTT 518352
|||||| || | || | ||| |||| || || || |||| ||||||||
Sbjct 3318563 AATAACAGCTTTGGTGATAGTTTTCCCAAGGTATGCTTCAGCAGTTTCCTTCATTTT 3318507
>seq3309
Length=3363706
Score = 125 bits (138), Expect = 5e-23
Identities = 134/177 (76%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 518176 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 518235
|||||| | | |||||||| |||||||| || || || ||| |||| |||||||||
Sbjct 2506354 ACCATATGACAGGGCAGCAGCTGTTGGTTCGTTGATGATCCTCTGGACATCAAGACCAGC 2506413
Query 518236 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295
||||| || ||||| |||||||||||||| |||| ||| || ||||| |||||||||||
Sbjct 2506414 GATTCTCCCAGCATCCTTAGTGGCTTGTCTCTGTGCATCATTGAAATAAGCAGGAACAGT 2506473
Query 518296 AATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTT 518352
|||||| || | || | ||| |||| || || || |||| ||||||||
Sbjct 2506474 AATAACAGCTTTGGTGATAGTTTTCCCAAGGTATGCTTCGGCAGTTTCCTTCATTTT 2506530
Score = 93.3 bits (102), Expect = 3e-13
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 322243 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 322302
||| |||| || || || || |||||||| || || || | | ||||| | ||| ||
Sbjct 2506354 ACCATATGACAGGGCAGCAGCTGTTGGTTCGTTGATGATCCTCTGGACATCAAGACCAGC 2506413
Query 322303 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 322362
||| | ||| ||| ||| |||||||||||||| ||||| ||||| || || |||||
Sbjct 2506414 GATTCTCCCAGCATCCTTAGTGGCTTGTCTCTGTGCATCATTGAAATAAGCAGGAACAGT 2506473
Query 322363 AATAACTGCTTTATTAATAGGTTT 322386
|||||| ||||| | |||| |||
Sbjct 2506474 AATAACAGCTTTGGTGATAGTTTT 2506497
>seq6695
Length=6602074
Score = 123 bits (136), Expect = 2e-22
Identities = 195/278 (70%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083
|| |||||||||||||| || | | || | || | |||||| | || | ||| |
Sbjct 876997 TTGTCAAAATCTTCACCACCAAGATGGGTGTCACCGGCGGTAGCTTTCACCTCGAAGATA 876938
Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143
|| ||||||| | | ||||| |||||| ||| |||||||| | |||||| || |
Sbjct 876937 CCCTCTTCAATGGTGAGAAGAGAGACATCAAAGGTACCACCACCGAGATCAAAGATCAAG 876878
Query 518144 ACATTCATTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCA 518197
|| ||| | || | | |||| | || |||||||| || |||| |||||| ||
Sbjct 876877 ACGTTCTTCTCACCGACACTGGTAGCTTTCTTGTCAAGACCGTAAGCAATAGCAGCCGCC 876818
Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257
|| ||||| ||||| || | || ||| || | ||||||||| || || || || |||
Sbjct 876817 GTAGGTTCGTTAATGATACGCATAACGTTCAAACCAGCAATGACACCAGCGTCCTTTGTG 876758
Query 518258 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295
||||| | || || ||||| || || |||||||||||
Sbjct 876757 GCTTGACGCTGGGAGTCGTTGAAGTAAGCAGGAACAGT 876720
>seq2
Length=4120898
Score = 122 bits (134), Expect = 7e-22
Identities = 133/177 (75%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 518176 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 518235
|||||| | || ||||| || || ||||| || ||||||||| |||| |||||||||
Sbjct 1312172 ACCATAAGAAAGCGCAGCTGCTGTGGGTTCGTTTATAATTCTCTCCACATCAAGACCAGC 1312231
Query 518236 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295
|||||| ||||||||||| || || |||||||| | ||| || |||||||| || |||||
Sbjct 1312232 AATTCTACCTGCATCTTTTGTTGCCTGTCTTTGAGCATCATTGAAATATGCTGGCACAGT 1312291
Query 518296 AATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTT 518352
||||| || | | || ||| || | ||||| ||| || | |||||| ||
Sbjct 1312292 GATAACAGCCTTGGAAACAGATTTCCCGAGGTAAGCCTCTGCAGTCTCTTTCATCTT 1312348
>seq1
Length=11827220
Score = 93.3 bits (102), Expect = 3e-13
Identities = 147/208 (71%), Gaps = 6/208 (3%)
Strand=Plus/Minus
Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167
|||||| || |||||||| | |||||| | || | | |||| ||| ||| |||
Sbjct 2619633 ACATCAAAAGTACCACCACCAAGATCAAAGACTAGAA---TTGTTTCATTG-CTT--TTT 2619580
Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227
| |||| ||||| || || | |||||| || || ||||| ||||| | | ||| |
Sbjct 2619579 CTCTCAAACCCATAAGCCAAGGAAGCAGCTGTAGGCTCATTGATAATCCGAAGAACTTCC 2619520
Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287
| |||||||| | || |||||||| || ||| || ||||||||||| || || |||
Sbjct 2619519 AACCCAGCAATGCGACCAGCATCTTTTGTAGCTGTCCTCTGTGAATCGTTGAAGTAAGCA 2619460
Query 518288 GGAACAGTAATAACGGCATCAGTTACTT 518315
|| ||||| || || || | || ||||
Sbjct 2619459 GGCACAGTGATTACAGCTTTGGTAACTT 2619432
>seq5835
Length=2231668
Score = 87.8 bits (96), Expect = 1e-11
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 870801 TTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAA 870860
|||| |||| ||| || || |||||||| |||||||||||| ||||||| |||||||| |
Sbjct 447550 TTGTTGATTTTTCCTCGCCCAATATTGCAAAAGAAATGCATGTTGGACACTTAAGATCTA 447609
Query 870861 CTATTATTGGTGA 870873
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Sbjct 447610 CAATTATTGGTGA 447622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780214564271794
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |