Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tarenaya_20hassleriana_20[refseq_20GCF_5F000463585.1_202013-09-05]
12,249 sequences; 249,929,577 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq6695 127 1e-24
seq1 118 7e-22
seq5186 111 1e-19
seq7521 104 2e-17
seq10304 98.7 6e-16
seq7859 93.3 3e-14
>seq6695
Length=6602074
Score = 127 bits (140), Expect = 1e-24
Identities = 151/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||||| ||| |||||||| ||||| ||||| | |||| ||||| |||| ||||||||
Sbjct 810888 GTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCTGCAAGGGTTCGTCCATCCTCCAGCTG 810829
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
||| || ||||| || || | |||||||| | || | ||| ||||| || ||||||
Sbjct 810828 TTTGCCAGCAAAGATGAGCCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCCTGAATCTT 810769
Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957
| || || | || | || | |||||| || | ||||||||||| |||||
Sbjct 810768 CGCCTTAACATTGTCAATGGTATCTGAGCTCTCAACTTCAAGAGTTATGGTTTTCCCCGT 810709
Query 34958 GAGAGTCTTCACAAAGATCTGCATA 34982
||| ||||| |||||||||||||||
Sbjct 810708 GAGGGTCTTGACAAAGATCTGCATA 810684
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
||||| || | ||| ||||||||| || || || || | |||| | | | | || ||
Sbjct 810437 ACCAAATGGAGAGTGGATTCTTTCTGGATATTGTAATCAGCAAGGGTCCTTCCGTCCTCG 810378
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| || ||||| || || | ||||||||| | || | || ||||||||
Sbjct 810377 AGCTGTTTGCCAGCAAAGATAAGCCTTTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGG 810318
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| || ||| | || | ||| | |||||| |||| ||| || |||||
Sbjct 810317 ATCTTTGCCTTCACGTTGTCAATGGTATCAGAGCTCTCAACCTCGAGGGTGATCGTTTTG 810258
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || ||||||||||| ||||||||||||
Sbjct 810257 CCGGTAAGAGTCTTCACGAAGATCTGCATA 810228
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| || || || || | ||| | ||| |||| |||||||| || ||||||||
Sbjct 811332 TTCCTTCTGGATATTGTAATCAGCTAGGGTGCGTCCATCCTCCAGCTGCTTCCCGGCAAA 811273
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || | |||||||| | || | ||| |||||||| |||||| || |||
Sbjct 811272 GATGAGCCTCTGCTGGTCGGGTGGGATCCCTTCCTTGTCCTGGATCTTCGCCTTTACGTT 811213
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | || | ||| || |||| ||||||||||| |||||||| ||||||||
Sbjct 811212 GTCAATGGTATCCGAGCTCTCCACCTCGAGAGTTATGGTTTTCCCCGTGAGGGTCTTCAC 811153
Query 34970 AAAGATCTGCAT 34981
|| ||||||||
Sbjct 811152 GAAAATCTGCAT 811141
Score = 102 bits (112), Expect = 5e-17
Identities = 153/215 (71%), Gaps = 8/215 (4%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||| ||| | ||| ||| ||||| || || ||||| | |||| ||||| |||| ||
Sbjct 810666 AACCAGGTGGAGGGTGGATTCCTTCTGGATATTGTAGTCAGCAAGGGTTCGTCCATCCTC 810607
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
||||||||| || ||||| || |||| || ||||| | || | || ||||| ||
Sbjct 810606 CAGCTGTTTGCCAGCAAAGATGAGTCTCTGTTGGTCCGGAGGGATTCCTTCCTTATCCTG 810547
Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947
||||| ||||| || |||| || ||| | ||||| |||| ||| || |
Sbjct 810546 GATCTTTGCCTTGAC--AT--TATCAATTGTGTCAGAGCTTTCAACCTCGAGGGTGATTG 810491
Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|||| || || || ||||| || ||||||||||||
Sbjct 810490 TTTTGCCGGTAAGGGTCTTGACGAAGATCTGCATA 810456
>seq1
Length=11827220
Score = 118 bits (130), Expect = 7e-22
Identities = 156/214 (73%), Gaps = 8/214 (4%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||||| || || ||||| ||||| ||||||| ||| | || |||| |||
Sbjct 5218666 ACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTCC 5218725
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || |||||||| || || | |||||||| | || | ||||||||||||
Sbjct 5218726 AGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCCTGG 5218785
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948
||||| ||||| || | ||||| ||| | ||| || |||| ||| |||||
Sbjct 5218786 ATCTTAGCCTTGAC--AT--TGTCGATGGTGTCAGAGCTCTCGACCTCGAGGGTGATGGT 5218841
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || || |||||||||||||| |||||||||
Sbjct 5218842 CTTGCCGGTCAGAGTCTTCACAAATATCTGCATA 5218875
Score = 86.0 bits (94), Expect = 4e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||| || ||||| ||||| ||||| | | | |||| | || ||
Sbjct 5219122 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTTCGGCCGTCCTCA 5219181
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| ||||| || || || || | |||||||| | || | ||||||||||| |
Sbjct 5219182 AGCTGCTTTCCAGCGAAGATCAGCCTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGA 5219241
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| ||| ||| | || | || | |||||| || | || || || ||
Sbjct 5219242 ATCTTAGCTTTCACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAAAGTGATCGTCTTG 5219301
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|||||||| ||||| || ||||| ||||||
Sbjct 5219302 CCCGTGAGGGTCTTGACGAAGATTTGCATA 5219331
>seq5186
Length=9353477
Score = 111 bits (122), Expect = 1e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|||||||| || || || || || || ||||| |||| || ||||| |||||||| |||
Sbjct 4547327 TCTTTCTGTATATTGTAATCGGACAGAGTTCGTCCATCTTCGAGCTGCTTTCCGGCGAAT 4547268
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | || ||||| ||| | ||||||||||| ||||||| || |||
Sbjct 4547267 ATCAGCCTCTGTTGGTCGGGCGAGATTCCCTCCTTGTCCTGAATCTTCGACTTCACGTTC 4547208
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| |||| || | ||||| || | |||||||||||||| ||||| ||||||||
Sbjct 4547207 TCGATCGTGTCCGAGCTTTCAACCTCCAGTGTTATGGTTTTTCCGGTGAGGGTCTTCACG 4547148
Query 34971 AAGATCTGCAT 34981
|| ||||||||
Sbjct 4547147 AAAATCTGCAT 4547137
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||||||| | || |||||||| ||||| ||||| | ||| | ||| |||| ||
Sbjct 7866045 AACCAAGTGGAGGGTAGACTCTTTCTGGATGTTGTAGTCGGCCAGGGTGCGTCCATCCTC 7866104
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|||||| || ||||| || || || | ||||||||| | || | |||||||||||
Sbjct 7866105 CAGCTGCTTCCCGGCGAAAATCAGCCTTTGCTGGTCCGGGGGAATACCCTCCTTGTCTTG 7866164
Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951
||||| || ||| | || | || | ||| || |||| ||| || || ||
Sbjct 7866165 GATCTTGGCCTTTACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTAATAGTCTT 7866224
Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| ||||| ||||| || |||||||||||
Sbjct 7866225 ACCGGTGAGGGTCTTGACGAAGATCTGCAT 7866254
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
||| |||||||| | || || ||||| ||||| || |||| ||| | || ||||
Sbjct 7865814 CAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGCAAGAGTACGACCATC 7865873
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|||||||| || |||||||| || || | |||||||| | || | |||||||||||
Sbjct 7865874 CTCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATACCCTCCTTGTC 7865933
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948
||||| ||| ||| | || | || | ||| || || | || |||||
Sbjct 7865934 CTGGATCTTGGCTTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCCAACGTGATGGT 7865993
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || || ||||||||||||||||||||
Sbjct 7865994 CTTACCGGTCAGGGTCTTCACAAAGATCTGCAT 7866026
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||||| ||| | || | || |||||||| ||||| || |||
Sbjct 7865608 TCCTTCTGGATGTTGTAGTCCGCAAGTGTACGGCCGTCCTCCAGCTGCTTTCCAGCGAAT 7865667
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| | || | ||||||||||| |||||| || |||
Sbjct 7865668 ATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGTATCTTCGCCTTCACGTTG 7865727
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| |||| || | ||| || || | || || || || || || || ||||||||
Sbjct 7865728 TCGATCGTGTCCGAGCTCTCCACTTCCAGTGTGATAGTCTTACCGGTCAGGGTCTTCACG 7865787
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 7865788 AAGATCTGCAT 7865798
Score = 86.0 bits (94), Expect = 4e-12
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||||||||| ||||| ||||| | || ||||| |||| || | || || || || ||
Sbjct 4546872 TTCTTTCTGGATGTTGTAGTCAGCGAGTGTTCGTCCATCCTCTAATTGCTTCCCCGCGAA 4546813
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
||| | | ||||| || | || | || |||||||| ||||| |||||| |
Sbjct 4546812 TATCAACCTCTGCTGATCCGGAGGAATTCCTTCCTTGTCCTGGATCTTGGATTTGAC--A 4546755
Query 34910 TGCTATCGATTCA--CCG-GC-CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965
| || ||||| ||| || |||||| |||| || ||||| ||||| || |||||||
Sbjct 4546754 TTCT--CGATTGTGTCCGAGCTCTCAACCTCGAGCGTGATGGTCTTTCCAGTAAGAGTCT 4546697
Query 34966 TCACAAAGATCTGCAT 34981
|||| ||||| |||||
Sbjct 4546696 TCACGAAGATTTGCAT 4546681
>seq7521
Length=6323785
Score = 104 bits (114), Expect = 2e-17
Identities = 144/196 (73%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| || || || |||| ||| ||| | | || |||||||| || || |||||
Sbjct 4430287 TTCCTTCTGGATATTGTAATCCGCTAGGGTTCTTCCGTCCTCCAGCTGCTTCCCTGCAAA 4430346
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| |||| |||||||| | || | ||||||||||| |||||| ||| || |
Sbjct 4430347 GATGAGTCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCTTGAATCTTTGCTTTCAC--A 4430404
Query 34910 TGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965
| | ||||| | ||| || ||| || || | || ||||| || |||||||| ||||
Sbjct 4430405 T--TGTCGATTGTGTCCGAGCTCTCTACCTCCAGAGTGATGGTCTTGCCCGTGAGTGTCT 4430462
Query 34966 TCACAAAGATCTGCAT 34981
||||||||||||||||
Sbjct 4430463 TCACAAAGATCTGCAT 4430478
Score = 87.8 bits (96), Expect = 1e-12
Identities = 140/197 (71%), Gaps = 12/197 (6%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAA 34848
|| ||||| ||||| || || | |||| | || |||| |||||||| || || ||||
Sbjct 4430060 TCCTTCTGGATGTTGTAATCAGCCAAAG--TACGACCATCTTCCAGCTGCTTCCCTGCAA 4430117
Query 34849 ATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGG 34908
| || || | |||||||| |||| | |||||||||||| |||||| || ||
Sbjct 4430118 AGATGAGCCTCTGCTGGTCCGGCGGTATCCCCTCCTTGTCTTGGATCTTCGCCTTCAC-- 4430175
Query 34909 ATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964
|| ||||||| || | ||| || || | ||||| || || ||||| | |||
Sbjct 4430176 AT--TATCGATCGTGTCTGAGCTCTCCACCTCCAATGTTATCGTCTTCCCCGTCAATGTC 4430233
Query 34965 TTCACAAAGATCTGCAT 34981
|||||||||||||||||
Sbjct 4430234 TTCACAAAGATCTGCAT 4430250
>seq10304
Length=4769457
Score = 98.7 bits (108), Expect = 6e-16
Identities = 142/198 (72%), Gaps = 8/198 (4%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| | ||| | || | || |||| |||||| ||||| ||
Sbjct 685583 TCCTTCTGGATGTTGTAGTCTGCGAGGGTGCGGCCGTCCTCCAACTGTTTCCCGGCGAAA 685524
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| |||| | ||| |||||||| ||||| ||||| ||
Sbjct 685523 ATCAGCCGCTGCTGGTCCGGCGGGATCCCTTCCTTGTCCTGGATCTTAGCCTTGAC--AT 685466
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| ||||| || || ||| || || | ||||||||| || ||||| || || ||
Sbjct 685465 --TGTCGATGGTGTCGGAGGACTCGACTTCAAGGGTTATGGTCTTCCCCGTTAGTGTTTT 685408
Query 34967 CACAAAGATCTGCATATT 34984
||| ||||||||||| ||
Sbjct 685407 CACGAAGATCTGCATCTT 685390
>seq7859
Length=784361
Score = 93.3 bits (102), Expect = 3e-14
Identities = 107/143 (75%), Gaps = 2/143 (1%)
Strand=Plus/Minus
Query 34748 ATCAT--TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTA 34805
||||| |||| ||||| | |||||| |||| ||| | ||| |||||||| |||||
Sbjct 400325 ATCATGGTTCCACCCCTGAGCCTCAAGACCAGGTGGAGAGTGGACTCTTTCTGGATGTTG 400266
Query 34806 TAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGG 34865
||||| | ||| ||||| |||| || ||||| || || |||||||| || | ||| ||
Sbjct 400265 TAGTCTGCTAGGGTTCGTCCATCTTCTAGCTGCTTCCCAGCAAATATCAGCCTTTGTTGA 400206
Query 34866 TCTTGCGGCACCCCCTCCTTGTC 34888
|| | || | |||||||||||
Sbjct 400205 TCAGGTGGTATGCCCTCCTTGTC 400183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324585137174472
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