Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tarenaya_20hassleriana_20[refseq_20GCF_5F000463585.1_202013-09-05]
12,249 sequences; 249,929,577 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq11203 100 3e-16
>seq11203
Length=4714577
Score = 100 bits (110), Expect = 3e-16
Identities = 121/165 (73%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
||||||||| || || || ||| |||| || | || ||| || || | || || | ||
Sbjct 1280975 CATTGCCTCCGCAGCAGCGGTTCCTTCGTCGAGTAAAGAGGCATTCGACATGGGGAGACC 1280916
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
|| || |||||||| | ||| || |||||| | || ||| | || ||||| |||||
Sbjct 1280915 AGTGAGATCTGTGATCATCGTCTGAAAATTGAGCAGAGATTCAAGCCTGCCCTGCGATAT 1280856
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTC 140023
|||||| ||||| || ||||| ||||||||| |||||||||
Sbjct 1280855 CTCAGCCTGATACGGTGTGTATTGAGTGTACCAAGCAGGATTCTC 1280811
Score = 91.5 bits (100), Expect = 2e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221
||||||| | ||| || |||||||||||||| | || ||||| |||||||||||
Sbjct 1283719 AATGGTGCCAAATGCTTCTTAACACCAATAGGACCCATACCCGGACCGCCACCTCCATGA 1283660
Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCA 138269
||||||||||| ||||| || | ||| ||||| || ||||| || |||
Sbjct 1283659 GGAATACAGAAGGTCTTGTGAAGATTGAGATGGCAAACATCAGCTCCA 1283612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578909748107480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |