Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tarenaya_20hassleriana_20[refseq_20GCF_5F000463585.1_202013-09-05] 12,249 sequences; 249,929,577 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq5510 86.0 7e-12 >seq5510 Length=2415207 Score = 86.0 bits (94), Expect = 7e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 151995 GATGACCAGTACATCTTGGATGCTGCTGAGGAACAAGGAGTTGATATGAACTACTCTTGT 152054 || || |||||||| ||||||| || ||||| |||||| || || ||||||||| Sbjct 935668 GAGGATCAGTACATACTGGATGCAGCAGAGGAGGCAGGAGTCGAGCTGCCCTACTCTTGC 935609 Query 152055 CGTGCTGGTGCATGTTCCTCTTGTGCTGGTAAGATTGTGAGTGGTACAGTTGATCAGAGT 152114 | ||||| ||||||||| | ||||| || ||| | | | || || || || || | Sbjct 935608 AGGGCTGGCGCATGTTCCACCTGTGCCGGGAAGCTAGCGTCAGGCACTGTCGACCAATCT 935549 Query 152115 GACCAATCATTCTTGGATGATGACCAGATTGAATCAGGATTCGTGCTGACCTGTGTTGCA 152174 ||| || ||| | || || | | |||||| ||| | || ||||||||||| || Sbjct 935548 GACGGCTCGTTCCTTGACGACAATCTCATTGAACAAGGTTATGTCCTGACCTGTGTGGCT 935489 Query 152175 TATCC 152179 ||||| Sbjct 935488 TATCC 935484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549538245940280