Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tarenaya_20hassleriana_20[refseq_20GCF_5F000463585.1_202013-09-05] 12,249 sequences; 249,929,577 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq5510 111 2e-19 >seq5510 Length=2415207 Score = 111 bits (122), Expect = 2e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 138529 GATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGT 138588 || ||||||||||| || ||||| || || || ||||| | || || |||||||| || Sbjct 935668 GAGGATCAGTACATACTGGATGCAGCAGAGGAGGCAGGAGTCGAGCTGCCCTACTCTTGC 935609 Query 138589 CGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCT 138648 | ||||| |||||||| |||||||| || || ||| ||| ||||| || || ||| Sbjct 935608 AGGGCTGGCGCATGTTCCACCTGTGCCGGGAAGCTAGCGTCAGGCACTGTCGACCAATCT 935549 Query 138649 GACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATGACTTGCGTAGCA 138708 ||| || |||||||| || | | |||| | ||| | | || |||| || || || Sbjct 935548 GACGGCTCGTTCCTTGACGACAATCTCATTGAACAAGGTTATGTCCTGACCTGTGTGGCT 935489 Query 138709 TACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACTATACTGA 138762 || ||| |||||| ||| | || | || | || || |||||| | |||| Sbjct 935488 TATCCCCAATCCGACTGTGTGATCCACACCCACAAGGAAACCGAACTCTTCTGA 935435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605574464780840