Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tarenaya_20hassleriana_20[refseq_20GCF_5F000463585.1_202013-09-05]
12,249 sequences; 249,929,577 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq5186 149 5e-30
seq6747 140 2e-27
seq7521 127 2e-23
seq11203 125 5e-23
seq3309 125 5e-23
seq6695 123 2e-22
seq2 123 2e-22
seq1 95.1 9e-14
seq5835 87.8 1e-11
>seq5186
Length=9353477
Score = 149 bits (164), Expect = 5e-30
Identities = 307/454 (68%), Gaps = 12/454 (3%)
Strand=Plus/Plus
Query 282018 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 282077
|||||| ||| ||| ||| ||||| | || || | || || || | ||||| || |
Sbjct 5347127 AATCAACTCCCTCGTGCAAGGAATCGATCTCGATGCTCGTCTGCGTGGTGGAAGAGAGCG 5347186
Query 282078 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCA 282137
| | || || | || ||||| ||||| || || | ||| || | || | | | |
Sbjct 5347187 CCCTCTTCGCTCTCTCGCATGCAGTCCTCAGCCTCCTTAAAGCCCTAGCGTTTCCACTGA 5347246
Query 282138 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATC 282195
||| | || | ||| |||||||| ||| |||| | ||| | ||||| | || ||
Sbjct 5347247 TATCCTTCTTGTGTTTCCTCTTGAACTCTGCAACGAA--ATGGTTCACAAGCCTGTTGTC 5347304
Query 282196 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 282255
||||||||||||||||| | || | ||| | ||||||| | || | ||| | || ||
Sbjct 5347305 GAAATCTTCACCTCCCAAGTGGGTGTCTCCCGCCGTAGCTTTCACCTCGAACACGCCTTC 5347364
Query 282256 TTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 282315
||| | | ||| || | |||||| |||||||| |||| ||| ||||| || |||||
Sbjct 5347365 TTCGATCGTCAACAGCGAAACATCGAATGTTCCACCGCCCAGATCGAAAATCAGAACATT 5347424
Query 282316 CATTTC-------TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368
| | || |||||| || || || | |||||||||| || || || || |
Sbjct 5347425 CCTCTCGCCGGATTTTGTC-CCTTTCTTGTCCAACCCATACGCAATCGCCGCCGCTGTCG 5347483
Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428
| || || || || |||| ||| || || || || ||| ||| || || || || || |
Sbjct 5347484 GCTCGTTGATTATCCTCAGAACGTTGAGCCCTGCGATTGCTCCGGCGTCCTTCGTCGCCT 5347543
Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462
|||| || || ||||| || || || || || ||
Sbjct 5347544 GTCTCTGCGAGTCGTTGAAGTAAGCTGGCACCGT 5347577
Score = 113 bits (124), Expect = 3e-19
Identities = 245/364 (67%), Gaps = 12/364 (3%)
Strand=Plus/Plus
Query 282018 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 282077
|||||| ||| ||| ||| ||||| | || || | || || || | ||||| || |
Sbjct 5352393 AATCAACTCCCTCGTGCAAGGAATCGATCTCGATGCTCGTCTGCGTGGTGGAAGAGAGCG 5352452
Query 282078 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCA 282137
| | || || | || ||||| ||||| || || | ||| || | || | | | |
Sbjct 5352453 CCCTCTTCGCTCTCTCGCATGCAGTCCTCAGCCTCCTTAAAGCCCTAGCGTTTCCACTGA 5352512
Query 282138 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATC 282195
||| | || | ||| |||||||| ||| |||| | ||| | ||||| | || ||
Sbjct 5352513 TATCCTTCTTGTGTTTCCTCTTGAACTCTGCAACGAA--ATGGTTCACAAGCCTGTTGTC 5352570
Query 282196 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 282255
||||||||||||||||| | || | ||| | ||||||| | || | ||| | || ||
Sbjct 5352571 GAAATCTTCACCTCCCAAGTGGGTGTCTCCCGCCGTAGCTTTCACCTCGAACACGCCTTC 5352630
Query 282256 TTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 282315
||| | | ||| || | |||||| |||||||| |||| ||| ||||| || |||||
Sbjct 5352631 TTCGATCGTCAACAGCGAAACATCGAATGTTCCACCGCCCAGATCGAAAATCAGAACATT 5352690
Query 282316 CATTTC-------TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368
| | || |||||| || || || | ||||||||||| || || || || |
Sbjct 5352691 CCTCTCGCCGGATTTTGTC-CCTTTCTTGTCCAAACCATACGCAATCGCCGCCGCTGTCG 5352749
Query 282369 GTTC 282372
| ||
Sbjct 5352750 GCTC 5352753
>seq6747
Length=1176643
Score = 140 bits (154), Expect = 2e-27
Identities = 310/462 (67%), Gaps = 10/462 (2%)
Strand=Plus/Minus
Query 282018 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTG 282077
||||||| || ||| ||| ||| |||| ||||| || || |||| | || || || |
Sbjct 326494 AATCAATACCCTCGTACAGAGAGTCAATCTCAATGGTGGTCTGAGCTGTGGACGACAGGG 326435
Query 282078 CACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATT 282135
| ||||| | ||||| ||||| || | || || | |||| | | | || | |
Sbjct 326434 TCCTCTTAGCTCTCTCACAGGCTGTTCTCAACCTCCGGAGGGCTCTCG--GGTTACCACT 326377
Query 282136 CAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATC 282195
| || | || | || |||||||| || | |||| | | || | | || ||
Sbjct 326376 GATGTCCTTCTTGTTCTTCCTCTTGAACTCCTGAACAAAGTGGTTGACCATTCTGTTGTC 326317
Query 282196 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 282255
||| |||||||| || | | ||| | ||| | || ||| | || | ||| | || ||
Sbjct 326316 AAAGTCTTCACCACCGAGATGAGTGTCTCCAGCAGTGGCTTTAACCTCGAAGATACCCTC 326257
Query 282256 TTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 282315
||||| || | ||||| |||||| ||| |||||||| | ||||||||| | |||||
Sbjct 326256 TTCAATAGTGAGAAGAGAGACATCAAAGGTACCACCACCGAGATCAAAAATCAAGACATT 326197
Query 282316 CATTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 282369
| | || | |||| | || ||||||||||| |||| |||||||| || ||
Sbjct 326196 CTTCTCACCAACACTGGTAGCCTTCTTGTCAAGACCATAGGCAATGGCAGCAGCCGTAGG 326137
Query 282370 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 282429
||||| || || | || ||||| | |||||||| || ||||| || ||||||||
Sbjct 326136 CTCATTGATGATACGCATGACATTCAACCCAGCAATGACACCGGCATCCTTTGTGGCTTG 326077
Query 282430 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471
| || || || || || || || |||||||| | |||||
Sbjct 326076 GCGCTGGGAGTCATTGAAGTAAGCTGGAACAGTGACCACGGC 326035
>seq7521
Length=6323785
Score = 127 bits (140), Expect = 2e-23
Identities = 311/465 (67%), Gaps = 16/465 (3%)
Strand=Plus/Minus
Query 282018 AATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG---AGTCGAAGAAGATA 282074
|||| || || || |||| ||||||| |||||||| || || |||||| ||| | |
Sbjct 4884194 AATCGATACCCTCATACAAGGAATCAATCTCAATCGTGGTCTGGGCAGTCGATGAA-AGA 4884136
Query 282075 GTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT 282134
|| | | || || | ||||| ||||| || | ||| | | ||| | | | |||
Sbjct 4884135 GTCCTCTTT--GCCCTCTCACAGGCTGTTCTCAATCTCCTGAGAGCTCTAG--GGTTGCC 4884080
Query 282135 TCAAATCTGTTTTATATT--TTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATT 282192
| || | || | || |||||||||| || | ||| | | || | | ||
Sbjct 4884079 GCTGATGTCCTTCTTGTTCTTTCTCTTGAATTCCTGGACAAAGTGGTTGACCATTCTGTT 4884020
Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252
||| ||||||||||| || | | || | || | || ||| | || | ||||| ||
Sbjct 4884019 ATCGAAATCTTCACCGCCGAGATGGGTGTCCCCGGCAGTGGCTTTCACCTCGAAAATACC 4883960
Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312
|| |||| | | ||||| |||||| ||| |||||||| | ||| || || | ||
Sbjct 4883959 CTCCTCAATGGTGAGAAGAGAGACATCAAAGGTACCACCACCAAGATCGAAGATCAAGAC 4883900
Query 282313 ATTCATTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCAGT 282366
||| | || | | |||| | || || |||||||| |||| ||||||||||||
Sbjct 4883899 GTTCTTCTCGCCGACACTGGTAGCTTTCTTGTCGAGACCATAGGCAATAGCAGCAGCAGT 4883840
Query 282367 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 282426
|| || || || || | || ||||| ||||||||||| || || || || |||||
Sbjct 4883839 AGGCTCGTTGATGATACGCATCACATTCAGACCAGCAATGACACCAGCGTCCTTTGTGGC 4883780
Query 282427 TTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471
||| | ||| |||||||| || || || || ||||| | ||| ||
Sbjct 4883779 TTGACGTTGGGAATCGTTGAAGTAAGCTGGGACAGTGACAACAGC 4883735
Score = 122 bits (134), Expect = 7e-22
Identities = 596/928 (64%), Gaps = 34/928 (4%)
Strand=Plus/Minus
Query 281555 CGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAAT 281614
||||| || ||| | | ||||||| || | | || || ||||||||||| | |||
Sbjct 6206279 CGTTCCCCTTCGTAGACTTGGATAAGTACACCGGGCTGGTTGTCTGAATAAGTCGAAAAG 6206220
Query 281615 ACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACC 281673
|| ||| ||| || ||||| || |||||||| |||| ||||| | |||
Sbjct 6206219 AC-CTGTTCTTTCTTGGTCGGAATGGTCGTGTTTCTCGGGATAAGCACAGTCATGACACC 6206161
Query 281674 ACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATA--TTTTGA 281731
|| ||||| || | ||| ||||| | || |||||||| | || |||| | | |||
Sbjct 6206160 GCCTGCTGTCTCAAGACCCAGAGACAAGGGGGTGACATCCAATA--ACAAGAGGTCTTGG 6206103
Query 281732 AGTTTTTCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 281790
| || || | || ||| ||||| | || ||||||| || |||||||| || ||
Sbjct 6206102 ACCTTCTCGTTGCCTTCACCGCTCAAGA-TGGCAGCTTGAACGGCCGCACCATAGGCCAC 6206044
Query 281791 AGCTTCATCAGGATTAA--CAGTTTCATTTAGTTTTTTACCATTGAAAAAATT-TGAAAG 281847
||| || || ||||||| | || || || | || |||||||| || | || ||
Sbjct 6206043 AGCCTCGTCTGGATTAATGCTCTTGCAA--AGCTCCTTGCCATTGAAGAAGTCCTGCAA- 6205987
Query 281848 AAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTG 281907
||| ||| ||||| || || | || || || ||||| | || | ||||| ||
Sbjct 6205986 AAGCTGTTGAACCTTGGGGATTCTAGTGGAGCCACCAACGAGGACGACGTCATGAACGC- 6205928
Query 281908 TGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAA 281966
|| | || |||| || | || ||| || |||||||| || | || || |
Sbjct 6205927 TGCTCTTGTCCATCTTAGCGTCTCGCAAACACTTCTCAACGGGCTCCATACATTTCCTGA 6205868
Query 281967 ACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTC 282026
| | || ||||| |||||| | || | || | || | |||| || |
Sbjct 6205867 AGAGATCCATGTTGAGTTCCTCGAATCTCGCACGGGTGATGGTTGTGTAGAAATCGATAC 6205808
Query 282027 CTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAG 282086
| ||| |||| ||||||| || || || ||||||| | || || || | | || |
Sbjct 6205807 CCTCGTACAAGGAATCAATCTCGATGGTGGTTTGAGCAGTGGAGGAGAGAGTTCTCTTGG 6205748
Query 282087 CACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA--TCTGT 282144
| | |||||||||||||| | || | | ||| || |||| | || ||| |
Sbjct 6205747 CTCTCTCACATGCTGTCCTCAACCTCCTCAGAGCTCGTG--GATTCCCGCTAATGTCTTT 6205690
Query 282145 TTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCAAAATCT 282202
|| | || |||||||| |||| ||| | ||| | || | | || || |||||
Sbjct 6205689 CTTGTGCTTCCTCTTGAACTCTTGAACGAA--ATGGTTCACCATCCTGTTGTCGAAATCC 6205632
Query 282203 TCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAA-- 282260
|| || || | | ||| | || | ||| || | |||| ||| | || ||||| |
Sbjct 6205631 TCGCCACCAAGGTGAGTGTCACCAGCCGTTGCCTTCACTTCGAAGATACCCTCTTCGATC 6205572
Query 282261 GAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTT 282320
| || ||||| || || || |||||||||| |||||| || | || ||| | |
Sbjct 6205571 GTGAGCAAAGA--CACGTCGAAAGTACCACCACCCAGATCAAAGATCAACACGTTCTTCT 6205514
Query 282321 CTTTGTC------TTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 282374
| | | | || || |||||||| ||||| | || || || || || || |
Sbjct 6205513 CACCGACACTCGATGCCTTCTTGTCAAGACCGTACGCGATTGCTGCTGCGGTCGGCTCGT 6205454
Query 282375 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 282434
| || || | || |||||| || ||||| || || || ||||| || ||||| | |
Sbjct 6205453 TGATGATACGCATAACATTGAGGCCAGCGATCACACCAGCGTCTTTGGTAGCTTGACGCT 6205394
Query 282435 GTGAATCGTTAAAATATGCAGGAACAGT 282462
| || ||||| ||||| ||||| |||||
Sbjct 6205393 GAGAGTCGTTGAAATAAGCAGGTACAGT 6205366
>seq11203
Length=4714577
Score = 125 bits (138), Expect = 5e-23
Identities = 134/177 (76%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 282343 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 282402
|||||| | | ||||||||| || |||||||| || || ||| |||| |||||||||
Sbjct 3318683 ACCATATGATAGAGCAGCAGCTGTCGGTTCATTGATGATCCTCTGCACATCAAGACCAGC 3318624
Query 282403 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462
||||| || ||||| || |||||||||||||| | |||||| ||||| || ||||||||
Sbjct 3318623 GATTCTCCCAGCATCCTTTGTGGCTTGTCTTTGAGCATCGTTGAAATAAGCTGGAACAGT 3318564
Query 282463 AATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTT 282519
|||||| || | || | ||| |||| || || || |||| ||||||||
Sbjct 3318563 AATAACAGCTTTGGTGATAGTTTTCCCAAGGTATGCTTCAGCAGTTTCCTTCATTTT 3318507
>seq3309
Length=3363706
Score = 125 bits (138), Expect = 5e-23
Identities = 134/177 (76%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 282343 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 282402
|||||| | | |||||||| |||||||| || || || ||| |||| |||||||||
Sbjct 2506354 ACCATATGACAGGGCAGCAGCTGTTGGTTCGTTGATGATCCTCTGGACATCAAGACCAGC 2506413
Query 282403 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462
||||| || ||||| |||||||||||||| |||| ||| || ||||| |||||||||||
Sbjct 2506414 GATTCTCCCAGCATCCTTAGTGGCTTGTCTCTGTGCATCATTGAAATAAGCAGGAACAGT 2506473
Query 282463 AATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTT 282519
|||||| || | || | ||| |||| || || || |||| ||||||||
Sbjct 2506474 AATAACAGCTTTGGTGATAGTTTTCCCAAGGTATGCTTCGGCAGTTTCCTTCATTTT 2506530
Score = 93.3 bits (102), Expect = 3e-13
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 86118 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 86177
||| |||| || || || || |||||||| || || || | | ||||| | ||| ||
Sbjct 2506354 ACCATATGACAGGGCAGCAGCTGTTGGTTCGTTGATGATCCTCTGGACATCAAGACCAGC 2506413
Query 86178 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 86237
||| | ||| ||| ||| |||||||||||||| ||||| ||||| || || |||||
Sbjct 2506414 GATTCTCCCAGCATCCTTAGTGGCTTGTCTCTGTGCATCATTGAAATAAGCAGGAACAGT 2506473
Query 86238 AATAACTGCTTTATTAATAGGTTT 86261
|||||| ||||| | |||| |||
Sbjct 2506474 AATAACAGCTTTGGTGATAGTTTT 2506497
>seq6695
Length=6602074
Score = 123 bits (136), Expect = 2e-22
Identities = 195/278 (70%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250
|| |||||||||||||| || | | || | || | |||||| | || | ||| |
Sbjct 876997 TTGTCAAAATCTTCACCACCAAGATGGGTGTCACCGGCGGTAGCTTTCACCTCGAAGATA 876938
Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310
|| ||||||| | | ||||| |||||| ||| |||||||| | |||||| || |
Sbjct 876937 CCCTCTTCAATGGTGAGAAGAGAGACATCAAAGGTACCACCACCGAGATCAAAGATCAAG 876878
Query 282311 ACATTCATTTCTTTGTCT-TGGT-----TTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364
|| ||| | || | | |||| | || |||||||| || |||| |||||| ||
Sbjct 876877 ACGTTCTTCTCACCGACACTGGTAGCTTTCTTGTCAAGACCGTAAGCAATAGCAGCCGCC 876818
Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424
|| ||||| ||||| || | || ||| || | ||||||||| || || || || |||
Sbjct 876817 GTAGGTTCGTTAATGATACGCATAACGTTCAAACCAGCAATGACACCAGCGTCCTTTGTG 876758
Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462
||||| | || || ||||| || || |||||||||||
Sbjct 876757 GCTTGACGCTGGGAGTCGTTGAAGTAAGCAGGAACAGT 876720
>seq2
Length=4120898
Score = 123 bits (136), Expect = 2e-22
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 282343 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 282402
|||||| | || ||||| || || ||||| || ||||||||| |||| |||||||||
Sbjct 1312172 ACCATAAGAAAGCGCAGCTGCTGTGGGTTCGTTTATAATTCTCTCCACATCAAGACCAGC 1312231
Query 282403 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462
|||||| ||||||||||| || || |||||||| | ||| || |||||||| || |||||
Sbjct 1312232 AATTCTACCTGCATCTTTTGTTGCCTGTCTTTGAGCATCATTGAAATATGCTGGCACAGT 1312291
Query 282463 AATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACT 282522
||||| || | | || ||| || | ||||| ||| || | |||||| || |
Sbjct 1312292 GATAACAGCCTTGGAAACAGATTTCCCGAGGTAAGCCTCTGCAGTCTCTTTCATCTTTGT 1312351
Query 282523 TAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCT 282560
| || | || |||||| ||||| |||||||
Sbjct 1312352 AAGAACAAATGCACCAATTTGGCTAGGAGAGTATTGCT 1312389
>seq1
Length=11827220
Score = 95.1 bits (104), Expect = 9e-14
Identities = 148/209 (71%), Gaps = 6/209 (3%)
Strand=Plus/Minus
Query 282274 AACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTT 282333
||||||| || |||||||| | |||||| | || | | |||| ||| ||| ||
Sbjct 2619634 AACATCAAAAGTACCACCACCAAGATCAAAGACTAGAA---TTGTTTCATTG-CTT--TT 2619581
Query 282334 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393
| | |||| ||||| || || | |||||| || || ||||| ||||| | | ||| |
Sbjct 2619580 TCTCTCAAACCCATAAGCCAAGGAAGCAGCTGTAGGCTCATTGATAATCCGAAGAACTTC 2619521
Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453
| |||||||| | || |||||||| || ||| || ||||||||||| || || ||
Sbjct 2619520 CAACCCAGCAATGCGACCAGCATCTTTTGTAGCTGTCCTCTGTGAATCGTTGAAGTAAGC 2619461
Query 282454 AGGAACAGTAATAACGGCATCTGTTACTT 282482
||| ||||| || || || | || ||||
Sbjct 2619460 AGGCACAGTGATTACAGCTTTGGTAACTT 2619432
>seq5835
Length=2231668
Score = 87.8 bits (96), Expect = 1e-11
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 637124 TTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAA 637183
|||| |||| ||| || || |||||||| |||||||||||| ||||||| |||||||| |
Sbjct 447550 TTGTTGATTTTTCCTCGCCCAATATTGCAAAAGAAATGCATGTTGGACACTTAAGATCTA 447609
Query 637184 CTATTATTGGTGA 637196
| |||||||||||
Sbjct 447610 CAATTATTGGTGA 447622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740029025864274
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