Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tarenaya_20hassleriana_20[refseq_20GCF_5F000463585.1_202013-09-05] 12,249 sequences; 249,929,577 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq5991 82.4 8e-11 >seq5991 Length=8924634 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 142654 CTGTCATGCCAGCTGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATT 142713 |||||||| || |||||||||||||||| ||| | |||||| || || || |||||| Sbjct 5844264 CTGTCATGTCAAATGTATCAGCGTTCGGCTGACATGGGCCTCGGTGTACCATTTAACATT 5844205 Query 142714 GCTTCGTACGCGCTTCTCAC 142733 ||||||||| | |||||||| Sbjct 5844204 GCTTCGTACTCCCTTCTCAC 5844185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500422567316240