Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tarenaya_20hassleriana_20[refseq_20GCF_5F000463585.1_202013-09-05]
12,249 sequences; 249,929,577 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq5186 136 2e-27
seq6636 116 2e-21
seq7521 113 3e-20
seq6695 109 3e-19
seq1 104 1e-17
seq10304 91.5 9e-14
seq5265 89.7 3e-13
>seq5186
Length=9353477
Score = 136 bits (150), Expect = 2e-27
Identities = 163/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|||||||||||||| ||||| || |||||| || ||||| ||||| | ||| || ||
Sbjct 7865809 AGACGCAACACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGCAAGAGTACGA 7865868
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || ||||||||||| || | | ||| |||||||| || | ||||||
Sbjct 7865869 CCATCCTCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATACCCTCC 7865928
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| || | ||| ||| | || ||||| ||||||||| |||| ||
Sbjct 7865929 TTGTCCTGGATC-TTGGCTTTCACGTTGTCGATGGTGTCGGAGCTCTCCACCTCCAACGT 7865987
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || |||||||| | || |||||||| ||||||||
Sbjct 7865988 GATGGTCTTACCGGTCAGGGTCTTCACAAAGATCTGCAT 7866026
Score = 114 bits (126), Expect = 8e-21
Identities = 145/194 (75%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574
|||||| || ||||| || || | |||||| || |||| || || || || || || ||
Sbjct 7865607 CTCCTTCTGGATGTTGTAGTCCGCAAGTGTACGGCCGTCCTCCAGCTGCTTTCCAGCGAA 7865666
Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGT-CTGTGATCTTTTGTTTTAACG 34633
||| | |||||| |||||||| || | ||||||||||| |||| ||| || | || |||
Sbjct 7865667 TATCAGACGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGT-ATC-TTCGCCTTCACG 7865724
Query 34634 AT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTC 34692
| || ||||| |||||||||||||| || || || |||||||| | || |||
Sbjct 7865725 TTGTCGATCGTGTCCGAGCTCTCCACTTCCAGTGTGATAGTCTTACCGGTCAGGGTCTTC 7865784
Query 34693 ACAAAAATCTGCAT 34706
|| || ||||||||
Sbjct 7865785 ACGAAGATCTGCAT 7865798
Score = 104 bits (114), Expect = 1e-17
Identities = 156/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||||||||||||| |||||| || ||||| || || | ||| || ||
Sbjct 7866493 AGACGAAGAACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCGA 7866552
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || ||||| || || ||||| || || | | ||| |||||||| || | |||||
Sbjct 7866553 CCATCCTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGAGGAATACCCTCT 7866612
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| || | || ||| | ||| ||||| |||||| || |||| ||
Sbjct 7866613 TTGTCCTGGATC-TTGGCCTTTACGTTGTCAATGGTGTCGGAGCTCTCAACCTCCAACGT 7866671
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| ||||| || | || || || || || |||||
Sbjct 7866672 GATCGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCAT 7866710
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| ||||| ||| || || || || ||||| || || ||||| | ||||| || ||
Sbjct 4547339 TGAAGAGTCGACTCTTTCTGTATATTGTAATCGGACAGAGTTCGTCCATCTTCGAGCTGC 4547280
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| ||||| ||||| | | ||||||||| |||| | |||||||||||| ||| ||
Sbjct 4547279 TTTCCGGCGAATATCAGCCTCTGTTGGTCGGGCGAGATTCCCTCCTTGTC-CTGAATCTT 4547221
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || ||| | || ||||| ||| || || |||| ||||| ||||| |||||
Sbjct 4547220 CGACTTCACGTTCTCGATCGTGTCCGAGCTTTCAACCTCCAGTGTTATGGTTTTTCCGGT 4547161
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
| || ||||| |||||||||||
Sbjct 4547160 GAGGGTCTTCACGAAAATCTGCAT 4547137
Score = 100 bits (110), Expect = 2e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||||||||| || ||| || |||||||| || || | || ||||
Sbjct 7866721 AGACGAAGAACCAAATGGAGGGTTGACTCTTTCTGAATGTTGTAGTCAGCGAGGGTTCTG 7866780
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| || ||||| ||||| ||||| || || | ||| ||||| || || | ||||||
Sbjct 7866781 CCGTCCTCCAGTTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATCCCCTCC 7866840
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| ||| ||||| || ||| | |||||||| |||||| || || | ||
Sbjct 7866841 TTGTCCTGGAT-TTTTGCCTTGACGTTGTCGATTGTGTCGGAGCTCTCGACCTCAAGAGT 7866899
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || | || || || || ||||||||
Sbjct 7866900 GATTGTCTTGCCTGTGAGGGTCTTAACGAAGATCTGCAT 7866938
Score = 87.8 bits (96), Expect = 1e-12
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||| ||||| || ||| || || ||||| || || | || || ||
Sbjct 7866037 AGACGGAGAACCAAGTGGAGGGTAGACTCTTTCTGGATGTTGTAGTCGGCCAGGGTGCGT 7866096
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || || ||||| || || | | || |||||||| || | ||||||
Sbjct 7866097 CCATCCTCCAGCTGCTTCCCGGCGAAAATCAGCCTTTGCTGGTCCGGGGGAATACCCTCC 7866156
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| |||| || | || ||| | || ||||| ||||||||| || | |||
Sbjct 7866157 TTGTCTTGGATC-TTGGCCTTTACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGT 7866215
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| || |||||||| | || || || || |||||||||
Sbjct 7866216 AATAGTCTTACCGGTGAGGGTCTTGACGAAGATCTGCATG 7866255
>seq6636
Length=1297912
Score = 116 bits (128), Expect = 2e-21
Identities = 167/233 (72%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537
|||| ||||| ||||| | ||||| ||||| || ||||| || ||||| || || |
Sbjct 787815 CGCCTCCTCTGAGACGGAGAACCAAGTGGAGCGTCGATTCCTTCTGGATGTTGTAGTCGG 787874
Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597
||||| || |||| || ||||| || ||||| || || || ||||| ||||||||||
Sbjct 787875 CGAGTGTCCGACCGTCCTCCAGTTGCTTCCCGGCGAAGATCAATCGCTGCTGGTCCGGCG 787934
Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656
| | ||| |||||||| ||| || | || || | || ||||| | |||
Sbjct 787935 GGATTCCTTCCTTGTC-CTGAATCTTGGCCTTCACATTGTCGATCGTGTCGGAGGACTCG 787993
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
|| || | |||||| || || || || | |||||||||||||||||||| ||
Sbjct 787994 ACCTCTAGGGTTATAGTCTTCCCCGTAAGGGTTTTCACAAAAATCTGCATCTT 788046
>seq7521
Length=6323785
Score = 113 bits (124), Expect = 3e-20
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | || | ||| || || |||||| || ||||| ||||| | | || ||
Sbjct 4430033 AGACGGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCCAAAGTACGA 4430092
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| || || || || ||||| || | | ||| ||||||||||| | ||||||
Sbjct 4430093 CCATCTTCCAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCCGGCGGTATCCCCTCC 4430152
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| |||| || | || || || || |||||| ||||||||| |||| ||
Sbjct 4430153 TTGTCTTGGATC-TTCGCCTTCACATTATCGATCGTGTCTGAGCTCTCCACCTCCAATGT 4430211
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||||| || || || || || |||||||| ||||||||
Sbjct 4430212 TATCGTCTTCCCCGTCAATGTCTTCACAAAGATCTGCAT 4430250
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | || | |||| ||||| || ||||||||| ||||| || || |
Sbjct 4430936 CCACCTCTCAACCGGAGAACCAGGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGCC 4430995
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || | ||||| || ||||| |||||||| || | | || |||||||| ||
Sbjct 4430996 AAGGTGCGGCCATCTTCGAGCTGTTTTCCGGCAAAGATAAGCCTTTGCTGGTCCGGAGGA 4431055
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| ||| |||||||| ||| ||||| ||||| | ||| ||||| |||||| ||
Sbjct 4431056 ATTCCTTCCTTGTCCTGGAT-TTTTGCCTTAACATTGTCAATGGTGTCCGAGCTCTCGAC 4431114
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | ||| || || || ||||| | ||||||||||| || |||||
Sbjct 4431115 TTCAAGGGTGATGGTCTTTCCGGTGAGTGTTTTCACAAAGATTTGCAT 4431162
Score = 91.5 bits (100), Expect = 9e-14
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||| | ||| || || ||||| || || || ||||| | || ||||
Sbjct 4430261 AGACGGAGCACGAGATGAAGGGTTGATTCCTTCTGGATATTGTAATCCGCTAGGGTTCTT 4430320
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| || || || || || ||||| || | | ||| |||||||| || | ||||||
Sbjct 4430321 CCGTCCTCCAGCTGCTTCCCTGCAAAGATGAGTCTCTGCTGGTCCGGGGGAATACCCTCC 4430380
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| ||| |||| ||| || | |||||||| |||||| || |||| ||
Sbjct 4430381 TTGTCT-TGAATCTTTGCTTTCACATTGTCGATTGTGTCCGAGCTCTCTACCTCCAGAGT 4430439
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || | || |||||||| ||||||||
Sbjct 4430440 GATGGTCTTGCCCGTGAGTGTCTTCACAAAGATCTGCAT 4430478
Score = 86.0 bits (94), Expect = 4e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||||||| |||||| || || || ||||| | ||| |||| |||| || || ||
Sbjct 4430504 TGGAGAGTGGACTCCTTCTGGATATTGTAATCCGCAAGGGTTCTTCCGTCCTCGAGCTGC 4430563
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| |||||||| || | | || ||||| || || | || || ||||| ||||||
Sbjct 4430564 TTCCCGGCAAAGATGAGCCTTTGCTGGTCAGGTGGGATCCCTTCTTTGTCCTGGATCTTA 4430623
Query 34624 TGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || || | ||| ||||| ||||||||| || | ||| || || || || ||
Sbjct 4430624 -GCCTTGACATTGTCAATAGTGTCCGAGCTCTCCACCTCGAGGGTGATGGTCTTCCCAGT 4430682
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
| || ||||| |||||||||||
Sbjct 4430683 AAGGGTCTTCACGAAAATCTGCAT 4430706
>seq6695
Length=6602074
Score = 109 bits (120), Expect = 3e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||||||||||||| || || || || || ||||| | ||| || |
Sbjct 810446 AGACGAAGGACCAAATGGAGAGTGGATTCTTTCTGGATATTGTAATCAGCAAGGGTCCTT 810387
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| || || ||||| || ||||| || | | || |||||||| || | ||| |||
Sbjct 810386 CCGTCCTCGAGCTGTTTGCCAGCAAAGATAAGCCTTTGCTGGTCCGGAGGGATTCCTTCC 810327
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| |||| || ||| | ||| || || |||||| || || | |||
Sbjct 810326 TTGTCCTGGATC-TTTGCCTTCACGTTGTCAATGGTATCAGAGCTCTCAACCTCGAGGGT 810268
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||||||| ||||| | || ||||| || ||||||||
Sbjct 810267 GATCGTTTTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 810229
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | |||| ||||| ||| ||||| || || || || || | |
Sbjct 810683 CCACCGCGAAGACGGAGAACCAGGTGGAGGGTGGATTCCTTCTGGATATTGTAGTCAGCA 810624
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| | || || || ||||| || ||||| || | | |||||||||||| ||
Sbjct 810623 AGGGTTCGTCCATCCTCCAGCTGTTTGCCAGCAAAGATGAGTCTCTGTTGGTCCGGAGGG 810564
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| ||| ||||| || |||| |||| || || || ||||||||| ||| || ||
Sbjct 810563 ATTCCTTCCTTATCCTGGATC-TTTGCCTTGACATTATCAATTGTGTCAGAGCTTTCAAC 810505
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||| || ||||| ||||| | || || || || ||||||||
Sbjct 810504 CTCGAGGGTGATTGTTTTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 810457
Score = 98.7 bits (108), Expect = 6e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | || | |||| |||||||| |||||||| ||||| || || |
Sbjct 804867 CCACCTCTTAACCGGAGAACCAGGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCGGCC 804808
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || | || ||||| ||||| |||||||| || | | || |||||||| ||
Sbjct 804807 AAGGTGCGGCCATCCTCAAGCTGTTTGCCGGCAAAGATAAGCCTTTGCTGGTCCGGAGGG 804748
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| ||| |||||||| ||||||| | ||| || | ||| ||||| ||||| ||
Sbjct 804747 ATTCCTTCCTTGTCCTGGATCTTT-GCTTTGACATTGTCAATGGTGTCCGAACTCTCAAC 804689
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || || || ||||| | ||||||||||| || |||||
Sbjct 804688 TTCGAGAGTGATGGTCTTGCCGGTGAGGGTTTTCACAAATATTTGCAT 804641
Score = 98.7 bits (108), Expect = 6e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | || | |||| |||||||| |||||||| ||||| || || | |
Sbjct 805095 CCACCTCTCAACCGGAGAACCAGGTGGAGAGTTGATTCCTTTTGGATGTTGTAGTCAGCA 805036
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || | | ||||| || || ||||| ||||| || | | ||||||||| || ||
Sbjct 805035 AGGGTCCTTCCATCTTCGAGCTGCTTACCAGCAAAGATGAGTCTCTGTTGGTCTGGAGGG 804976
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659
| ||| || |||||| |||||| |||| ||| ||||| ||| || ||
Sbjct 804975 ATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTGTCAATGGTGTCGGAGCTTTCAACC 804916
Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||| |||||||||||||| | || || || || ||||||||
Sbjct 804915 TCGAGGGTGATCGTTTTACCGGTAAGAGTCTTTACGAAGATCTGCAT 804869
Score = 98.7 bits (108), Expect = 6e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | || | |||| |||||||| |||||||| ||||| || || |
Sbjct 809999 CCACCTCTTAACCGGAGAACCAGGTGGAGAGTCGATTCCTTTTGGATGTTGTAGTCGGCC 809940
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || | || ||||| ||||| |||||||| || | | || |||||||| ||
Sbjct 809939 AAGGTGCGGCCATCCTCAAGCTGTTTGCCGGCAAAGATAAGCCTTTGCTGGTCCGGAGGA 809880
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| ||| |||||||| ||||||| | ||| || | ||| ||||| ||||| ||
Sbjct 809879 ATTCCTTCCTTGTCCTGGATCTTT-GCTTTGACATTGTCAATGGTGTCCGAACTCTCAAC 809821
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || || || ||||| | ||||||||||| || |||||
Sbjct 809820 TTCGAGAGTGATGGTCTTGCCGGTGAGGGTTTTCACAAATATTTGCAT 809773
Score = 98.7 bits (108), Expect = 6e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | || | |||| |||||||| |||||||| ||||| || || | |
Sbjct 810227 CCACCTCTCAACCGGAGAACCAGGTGGAGAGTTGATTCCTTTTGGATGTTGTAGTCAGCA 810168
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || | | ||||| || || ||||| ||||| || | | ||||||||| || ||
Sbjct 810167 AGGGTCCTTCCATCTTCGAGCTGCTTACCAGCAAAGATGAGTCTCTGTTGGTCTGGAGGG 810108
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659
| ||| || |||||| |||||| |||| ||| ||||| ||| || ||
Sbjct 810107 ATTCCTTCTTTGTCTTGAATCTTTGCCTTTACATTGTCAATGGTGTCGGAGCTTTCAACC 810048
Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||| |||||||||||||| | || || || || ||||||||
Sbjct 810047 TCGAGGGTGATCGTTTTACCGGTAAGAGTCTTTACGAAGATCTGCAT 810001
>seq1
Length=11827220
Score = 104 bits (114), Expect = 1e-17
Identities = 156/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| || | ||||| || |||||| || ||||| || || | || || ||
Sbjct 5218429 AGACGCAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGA 5218488
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| || || || || |||||||| || | |||||| |||||||| || | || |||
Sbjct 5218489 CCGTCCTCCAGCTGCTTCCCGGCAAAGATCAGACGCTGCTGGTCCGGTGGGATCCCTTCC 5218548
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||||| | || ||| | ||| ||||| ||| ||||| |||| |||
Sbjct 5218549 TTGTCCTGGATCTTG-GCCTTCACGTTGTCAATGGTGTCCGAGCTTTCCACCTCCAGGGT 5218607
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || | || ||||| |||||||||||
Sbjct 5218608 GATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 5218646
Score = 96.9 bits (106), Expect = 2e-15
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||| |||||||||| |||||| || ||||| || || | || || ||
Sbjct 5218885 AGACGGAGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTACGG 5218944
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || | || ||||||||||| || || | ||| |||||||| || | || |||
Sbjct 5218945 CCATCCTCCAACTGCTTACCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATGCCTTCC 5219004
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| || | ||| ||| | || ||||| |||||| || |||| ||
Sbjct 5219005 TTGTCCTGGATC-TTGGCTTTCACGTTGTCGATGGTGTCAGAGCTCTCGACCTCCAAAGT 5219063
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
||||| || || || | || || || || || ||||||
Sbjct 5219064 GATCGTCTTGCCCGTAAGGGTCTTGACGAAGATTTGCATG 5219103
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| ||||| | ||||| || || || |||||| || ||||| || || |
Sbjct 5218648 CCACCTCGCAGACGGAGGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCCGCC 5218707
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || || || || ||||||||||| || | | ||| |||||||| ||
Sbjct 5218708 AGGGTGCGGCCATCCTCCAGCTGCTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGG 5218767
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || || | || ||||| |||||| ||
Sbjct 5218768 ATCCCCTCCTTGTCCTGGATC-TTAGCCTTGACATTGTCGATGGTGTCAGAGCTCTCGAC 5218826
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||| || || || ||||| | || |||||||| ||||||||
Sbjct 5218827 CTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTCACAAATATCTGCAT 5218874
Score = 82.4 bits (90), Expect = 5e-11
Identities = 151/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||| ||||| ||| |||||| || ||||| || || | | |||||
Sbjct 5219113 AGACGGAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTTCGG 5219172
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| ||||| || || || || || || | | ||| ||||| || || | ||||||
Sbjct 5219173 CCGTCCTCAAGCTGCTTTCCAGCGAAGATCAGCCTCTGCTGGTCAGGTGGGATGCCCTCC 5219232
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| ||| || | ||| ||| | || ||||| |||||| || |||| ||
Sbjct 5219233 TTGTC-CTGAATCTTAGCTTTCACGTTGTCGATGGTGTCGGAGCTCTCAACCTCCAAAGT 5219291
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| || || || | || || || || || |||||
Sbjct 5219292 GATCGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCAT 5219330
>seq10304
Length=4769457
Score = 91.5 bits (100), Expect = 9e-14
Identities = 146/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| || |||||| || ||||| || |||| || || || |||| || | |||
Sbjct 685595 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCTGCGAGGGTGCGGCCGTCCTCCAACTGT 685536
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| ||||| || || | ||||| ||||||||||| | || |||||||| |||| ||
Sbjct 685535 TTCCCGGCGAAAATCAGCCGCTGCTGGTCCGGCGGGATCCCTTCCTTGTCCTGGATC-TT 685477
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || || | || ||||| | ||| ||||| | |||||| || || || ||
Sbjct 685476 AGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCAAGGGTTATGGTCTTCCCCGT 685417
Query 34683 TAACGTTTTCACAAAAATCTGCATGTT 34709
|| |||||||| || |||||||| ||
Sbjct 685416 TAGTGTTTTCACGAAGATCTGCATCTT 685390
>seq5265
Length=2761455
Score = 89.7 bits (98), Expect = 3e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || || | |||||| | ||||||||| ||| || ||||| || || ||||
Sbjct 1298818 CCACCCCTGAGCCTCAACACTAGATGGAGAGTAGACTCTTTCTGAATATTGTAGTCTGCT 1298877
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| | ||||| ||||| ||||| |||||||| | | |||||| || || ||
Sbjct 1298878 AGGGTTCGTCCATCTTCTAGTTGCTTACCAGCAAATATCAGCCTCTGTTGATCAGGTGGT 1298937
Query 34600 ACTCCCTCCTTGTC 34613
| |||||||||||
Sbjct 1298938 ATGCCCTCCTTGTC 1298951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314682615690017
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |