Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tarenaya_20hassleriana_20[refseq_20GCF_5F000463585.1_202013-09-05]
12,249 sequences; 249,929,577 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq5186 127 2e-24
seq7521 114 1e-20
seq6695 113 4e-20
seq1 113 4e-20
seq10304 109 5e-19
seq8189 95.1 1e-14
seq5760 95.1 1e-14
>seq5186
Length=9353477
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || ||||| || ||||||||| | || ||||| || ||||| |||
Sbjct 4546909 ATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACGATCACTCTGGAGGTGGAGAGCTCC 4546968
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| |||| |||||| || || || ||||| ||||| || || || |||||
Sbjct 4546969 GACACGATCGAGAATGTCAAAACCAAGATCCAGGACAAGGAAGGGATTCCCCCGGATCAG 4547028
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | |||||| ||||| ||||||| | ||| | | ||||||||
Sbjct 4547029 CAGAGGCTGATCTTCGCCGGAAAACAGCTGGAAGATGGGAGGACACTGGCTGATTACAAT 4547088
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||||||||| | ||| |||| ||||| | || || || ||
Sbjct 4547089 ATCCAGAAGGAGTCGACGCTGCATCTGGTGCTGCGTCTCCGTGGAGGAAT 4547138
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || |||||| | || |||||||| || || |||
Sbjct 7866938 ATGCAGATCTTCGTTAAGACCCTCACAGGCAAGACAATCACTCTTGAGGTCGAGAGCTCC 7866879
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| |||||| || ||||| || || || || || || ||
Sbjct 7866878 GACACAATCGACAACGTCAAGGCAAAAATCCAGGACAAGGAGGGGATTCCCCCAGACCAG 7866819
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || || || ||| |||| ||| | ||| | | || ||||||
Sbjct 7866818 CAGAGGTTGATCTTTGCTGGTAAGCAACTGGAGGACGGCAGAACCCTCGCTGACTACAAC 7866759
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || ||||| ||| | ||||||||| | ||| | || ||||| ||
Sbjct 7866758 ATTCAGAAAGAGTCAACCCTCCATTTGGTTCTTCGTCTCCGTGGTGGTAT 7866709
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||||||| ||| | || || | || ||||| |||
Sbjct 7866026 ATGCAGATCTTTGTGAAGACCCTGACCGGTAAGACCATCACGTTGGAGGTGGAGAGCTCC 7865967
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| || || || ||||| || || || || || || ||
Sbjct 7865966 GACACCATCGACAACGTGAAAGCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAG 7865907
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||||| || || |||| || || || || | |||||||||
Sbjct 7865906 CAGAGGCTGATCTTTGCCGGTAAGCAGCTGGAGGATGGTCGTACTCTTGCGGATTACAAC 7865847
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || ||||| |||||| | || ||||| ||
Sbjct 7865846 ATCCAGAAGGAGTCGACCCTCCACTTGGTGTTGCGTCTACGTGGTGGGAT 7865797
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||||||| ||| |||| || || |||||||| ||
Sbjct 7865798 ATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACTATCACACTGGAAGTGGAGAGCTCG 7865739
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | || || || || || ||||| || || || || || || ||
Sbjct 7865738 GACACGATCGACAACGTGAAGGCGAAGATACAGGACAAGGAGGGAATCCCCCCGGACCAG 7865679
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | |||| ||| || || || |||| ||| | || || | || ||||||
Sbjct 7865678 CAGCGTCTGATATTCGCTGGAAAGCAGCTGGAGGACGGCCGTACACTTGCGGACTACAAC 7865619
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||||||| | || | || | ||| | || |||||
Sbjct 7865618 ATCCAGAAGGAGTCGACCCTTCACCTCGTCCTCCGTCTCCGTGGTGG 7865572
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||||||||| ||| | || ||| | || ||||| |||
Sbjct 7866482 ATGCAGATCTTCGTCAAGACTCTGACCGGGAAGACCATCACTTTGGAGGTGGAGAGCTCC 7866423
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || || |||||||| ||||| ||||| || ||
Sbjct 7866422 GACACCATTGACAACGTTAAGGCTAAGATCCAGGACAAAGAGGGCATCCCACCGGACCAG 7866363
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || || || | ||||| | |||| | | || ||||||
Sbjct 7866362 CAGAGGCTGATCTTTGCGGGTAAGCAGCTTGAAGATGGCCGGACCCTGGCTGACTACAAC 7866303
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| ||| | || | || | | ||||| ||||||||
Sbjct 7866302 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTCAGGTTGCGTGGTGGCAT 7866253
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || ||||| || | || || || || || ||| ||
Sbjct 4547137 ATGCAGATTTTCGTGAAGACCCTCACCGGAAAAACCATAACACTGGAGGTTGAAAGCTCG 4547196
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| |||| || || || ||||| ||||| || || || | ||||| |||
Sbjct 4547197 GACACGATCGAGAACGTGAAGTCGAAGATTCAGGACAAGGAGGGAATCTCGCCCGACCAA 4547256
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | |||| |||||| || || | ||||| | || | |||||||||||
Sbjct 4547257 CAGAGGCTGATATTCGCCGGAAAGCAGCTCGAAGATGGACGAACTCTGTCCGATTACAAT 4547316
Query 27168 ATTCAAAAGGAGTCGAC 27184
|| || || ||||||||
Sbjct 4547317 ATACAGAAAGAGTCGAC 4547333
>seq7521
Length=6323785
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||| || |||||| | || || || || |||||| |||
Sbjct 4430934 ATGCAGATCTTCGTGAAGACTCTTACTGGCAAGACGATCACCCTCGAGGTGGAAAGCTCC 4430875
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || ||||| ||||||||||| || |||||||| |||
Sbjct 4430874 GACACCATTGACAATGTGAAGGCCAAGATTCAGGACAAAGAAGGAATCCCACCCGACCAA 4430815
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | ||||| || || ||||||| | |||| || | |||||||||
Sbjct 4430814 CAAAGACTCATCTTTGCCGGGAAGCAGCTGGAAGATGGCAGGACCCTTGCTGATTACAAC 4430755
Query 27168 ATTCAAAAGGAGTCGACC 27185
|| || ||||| || |||
Sbjct 4430754 ATCCAGAAGGAATCCACC 4430737
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| ||||| || ||||| ||| | || || |||||||| || ||
Sbjct 4431162 ATGCAAATCTTTGTGAAAACACTCACCGGAAAGACCATCACCCTTGAAGTCGAGAGCTCG 4431103
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || |||||| || ||||| ||||| || || || || ||
Sbjct 4431102 GACACCATTGACAATGTTAAGGCAAAAATCCAGGACAAGGAAGGAATTCCTCCGGACCAG 4431043
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | ||||| ||||| | ||||| | ||| | |||| ||||||
Sbjct 4431042 CAAAGGCTTATCTTTGCCGGAAAACAGCTCGAAGATGGCCGCACCTTGGCCGACTACAAC 4430983
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| ||| | || ||||| | || ||| | ||||| ||
Sbjct 4430982 ATCCAAAAGGAGTCAACCCTCCACCTGGTTCTCCGGTTGAGAGGTGGTAT 4430933
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || ||| | || || | || ||||| ||
Sbjct 4430250 ATGCAGATCTTTGTGAAGACATTGACGGGGAAGACGATAACATTGGAGGTGGAGAGCTCA 4430191
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | || || || || |||||||| || || ||||| || || ||
Sbjct 4430190 GACACGATCGATAATGTGAAGGCGAAGATCCAAGACAAGGAGGGGATACCGCCGGACCAG 4430131
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || || || ||||||| || || | | |||||||||
Sbjct 4430130 CAGAGGCTCATCTTTGCAGGGAAGCAGCTGGAAGATGGTCGTACTTTGGCTGATTACAAC 4430071
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||||||| | ||| | ||| | ||| | || |||||
Sbjct 4430070 ATCCAGAAGGAGTCGACCCTTCATCTTGTTCTCCGTCTCCGTGGTGG 4430024
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || || || |||||| | || ||||| || || || ||
Sbjct 4430478 ATGCAGATCTTTGTGAAGACACTCACGGGCAAGACCATCACTCTGGAGGTAGAGAGCTCG 4430419
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| ||| ||||||||||| || || || || || || ||
Sbjct 4430418 GACACAATCGACAATGTGAAAGCAAAGATTCAAGACAAGGAGGGTATTCCCCCGGACCAG 4430359
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || || || |||| ||| | ||| | | ||||||||
Sbjct 4430358 CAGAGACTCATCTTTGCAGGGAAGCAGCTGGAGGACGGAAGAACCCTAGCGGATTACAAT 4430299
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || ||| | ||| | || | ||| | || ||||| ||
Sbjct 4430298 ATCCAGAAGGAATCAACCCTTCATCTCGTGCTCCGTCTCCGTGGTGGGAT 4430249
>seq6695
Length=6602074
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| |||||||| ||||| || ||||||||| | || ||||| ||||| || ||
Sbjct 804641 ATGCAAATATTTGTGAAAACCCTCACCGGCAAGACCATCACTCTCGAAGTTGAGAGTTCG 804700
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| ||| || || ||||| ||||| || || || || ||
Sbjct 804701 GACACCATTGACAATGTCAAAGCAAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCAG 804760
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | ||||||||||| | || || | ||| | |||| ||||||
Sbjct 804761 CAAAGGCTTATCTTTGCCGGCAAACAGCTTGAGGATGGCCGCACCTTGGCCGACTACAAC 804820
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| ||||| | || ||||| | || || | ||||| ||
Sbjct 804821 ATCCAAAAGGAATCGACTCTCCACCTGGTTCTCCGGTTAAGAGGTGGTAT 804870
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || ||||| ||||| ||||| || | || || || || || ||| |||
Sbjct 804869 ATGCAGATCTTCGTAAAGACTCTTACCGGTAAAACGATCACCCTCGAGGTTGAAAGCTCC 804928
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || ||| ||||||||||||||||| || || || || |||
Sbjct 804929 GACACCATTGACAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCTCCAGACCAA 804988
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || || || | ||||| | |||| || | || ||||||
Sbjct 804989 CAGAGACTCATCTTTGCTGGTAAGCAGCTCGAAGATGGAAGGACCCTTGCTGACTACAAC 805048
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| || || | || ||||| | || ||| | ||||| ||
Sbjct 805049 ATCCAAAAGGAATCAACTCTCCACCTGGTTCTCCGGTTGAGAGGTGGTAT 805098
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| |||||||| ||||| || ||||||||| | || ||||| ||||| || ||
Sbjct 809773 ATGCAAATATTTGTGAAAACCCTCACCGGCAAGACCATCACTCTCGAAGTTGAGAGTTCG 809832
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| ||| || || ||||| ||||| || || || || ||
Sbjct 809833 GACACCATTGACAATGTCAAAGCAAAGATCCAGGACAAGGAAGGAATTCCTCCGGACCAG 809892
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | ||||||||||| | || || | ||| | |||| ||||||
Sbjct 809893 CAAAGGCTTATCTTTGCCGGCAAACAGCTTGAGGATGGCCGCACCTTGGCCGACTACAAC 809952
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| ||||| | || ||||| | || || | ||||| ||
Sbjct 809953 ATCCAAAAGGAATCGACTCTCCACCTGGTTCTCCGGTTAAGAGGTGGTAT 810002
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || ||||| ||||| ||||| || | || || || || || ||| |||
Sbjct 810001 ATGCAGATCTTCGTAAAGACTCTTACCGGTAAAACGATCACCCTCGAGGTTGAAAGCTCC 810060
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || ||| ||||||||||||||||| || || || || |||
Sbjct 810061 GACACCATTGACAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCTCCAGACCAA 810120
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || || || | ||||| | |||| || | || ||||||
Sbjct 810121 CAGAGACTCATCTTTGCTGGTAAGCAGCTCGAAGATGGAAGGACCCTTGCTGACTACAAC 810180
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| || || | || ||||| | || ||| | ||||| ||
Sbjct 810181 ATCCAAAAGGAATCAACTCTCCACCTGGTTCTCCGGTTGAGAGGTGGTAT 810230
Score = 82.4 bits (90), Expect = 7e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| ||||| || || ||||| || || ||| | || ||||| || || || ||
Sbjct 810913 ATGCAAATATTCGTCAAGACTCTCACAGGAAAGACCATCACTCTAGAGGTTGAGAGCTCG 810972
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || ||| || || ||||| ||||| || || || || ||
Sbjct 810973 GATACCATTGACAATGTGAAGGCAAAGATACAGGACAAGGAAGGAATCCCTCCGGACCAG 811032
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || || || | || || || |||| | | |||||||||
Sbjct 811033 CAGAGACTCATCTTTGCTGGGAAGCAGCTCGAGGATGGTCGGACCCTGGCTGATTACAAC 811092
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || ||| | || ||||| | ||| | || ||||| ||
Sbjct 811093 ATCCAGAAGGAATCCACCCTCCACCTGGTTCTCCGTCTTCGTGGTGGAAT 811142
>seq1
Length=11827220
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || ||||| || ||| | || || || || |||||| ||
Sbjct 5218646 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACCCTGGAGGTGGAAAGCTCG 5218587
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || || ||||| ||||| || ||||| || ||
Sbjct 5218586 GACACCATTGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCGGACCAG 5218527
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||| || || |||| ||| || ||| | | || ||||||
Sbjct 5218526 CAGCGTCTGATCTTTGCCGGGAAGCAGCTGGAGGACGGTCGCACCCTGGCGGACTACAAC 5218467
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||||||| | || | || ||||| |||| |||||
Sbjct 5218466 ATCCAGAAGGAGTCGACCCTCCACCTTGTCCTGCGTCTGCGTGGTGG 5218420
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||| || ||||||||||||||| | || || || || || || ||
Sbjct 5218874 ATGCAGATATTTGTGAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTCGAGAGCTCT 5218815
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || || ||||| || || || ||||| || ||
Sbjct 5218814 GACACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAGGGGATCCCACCGGACCAG 5218755
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||||| || || |||| || | ||| | | || ||||||
Sbjct 5218754 CAGAGGCTGATCTTTGCCGGTAAGCAGCTGGAGGATGGCCGCACCCTGGCGGACTACAAC 5218695
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| ||| | || ||||| | ||| |||| ||||| ||
Sbjct 5218694 ATCCAGAAGGAGTCTACCCTTCACTTGGTCCTCCGTCTGCGAGGTGGAAT 5218645
>seq10304
Length=4769457
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | || || |||||||| || | |||
Sbjct 685393 ATGCAGATCTTCGTGAAAACACTAACGGGGAAGACCATAACCCTTGAAGTCGAGTCCTCC 685452
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || || ||||| ||||| || || || || ||
Sbjct 685453 GACACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGGATCCCGCCGGACCAG 685512
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | |||||| ||||| ||||| ||| | ||| | | || ||||||
Sbjct 685513 CAGCGGCTGATTTTCGCCGGGAAACAGTTGGAGGACGGCCGCACCCTCGCAGACTACAAC 685572
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || ||||||||||| | || | ||| | || | || ||||||
Sbjct 685573 ATCCAGAAGGAGTCGACGCTCCACCTCGTTCTCCGCCTCCGTGGTGGC 685620
>seq8189
Length=468
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | || || || || || ||| | ||
Sbjct 14 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTCGAATCCTCG 73
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || || || || ||||| ||||| || || || |||||
Sbjct 74 GATACCATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGGATCCCGCCGGATCAG 133
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | |||||| ||||| | |||||| | ||| | |||| ||||||
Sbjct 134 CAGCGCCTGATCTTCGCCGGGAAACAGCTTGAAGACGGCCGCACCCTCGCCGACTACAAC 193
Query 27168 ATTCAAAAGGAGTCGAC 27184
|| || |||||||||||
Sbjct 194 ATCCAGAAGGAGTCGAC 210
>seq5760
Length=2305957
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | || || || || || ||| | ||
Sbjct 1766226 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTCGAATCCTCG 1766285
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || || || || ||||| ||||| || || || |||||
Sbjct 1766286 GATACCATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGGATCCCGCCGGATCAG 1766345
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | |||||| ||||| | |||||| | ||| | |||| ||||||
Sbjct 1766346 CAGCGCCTGATCTTCGCCGGGAAACAGCTTGAAGACGGCCGCACCCTCGCCGACTACAAC 1766405
Query 27168 ATTCAAAAGGAGTCGAC 27184
|| || |||||||||||
Sbjct 1766406 ATCCAGAAGGAGTCGAC 1766422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434851808556480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |