Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tarenaya_20hassleriana_20[refseq_20GCF_5F000463585.1_202013-09-05] 12,249 sequences; 249,929,577 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq9362 89.7 6e-13 >seq9362 Length=5148269 Score = 89.7 bits (98), Expect = 6e-13 Identities = 142/202 (70%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 167439 GATGATCAATACATCCTTGACGCGGCTGAGGAAGCGGGTGTGGACATCAACTACTCGTGC 167498 || ||||| |||||||| |||||||| ||||| || || || || | |||||| ||| Sbjct 706909 GAGGATCAGTACATCCTGGACGCGGCCGAGGAGGCAGGGGTCGAGCTGCCCTACTCTTGC 706850 Query 167499 CGTGCAGGCGCTTGTTCGTCGTGCGCGGGAAAACTCATCTCTGGCACCGTAGATCAAAGC 167558 || || ||||||||||| | || || || || || |||||| | || || || | Sbjct 706849 CGGGCCGGCGCTTGTTCCACCTGTGCCGGGAAGATCGAGTCTGGCGCTGTCGACCAGTCC 706790 Query 167559 GATCAATCCTTCCTGGACGATGATCAAATTGCCGAAGGTTTCCTTCTCACCTGTGTGTCC 167618 || || || || ||||| |||| || | |||||| | | || ||||| || || Sbjct 706789 GACGGCTCGTTTCTCGACGACGATCTCATCGGAAAAGGTTACGTCCTTACCTGCGTTTCG 706730 Query 167619 TATCCAACCAG--CGACTGTGT 167638 ||||| ||| ||||||||| Sbjct 706729 TATCC--TCAGTCCGACTGTGT 706710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592107727022480