Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq5 134 1e-26 seq9 118 9e-22 seq6 118 9e-22 seq7 114 1e-20 seq1 107 2e-18 >seq5 Length=39371879 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| || | || | || | ||||| || ||||| ||||| || || ||||| | Sbjct 2688658 CCTCCACGGAGCCTGAGGACAAGGTGGAGAGTCGACTCCTTTTGGATATTATAATCAGCC 2688717 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| || ||||| |||||||| || ||| ||||||| ||||| || |||||||| Sbjct 2688718 AAAGTACGGCCGTCCTCCAGCTGTTTCCCGGCGAAGATGAGCCGCTGTTGGTCGGGAGGG 2688777 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||| || ||||| ||||| || || | |||| ||||| | |||||||| Sbjct 2688778 ATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTGTCGATCGTGTCGGAACTCTCGACT 2688837 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| ||| | ||||||||||||| |||||| ||||| || ||||| Sbjct 2688838 TCGAGGGTGATGGTTTTGCCGGTCAAAGTTTTGACAAAGATTTGCAT 2688884 Score = 132 bits (146), Expect = 4e-26 Identities = 156/210 (74%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || ||||| || || ||||||||||| || || || || ||| Sbjct 2689132 ACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGTACGGCCGTCTTCG 2689191 Query 118590 AGCTGTTTTCCA-GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||||| ||| ||| ||||||| | ||||| ||||| || || || ||||||||| Sbjct 2689192 AGCTGTTTGCCACGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTG 2689251 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || ||||| | |||| |||||| | ||||||||||||| || | || || Sbjct 2689252 GATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACCTCGAGAGTTATGGTCTT 2689311 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||||| ||||| || || |||||||| Sbjct 2689312 GCCGGTCAGGGTTTTCACGAAGATCTGCAT 2689341 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || ||||| || || ||||| ||||| || || || || ||| Sbjct 2688904 ACCAGGTGGAGAGTTGACTCCTTCTGGATGTTATAATCCGCCAAGGTACGACCGTCTTCG 2688963 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| || ||| ||||||| | ||||| ||||| || || || ||||||||| Sbjct 2688964 AGCTGTTTCCCGGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGG 2689023 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||||| | ||||| || |||| ||| | ||||| Sbjct 2689024 ATCTTGGCCTTGACGTTGTCGATCGTGTCGGAACTCTCCACTTCGAGGGTGATGGTTTTA 2689083 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||| ||||| || || |||||||| Sbjct 2689084 CCGGTCAAGGTTTTGACGAAGATCTGCAT 2689112 Score = 102 bits (112), Expect = 7e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGTATCCTCGAGCT 118593 ||||| ||||||||||| |||||||| ||||| ||| | ||| | | |||||| | | Sbjct 2688225 GTGGAGGGTAGACTCTTTCTGAATGTTATAATCAGCT-AAAGTCCTCCCATCCTCCAATT 2688283 Query 118594 GTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTT 118653 | || || || |||| || | |||||||| || || || || ||||| || ||| | Sbjct 2688284 GCTTCCCGGCAAAGATAAGCCTTTGCTGATCTGGGGGGATTCCTTCCTTATCCTGAATCT 2688343 Query 118654 TTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGG 118713 || || || | |||| || |||| || || ||||| | ||| | ||||| || | Sbjct 2688344 TTGCCTTGACATTATCGATTGTATCCGAACTTTCCACCTCCAAGGTGATTGTTTTTCCAG 2688403 Query 118714 TCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || || |||||||||||||| Sbjct 2688404 TCAAGGTCTTGACAAAAATCTGCAT 2688428 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| || | ||||| || | || | || || || ||||| ||||||||||| | Sbjct 2688430 CCTCCACGAAGCCTCAAAACAAGATGAAGGGTTGATTCCTTTTGTATGTTGTAATCAGCC 2688489 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || | | ||||| ||||| || |||||| |||| | || || || || || || Sbjct 2688490 AAGGTCCTCCCGTCCTCAAGCTGCTTCCCAGCGAAGATCAATCGTTGTTGGTCTGGTGGG 2688549 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || ||||| ||| || || ||||| | || | ||||||| |||||||||| Sbjct 2688550 ATCCCTTCCTTATCTTGGATCTTGGCCTTAACGTTATCAATCGTGTCCGAGCTCTCGACC 2688609 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || | ||| | || || || |||| ||||| ||||| || |||||| || Sbjct 2688610 TCCAGGGTTATAGTCTTTCCTGTCAAGGTTTTGACAAAGATTTGCATGCCT 2688660 >seq9 Length=38630433 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 |||||||| | || | ||| | ||| | || || || || || || ||||| || | Sbjct 27803490 CCTCCGCGCAGCCTGAGCACAAGGTGAAGGGTTGATTCCTTCTGGATATTGTAGTCCGCC 27803431 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| ||||||||||| || |||||| |||| | ||||| || || ||||| Sbjct 27803430 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCCGGAGGG 27803371 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||||||||||||| || || ||||| | |||| ||||| | ||| ||||| Sbjct 27803370 ATGCCCTCCTTGTCTTGGATCTTGGCCTTAACGTTGTCGATCGTGTCAGAGCTTTCGACT 27803311 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || | || | || |||||||| || ||||| || || ||||||||| Sbjct 27803310 TCAAGAGTGATGGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCATG 27803263 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || || || ||||| || |||||||| | || || || || Sbjct 27803244 ACCAGGTGGAGAGTCGATTCCTTTTGGATATTGTAATCCGCAAGGGTTCGGCCGTCTTCA 27803185 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || || ||| |||| | ||||| ||||| ||||| ||||| ||||||||| Sbjct 27803184 AGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCTTGG 27803125 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | |||||| ||||||| ||| | |||||| Sbjct 27803124 ATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCGAGGGTGATGGTTTTG 27803065 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || ||||| || || |||||||| Sbjct 27803064 CCGGTTAGGGTTTTCACGAAGATCTGCAT 27803036 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || || ||||||||||| | ||| ||| |||||| | || || ||| Sbjct 27803916 GTAGACTCCTTCTGGATGTTGTAATCTGCAAGAGTACGCCCATCCTCCAATTGCTTCCCA 27803857 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | ||||| | ||||||||| || || || |||||||| ||| |||||| || Sbjct 27803856 GCGAAAATGAGCCTCTGCTGATCAGGTGGAATCCCCTCCTTATCTTGAATTTTCGCCTTC 27803797 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| || || | ||||| ||||| | || | ||| || || ||||| || Sbjct 27803796 ACGTTATCGATTGTATCAGAACTCTCCACCTCAAGCGTAATCGTCTTTCCAGTCAGCGTC 27803737 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 27803736 TTCACGAAGATCTGCAT 27803720 Score = 93.3 bits (102), Expect = 4e-14 Identities = 164/235 (70%), Gaps = 8/235 (3%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| || | |||| ||| | ||| | || ||||| || || ||||||||||| | | Sbjct 27803718 CCTCCACGGAGCCTCAGCACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATC-CGC 27803660 Query 118572 ATAG----TGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGG 118627 | | ||| ||| |||| | ||| || || ||| | || | | ||||||||| || Sbjct 27803659 AAGGGTCCTGC-CGT--CCTCCAACTGCTTCCCGGCGAATATCAACCTCTGCTGATCCGG 27803603 Query 118628 AGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTC 118687 ||| || || ||||| || |||||| || || | || | || |||| ||||| Sbjct 27803602 AGGGATCCCTTCCTTATCCTGGATTTTTGCCTTGACGTTATCAATTGTATCCGAACTCTC 27803543 Query 118688 GACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||||| | || | ||||| ||||||| ||||| || |||||||||||| || Sbjct 27803542 TACCTCCAGAGTAATAGTTTTCCCGGTCAAGGTTTTAACGAAAATCTGCATGCCT 27803488 >seq6 Length=26303135 Score = 118 bits (130), Expect = 9e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA 118583 ||||| ||||| || | ||| |||||||| |||||||| ||||| || ||| || Sbjct 25054319 CTCAAAACCAAATGAAGTGTCGACTCTTTCTGAATGTTATAATCAGCCAAAGTTCGACCG 25054260 Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||||||||| || ||||| |||| || | ||||| || || || || || |||||| Sbjct 25054259 TCCTCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGCGGGATTCCTTCCTTG 25054200 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || || || || | |||| |||||| | ||| ||||| || | ||| | | Sbjct 25054199 TCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCGACTTCCAGGGTTATC 25054140 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| || || || || |||||||| Sbjct 25054139 GTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 25054105 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||| |||| ||| | || ||||| || ||||| |||||||| || ||| | ||| Sbjct 25054545 CAAGACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCCAGAGTCCTTCCATC 25054486 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || | || || ||||| | || | | |||||||| || || || || |||||||| Sbjct 25054485 TTCCAATTGCTTCCCAGCAAATATCAACCTTTGCTGATCTGGTGGAATCCCTTCCTTGTC 25054426 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 ||| ||| ||||| | || | ||| |||| |||||| ||||| | || | || Sbjct 25054425 CTGAATCTTTGCCTTAACATTATCAATGGTATCCGAGCTCTCCACCTCCAAAGTAATGGT 25054366 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || |||||||| || || ||||||||||| Sbjct 25054365 TTTCCCTGTCAGAGTCTTAACGAAAATCTGCAT 25054333 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||||||| || || || ||||||||||| Sbjct 25054080 GTGGAGAGTCGACTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCCGTCCTCGAGCTG 25054021 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || ||||| |||| || | || || || || || || || |||||||| || || Sbjct 25054020 CTTCCCAGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATCCCTTCCTTGTCCTGGATCTT 25053961 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||| | |||||||| |||| ||| | || |||||||| Sbjct 25053960 GGCCTTCACGTTGTCGATCGTGTCGGAACTCTCGACTTCGAGGGTGATTGTCTTGCCGGT 25053901 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || |||||||| Sbjct 25053900 GAGTGTCTTAACGAAGATCTGCAT 25053877 >seq7 Length=21614486 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || || | || ||||||||| |||| || ||||| || |||||||| || || Sbjct 2883244 CCACCACGGAGTCGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCA 2883303 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || | ||| || |||||||||||||| | || | | |||||| || || || Sbjct 2883304 AGGGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGG 2883363 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || ||||||||||| ||| || || || | |||| ||| |||| ||||| ||| Sbjct 2883364 ATACCCTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCACC 2883423 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || | || | ||||| || || |||||||| ||||| ||||||||| Sbjct 2883424 TCCAAAGTGATGGTTTTCCCAGTGAGAGTTTTCACAAATATCTGCATG 2883471 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || || ||||| || || |||||| |||||| | ||| || ||| Sbjct 2882590 GTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATCCTCCAACTGCTTGCCA 2882649 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| | | |||||| || ||||| || ||||||||||| ||| ||| ||| Sbjct 2882650 GCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTGAATCTTTGCTTTC 2882709 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| | |||||| ||||| | ||| | ||||| || |||| || Sbjct 2882710 ACATTGTCAATCGTGTCTGAGCTCTCAACCTCCAGGGTGATGGTTTTCCCAGTCAAGGTC 2882769 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 2882770 TTCACAAATATCTGCAT 2882786 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || || ||||| || || |||||| |||||| | ||| || ||| Sbjct 2895580 GTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATCCTCCAACTGCTTACCA 2895639 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| | | |||||| || ||||| || ||||||||||| ||| ||| ||| Sbjct 2895640 GCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTGAATCTTTGCTTTC 2895699 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| | |||||| ||||| | ||| | ||||| || |||| || Sbjct 2895700 ACATTGTCAATTGTGTCTGAGCTCTCAACCTCCAGGGTGATGGTTTTCCCAGTCAATGTC 2895759 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 2895760 TTGACAAATATCTGCAT 2895776 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||||||||| |||| || ||||| || |||||||| || || | || | ||| Sbjct 2896248 CAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCAAGGGTTCTGCCATC 2896307 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || ||||||||||| || | || | | |||||| || || || || ||||||||||| Sbjct 2896308 TTCAAGCTGTTTTCCGGCAAAAATTAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTC 2896367 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 ||| || || || | |||| ||| |||| ||||| ||||| | || | || Sbjct 2896368 CTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCACCTCCAAAGTGATGGT 2896427 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 ||| || || |||||||| ||||| ||||||||| Sbjct 2896428 TTTCCCAGTGAGAGTTTTCACAAATATCTGCATG 2896461 Score = 102 bits (112), Expect = 7e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||||||||| || ||||| ||||| || |||||||| | || | | ||| Sbjct 2896020 CAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATCTGCAAGCGTCCTCCCATC 2896079 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| | |||||| || || | || || | ||| ||||| ||||| || || |||||||| Sbjct 2896080 CTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAGGGATACCTTCCTTGTC 2896139 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || ||| || | || | ||| || | ||||| || || | ||| | || Sbjct 2896140 CTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTCTCAACTTCCAAGGTAATTGT 2896199 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || |||||||| |||||||| |||||| Sbjct 2896200 CTTTCCAGTGAGAGTTTTCACAAAAATTTGCATG 2896233 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||| ||||| || | || ||||| ||||| ||||| || || | || | | ||| Sbjct 2882802 CAAAACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCATC 2882861 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| |||||||| | || | | ||| || || || || || |||||||| || Sbjct 2882862 CTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTGGGATACCCTCCTTATC 2882921 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | || || |||||| | || | ||||| | |||||| ||||| | || | || Sbjct 2882922 TTGGATCTTGGCTTTAACGTTGTCAATTGTGTCAGAGCTCTCCACCTCCAAAGTGATGGT 2882981 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || |||| ||||| |||||||||||||| Sbjct 2882982 TTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 2883014 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||||||||| || ||||| ||||| || |||||||| | || | | ||| Sbjct 2883030 CAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATCTGCAAGCGTCCTCCCATC 2883089 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| | |||||| || || | || || | ||| ||||| ||||| || || |||||||| Sbjct 2883090 CTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAGGGATACCTTCCTTGTC 2883149 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || ||| || | || | ||| || | ||||| || || | ||| | || Sbjct 2883150 CTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTCTCAACTTCCAAGGTAATAGT 2883209 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || ||||| || |||||||| |||||| Sbjct 2883210 CTTTCCAGTGAGAGTCTTCACAAAAATTTGCATG 2883243 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||| ||||| || | || ||||| ||||| ||||| || || | || | | ||| Sbjct 2895792 CAAGACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCATC 2895851 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || ||||| |||||||| | || | | ||| || || || || || |||||||| || Sbjct 2895852 TTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTGGGATACCCTCCTTATC 2895911 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | || || ||| || | || | ||||| | |||||| ||||| | || | || Sbjct 2895912 TTGGATCTTGGCTTTGACATTGTCAATTGTGTCAGAGCTCTCCACCTCCAAAGTGATGGT 2895971 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || |||| ||||| |||||||||||||| Sbjct 2895972 TTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 2896004 >seq1 Length=37323695 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || ||||| | |||||||||||| | ||||| || ||||| || || || || Sbjct 11148464 CCACCACGTAAACGCAACACCAAGTGAAGGGTAGATTCCTTTTGGATATTATAGTCAGCG 11148405 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| | ||| || ||||| || ||||| ||||||| | ||||| || || || Sbjct 11148404 AGAGTTCTTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 11148345 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || |||||||| ||| || ||| || || | || | |||||| | ||||| ||| Sbjct 11148344 ATACCCTCCTTATCTTGGATCTTTGCCTTCACATTATCAATGGTGTCTGAACTCTCAACC 11148285 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | || || ||||| ||||| || |||||||| ||||| Sbjct 11148284 TCCAATGTGATAGTCTTTCCGGTAAGAGTCTTCACAAAAATTTGCAT 11148238 Score = 102 bits (112), Expect = 7e-17 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCT 118587 |||||||| | || ||||| ||||||||||| ||||| || |||| | | ||| | Sbjct 11148218 ACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAATCAG-CA-AGTGTCCTTCCATCTT 11148161 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | || ||||||||||| | || | | ||||||||| || || || ||||| || || Sbjct 11148160 CAAGTTGTTTTCCAGCAAAAATCAACCTCTGCTGATCTGGTGGGATACCCTCTTTATCCT 11148101 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 ||| || || || | || | ||||||| |||||| ||||| | || | ||||| Sbjct 11148100 GAATCTTAGCCTTGACATTGTCAATAGTGTCCGAGCTCTCTACCTCCAAAGTGATCGTTT 11148041 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 | || || ||||| || ||||| || |||||| Sbjct 11148040 TACCTGTGAGAGTCTTGACAAAGATTTGCATG 11148009 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || || || |||||||| || || ||| | | |||||| ||||| || ||| Sbjct 11148662 GTGGATTCCTTCTGGATGTTGTAGTCTGCCAGAGTTCTCCCATCCTCCAGCTGCTTCCCA 11148603 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || | | |||||| || ||||| || ||||||||||| || ||| || Sbjct 11148602 GCAAAAATCAACCTCTGCTGGTCTGGAGGGATCCCCTCCTTGTCCTGGATCTTTGCCTTC 11148543 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | |||||| | ||| || ||||| | || | || || || |||| || Sbjct 11148542 ACATTATCAATGGTGTCTGAGCTATCAACCTCCAACGTTATTGTCTTTCCAGTCAAGGTC 11148483 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 11148482 TTCACAAATATCTGCAT 11148466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433828121170252