Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 161 2e-34 seq7 152 1e-31 seq5 147 5e-30 seq6 136 9e-27 seq4 129 1e-24 seq9 116 9e-21 >seq1 Length=37323695 Score = 161 bits (178), Expect = 2e-34 Identities = 176/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | ||| || | ||| | || || || ||||| |||||||||||| Sbjct 11148011 ATGCCACCTCGAAGACGAAGCACCAAATGAAGGGTGGACTCCTTCTGGATATTATAGTCA 11147952 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||| || | ||||||||| || ||||| |||||||| || || || |||||||||||| Sbjct 11147951 GCTAGGGTGCGACCGTCTTCAAGCTGTTTGCCAGCAAAGATAAGTCTTTGTTGATCAGGA 11147892 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || |||||||| || || || ||||| ||||| ||||| || | ||||| || | || Sbjct 11147891 GGGATTCCTTCCTTGTCTTGGATCTTCGCTTTAACATTGTCAATAGTATC-AGAGCTCTC 11147833 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | || |||||||| || || ||||| || ||||| || ||||| Sbjct 11147832 AACCTCCAAGGTGATAGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 11147782 Score = 154 bits (170), Expect = 3e-32 Identities = 164/214 (77%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | || || || ||||| ||||||||||||| ||| |||| ||| || Sbjct 11147766 AAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTATAGTCAGCTAGGGTTCGACCATC 11147707 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || ||||| ||||||||||| ||||| || || |||||||| |||||||| || || Sbjct 11147706 TTCAAGCTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCAGGAGGGATTCCTTCCTTGTC 11147647 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 || ||||| || || ||||| || | ||||| || | || ||||| || || || | Sbjct 11147646 TTGGATCTTAGCCTTGACATTGTCAATAGTATC-AGAGCTCTCAACCTCAAGGGTGATGG 11147588 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| || || || ||||| ||||| || ||||| Sbjct 11147587 TCTTGCCTGTTAGGGTTTTCACAAAGATTTGCAT 11147554 Score = 143 bits (158), Expect = 6e-29 Identities = 152/198 (77%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| ||||| |||| || || || || ||||| |||||||||||| Sbjct 11148206 GTTGACTCCTTTTGAATGTTATAATCAGCAAGTGTCCTTCCATCTTCAAGTTGTTTTCCA 11148147 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | |||||| ||||| || || || || ||||||||||||||||| || || Sbjct 11148146 GCAAAAATCAACCTCTGCTGATCTGGTGGGATACCCTCTTTATCCTGAATCTTAGCCTTG 11148087 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | || | |||||||| | || || || ||||| || || || Sbjct 11148086 ACATTGTCAATAGTGTC-CGAGCTCTCTACCTCCAAAGTGATCGTTTTACCTGTGAGAGT 11148028 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 11148027 CTTGACAAAGATTTGCAT 11148010 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| || || ||||||||||||| |||||||| || ||||| || || || ||| Sbjct 11148434 GTAGATTCCTTTTGGATATTATAGTCAGCGAGAGTTCTTCCATCTTCAAGCTGCTTGCCA 11148375 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || ||||| || || || || || || || || ||||| || |||||||| || Sbjct 11148374 GCAAAGATGAGCCTTTGCTGGTCTGGTGGGATACCCTCCTTATCTTGGATCTTTGCCTTC 11148315 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || | || ||||| | ||| |||||||| || ||||| || Sbjct 11148314 ACATTATCAATGGTGTCTGAACTCTCAACCTCCAATGTGATAGTCTTTCCGGTAAGAGTC 11148255 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 11148254 TTCACAAAAATTTGCAT 11148238 Score = 143 bits (158), Expect = 6e-29 Identities = 162/216 (75%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| || || ||||| ||||| || || ||||| | |||||||| || || Sbjct 11148678 AAGAACAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGAGTTCTCCCATC 11148619 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || ||||||||||| | |||||| || || ||||| || || || || || Sbjct 11148618 CTCCAGCTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGGATCCCCTCCTTGTC 11148559 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAAT 104523 ||| |||||||| || ||||| || | ||| || |||| || ||||| | || || Sbjct 11148558 CTGGATCTTTGCCTTCACATTATCAATGGTGTCTGAGCTA---TCAACCTCCAACGTTAT 11148502 Query 104524 AGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| ||||| | || || |||||||||||||| Sbjct 11148501 TGTCTTTCCAGTCAAGGTCTTCACAAATATCTGCAT 11148466 Score = 132 bits (146), Expect = 1e-25 Identities = 153/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||||||||| ||||| | || || | |||||||| || || || || Sbjct 32435718 GTGGATTCCTTCTGAATATTGTAGTCGGCTAAGGTGCGGCCGTCTTCGAGCTGCTTGCCG 32435777 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | || ||||| || || |||||||| || ||||| ||||| ||||| Sbjct 32435778 GCGAAGATGAGACGTTGCTGATCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCTTTG 32435837 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || | ||| |||||||| || || ||||| || || || ||| Sbjct 32435838 ACATTGTCGATGGTGTCAGAGGATTCGACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTT 32435897 Query 104543 TTTACAAATATCTGCAT-TTTGTGT 104566 || || || |||||||| |||| || Sbjct 32435898 TTGACGAAGATCTGCATCTTTGCGT 32435922 Score = 113 bits (124), Expect = 1e-19 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || ||||| | || || || | ||| || || || || || ||||| |||| Sbjct 8434241 TTCCTCCCCTAAGCCTCAAAACAAGGTGAAGTGTGGACTCCTTTTGGATGTTATAATCAG 8434182 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 || |||| || ||||| ||||| || ||||||||||| | |||||| |||||||||| Sbjct 8434181 CAAGCGTTCGGCCATCTTCCAGTTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGAG 8434122 Query 104451 GTATTCCTTCTTTATCCTGAAT 104472 | || |||||||||||||| || Sbjct 8434121 GGATGCCTTCTTTATCCTGGAT 8434100 >seq7 Length=21614486 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| |||||||| | || ||||| || ||||| || ||||||||| Sbjct 2883274 GTTGACTCCTTCTGAATGTTATAGTCTGCAAGGGTTCTGCCATCTTCAAGCTGTTTTCCA 2883333 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||||| |||||| || || || || || || || || ||||||||||| || || Sbjct 2883334 GCAAAAATTAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGAATCTTGGCCTTC 2883393 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| | || ||||| | || || || || ||||| || ||| Sbjct 2883394 ACATTATCGATGGTATCCGAACTCTCCACCTCCAAAGTGATGGTTTTCCCAGTGAGAGTT 2883453 Query 104543 TTTACAAATATCTGCAT 104559 || |||||||||||||| Sbjct 2883454 TTCACAAATATCTGCAT 2883470 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| |||||||| | || ||||| || ||||| || |||||||| Sbjct 2896264 GTTGACTCCTTCTGAATGTTATAGTCTGCAAGGGTTCTGCCATCTTCAAGCTGTTTTCCG 2896323 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||||| |||||| || || || || || || || || ||||||||||| || || Sbjct 2896324 GCAAAAATTAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGAATCTTGGCCTTC 2896383 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| | || ||||| | || || || || ||||| || ||| Sbjct 2896384 ACATTATCGATGGTATCCGAACTCTCCACCTCCAAAGTGATGGTTTTCCCAGTGAGAGTT 2896443 Query 104543 TTTACAAATATCTGCAT 104559 || |||||||||||||| Sbjct 2896444 TTCACAAATATCTGCAT 2896460 Score = 147 bits (162), Expect = 5e-30 Identities = 173/233 (74%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | ||| || || || | || || || ||||| ||||| || ||| Sbjct 2883469 ATGCCACCCCTAAGTCGAAGAACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCA 2883528 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || ||||| ||||| |||||||| || ||||||||||| || || Sbjct 2883529 GCAAGGGTGCGGCCATCCTCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGT 2883588 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506 || || ||||| || || |||||||| ||||| ||||| || | || || ||| | Sbjct 2883589 GGGATCCCTTCCTTGTCTTGAATCTTAGCTTTGACATTATCAATAGTGTCAGAGCT---T 2883645 Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || || ||||| |||||||| ||||| ||||| |||||||| Sbjct 2883646 TCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 2883698 Score = 141 bits (156), Expect = 2e-28 Identities = 172/233 (74%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | ||| || || || | || || || ||||| ||||| || ||| Sbjct 2896459 ATGCCACCCCTAAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCA 2896518 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || ||||| ||||| |||||||| || ||||||||||| || || Sbjct 2896519 GCAAGGGTGCGGCCATCCTCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGT 2896578 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506 || || ||||| || || || ||||| ||||| ||||| || | || || ||| | Sbjct 2896579 GGGATCCCTTCCTTGTCTTGGATCTTGGCTTTGACATTATCAATAGTGTCAGAGCT---T 2896635 Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || || ||||| |||||||| ||||| ||||| |||||||| Sbjct 2896636 TCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 2896688 Score = 136 bits (150), Expect = 9e-27 Identities = 160/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | || || || ||||| ||||| ||||||| ||||| | ||| || Sbjct 2895564 AAGGACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATC 2895623 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || | || || |||||||| || | |||||| || || ||||| || || || || || Sbjct 2895624 CTCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTC 2895683 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||||||||||||||| ||||| || | || || || | || ||||| || || || | Sbjct 2895684 CTGAATCTTTGCTTTCACATTGTCAATTGTGTC-TGAGCTCTCAACCTCCAGGGTGATGG 2895742 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || ||||| | ||| || |||||||||||||| Sbjct 2895743 TTTTCCCAGTCAATGTCTTGACAAATATCTGCAT 2895776 Score = 131 bits (144), Expect = 4e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | || || || ||||| ||||| ||||||| ||||| | ||| || Sbjct 2882574 AAGGACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATC 2882633 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || | || || |||||||| || | |||||| || || ||||| || || || || || Sbjct 2882634 CTCCAACTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTC 2882693 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||||||||||||||| ||||| || | || || || | || ||||| || || || | Sbjct 2882694 CTGAATCTTTGCTTTCACATTGTCAATCGTGTC-TGAGCTCTCAACCTCCAGGGTGATGG 2882752 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || ||||| | || || |||||||||||||| Sbjct 2882753 TTTTCCCAGTCAAGGTCTTCACAAATATCTGCAT 2882786 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || || ||||| || || | || || || || || || | ||||| || Sbjct 2883046 GTTGACTCCTTTTGGATATTGTAATCTGCAAGCGTCCTCCCATCCTCCAACTGTTTGCCG 2883105 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||||||||| ||||| || ||||| || ||||| ||||| |||||| Sbjct 2883106 GCAAATATCAGCCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATCTTAGCTTTT 2883165 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| | || || || | ||||||||||| ||||| || || Sbjct 2883166 ACATTGTCAATGGTATCAGAACTCTCAACTTCCAAGGTAATAGTCTTTCCAGTGAGAGTC 2883225 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 2883226 TTCACAAAAATTTGCAT 2883242 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || || ||||| || || | || || || || || || | ||||| || Sbjct 2896036 GTTGACTCCTTTTGGATATTGTAATCTGCAAGCGTCCTCCCATCCTCCAACTGTTTGCCG 2896095 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||||||||| ||||| || ||||| || ||||| ||||| |||||| Sbjct 2896096 GCAAATATCAGCCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATCTTAGCTTTT 2896155 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| | || || || | ||||| ||||| ||||| || ||| Sbjct 2896156 ACATTGTCAATGGTATCAGAACTCTCAACTTCCAAGGTAATTGTCTTTCCAGTGAGAGTT 2896215 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 2896216 TTCACAAAAATTTGCAT 2896232 Score = 127 bits (140), Expect = 5e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | | || | ||| | || || || || || || |||||||| Sbjct 2895775 ATCCCTCCTCTAAGGCGCAAGACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCT 2895834 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || || || ||||| || || |||||||||||||| | ||||||||| ||||| Sbjct 2895835 GCAAGTGTCCTCCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGT 2895894 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || || || ||||| || ||||| ||||| ||||| || | || || || | || Sbjct 2895895 GGGATACCCTCCTTATCTTGGATCTTGGCTTTGACATTGTCAATTGTGTC-AGAGCTCTC 2895953 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 ||||| | || || || |||||||| | ||||| ||||| ||||||||| Sbjct 2895954 CACCTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCATT 2896005 Score = 118 bits (130), Expect = 2e-21 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | | || | ||| | || || || || || || |||||||| Sbjct 2882785 ATCCCTCCTCTCAGGCGCAAAACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCT 2882844 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || || || || || || || |||||||||||||| | ||||||||| ||||| Sbjct 2882845 GCAAGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGT 2882904 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || || || ||||| || ||||| ||||| || || || | || || || | || Sbjct 2882905 GGGATACCCTCCTTATCTTGGATCTTGGCTTTAACGTTGTCAATTGTGTC-AGAGCTCTC 2882963 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 ||||| | || || || |||||||| | ||||| ||||| ||||||||| Sbjct 2882964 CACCTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCATT 2883015 Score = 98.7 bits (108), Expect = 2e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || || ||||| | || | || | || || || || || || ||||| || Sbjct 12548024 ATTCCTCCCCTAAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCT 12547965 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||||| ||| ||||| || ||||| ||||||||||| | ||||| ||||||||| Sbjct 12547964 GCAAGAGTTCAACCATCTTCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGA 12547905 Query 104450 GGTATTCCTTCTTTATCCT 104468 || |||||||| || |||| Sbjct 12547904 GGGATTCCTTCCTTGTCCT 12547886 Score = 96.9 bits (106), Expect = 8e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || ||||| | || | || | || || || || || || ||||| || | Sbjct 12529397 TTCCTCCCCTAAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCTG 12529338 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 ||||||| ||| ||||| || ||||| ||||||||||| | ||||| |||||||||| Sbjct 12529337 CAAGAGTTCGACCATCTTCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAG 12529278 Query 104451 GTATTCCTTCTTTATCCT 104468 | |||||||| || |||| Sbjct 12529277 GGATTCCTTCCTTGTCCT 12529260 Score = 96.9 bits (106), Expect = 8e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || ||||| | || | || | || || || || || || ||||| || | Sbjct 12607095 TTCCTCCCCTAAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCTG 12607036 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 ||||||| ||| || || || ||||| ||||||||||| | ||||| |||||||||| Sbjct 12607035 CAAGAGTTCGACCATCCTCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAG 12606976 Query 104451 GTATTCCTTCTTTATCCT 104468 | |||||||| ||||||| Sbjct 12606975 GGATTCCTTCCTTATCCT 12606958 >seq5 Length=39371879 Score = 147 bits (162), Expect = 5e-30 Identities = 161/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | ||||| ||||||||||| ||||| |||| || ||| || || || Sbjct 2688216 AAGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTATAATCAGCTAAAGTCCTCCCATC 2688275 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || | ||| || || ||||| || ||||| || ||||| || || |||||||| ||||| Sbjct 2688276 CTCCAATTGCTTCCCGGCAAAGATAAGCCTTTGCTGATCTGGGGGGATTCCTTCCTTATC 2688335 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||||||||| || ||||| || | ||||| | ||| ||||| | || || || Sbjct 2688336 CTGAATCTTTGCCTTGACATTATCGATTGTATCCGAACTTTCCACCTCCAAGGTGATTGT 2688395 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || ||||| | || || ||||| ||||||||| Sbjct 2688396 TTTTCCAGTCAAGGTCTTGACAAAAATCTGCATT 2688429 >seq6 Length=26303135 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| | || | ||| | ||| || ||||||||||| ||||| |||| | ||||| | Sbjct 25054322 AGCCTCAAAACCAAATGAAGTGTCGACTCTTTCTGAATGTTATAATCAGCCAAAGTTCGA 25054263 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || || || |||||||| || ||||| || || || || || |||||||| Sbjct 25054262 CCGTCCTCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGCGGGATTCCTTCC 25054203 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || ||||| ||||| || || || || || | ||| ||| ||| || || || || Sbjct 25054202 TTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCGACTTCCAGGGTT 25054143 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||||||| || || || || || || |||||||| Sbjct 25054142 ATCGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 25054105 Score = 134 bits (148), Expect = 3e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||||||||| || |||| ||||| || || ||||| | ||| || ||| Sbjct 25054529 GTGGACTCCTTCTGAATATTGTAATCAGCCAGAGTCCTTCCATCTTCCAATTGCTTCCCA 25054470 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | ||| || ||||| || || || ||||| || |||||||||||||| || Sbjct 25054469 GCAAATATCAACCTTTGCTGATCTGGTGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTA 25054410 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | |||||| | || | || ||||| | ||||| || || || || || || Sbjct 25054409 ACATTATCAATGGTATC-CGAGCTCTCCACCTCCAAAGTAATGGTTTTCCCTGTCAGAGT 25054351 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 25054350 CTTAACGAAAATCTGCAT 25054333 >seq4 Length=31929104 Score = 129 bits (142), Expect = 1e-24 Identities = 233/341 (68%), Gaps = 0/341 (0%) Strand=Plus/Plus Query 268946 TTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATA 269005 || || || ||||| || || || |||||||| || || |||||||| ||||| | | Sbjct 2301714 TTCTATGGCTTCCAAATCGCCATCGAAAATATCCACTCCGAGATGTATAGTCTCCTCCTT 2301773 Query 269006 GATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTATGAGAACTATG 269065 || ||||| || | || |||||||||||| | || || | | ||| || Sbjct 2301774 GAAACTTACATCAAGGACTCCAACGAAAAGAACCGGCTCTTCCACGCCGTCGAAACAGTG 2301833 Query 269066 GACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGATAGCGCGCCTTAC 269125 |||||| || ||| | || ||||| |||||||||| ||| | | ||| | Sbjct 2301834 CCGTGTGTGGCTAAGAAAGCCGAGTGGGCGTTGAAATGGATCGACGGTTCGGAAACTTTC 2301893 Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185 | ||| || || | |||||||| || ||||| || ||||| || || ||| | Sbjct 2301894 GCCGAACGGCTAATCGCTTTTGCTTGCGTGGAAGGGATTTTCTTCTCTGGAAGTTTCTGC 2301953 Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTG 269245 ||||| |||||||| || || | || | ||||| |||||||||||||| ||||| || Sbjct 2301954 GCTATATTTTGGTTAAAAAAGCGCGGGTTAATGCCTGGATTAACTTTCTCGAACGAGTTA 2302013 Query 269246 ATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTT 269286 || | || |||||| | || ||||| |||||||| || Sbjct 2302014 ATCTCACGAGATGAAGGTCTCCATTGCGATTTCGCTTGCTT 2302054 >seq9 Length=38630433 Score = 116 bits (128), Expect = 9e-21 Identities = 158/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 ||||| || || | || ||||| || || ||||| || || | || |||| |||||| Sbjct 27803247 AGTACCAGGTGGAGAGTCGATTCCTTTTGGATATTGTAATCCGCAAGGGTTCGGCCGTCT 27803188 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || ||||| || || || || || | | ||||||||||||||| || ||||| || || Sbjct 27803187 TCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCT 27803128 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGT 104526 || ||||| || || || || || | ||| || || | || ||||| || || || || Sbjct 27803127 TGGATCTTGGCCTTGACGTTGTCGATGGTGTC-TGAGCTCTCCACCTCGAGGGTGATGGT 27803069 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGT 104564 || || || || ||||| || || |||||||| |||| Sbjct 27803068 TTTGCCGGTTAGGGTTTTCACGAAGATCTGCATCTTGT 27803031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151392041762148