Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq7 131 2e-25 seq1 122 8e-23 seq5 120 3e-22 seq9 114 1e-20 seq6 95.1 1e-14 seq2 93.3 4e-14 >seq7 Length=21614486 Score = 131 bits (144), Expect = 2e-25 Identities = 174/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || || | | |||||||||||| || | || || ||||| || | Sbjct 2883231 AAAAATTTGCATGCCACCACGGAGTCGCAACACCAAATGGAGGGTTGACTCCTTCTGAAT 2883290 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 |||||| || | || || ||| || ||||||||||| |||| ||||| || || Sbjct 2883291 GTTATAGTCTGCAAGGGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATTAACCTCTG 2883350 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||| ||||| || ||||| || ||||| | ||| || ||||| || ||| || || Sbjct 2883351 CTGGTCTGGTGGGATACCCTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTATC 2883410 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | ||||||||||| ||||| |||||||||||||| |||||||| Sbjct 2883411 CGAACTCTCCACCTCCAAAGTGATGGTTTTCCCAGTGAGAGTTTTCACAAATATCTGCAT 2883470 Query 95008 GC 95009 || Sbjct 2883471 GC 2883472 Score = 125 bits (138), Expect = 6e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||||||||| || | || || ||||| || | |||||| || | || || | Sbjct 2896246 CGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCAAGGGTTCTGCCA 2896305 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || |||||||||||| |||| ||||| || ||||| || || || ||||| || ||| Sbjct 2896306 TCTTCAAGCTGTTTTCCGGCAAAAATTAACCTCTGCTGGTCCGGTGGGATACCCTCCTTG 2896365 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || ||||| || ||| || || | || || || | |||||| Sbjct 2896366 TCCTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCACCTCCAAAGTGATG 2896425 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||| ||||| |||||||||||||| |||||||||| Sbjct 2896426 GTTTTCCCAGTGAGAGTTTTCACAAATATCTGCATGC 2896462 Score = 120 bits (132), Expect = 3e-22 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 |||||||||| ||||| ||||| |||| || || |||||||| | |||||| || | Sbjct 2882788 CCTCCTCTCAGGCGCAAAACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTG-C 2882846 Query 94841 ATAGTGT--TGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | ||||| | |||||| ||||| ||||| |||| || || || || || || || | Sbjct 2882847 A-AGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTG 2882905 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | ||||| || || || | || || || || ||| | | | ||||||| | || | Sbjct 2882906 GGATACCCTCCTTATCTTGGATCTTGGCTTTAACGTTGTCAATTGTGTCAGAGCTCTCCA 2882965 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | ||||||||||| ||||| | ||||||||||| |||||||| Sbjct 2882966 CCTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 2883014 Score = 113 bits (124), Expect = 4e-20 Identities = 170/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || ||| || | || |||| ||||||||| | || || |||||||| | Sbjct 2895993 AAAAATCTGCATTCCACCACGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGAT 2896052 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 || ||||| | || | |||||||| |||||| ||| |||| || | || || Sbjct 2896053 ATTGTAATCTGCAAGCGTCCTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTG 2896112 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||||||||||| |||||||| ||||| | || || || || || | | | || || Sbjct 2896113 TTGATCTGGAGGGATACCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATC 2896172 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || | || || || |||||||| |||||||||||||| || ||||| Sbjct 2896173 AGAACTCTCAACTTCCAAGGTAATTGTCTTTCCAGTGAGAGTTTTCACAAAAATTTGCAT 2896232 Query 95008 GC 95009 || Sbjct 2896233 GC 2896234 Score = 111 bits (122), Expect = 1e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| |||||||| || ||||||| | || || || ||||| || || ||||| || Sbjct 2883543 ATCCTCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTT 2883602 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||| || || ||||| | | |||||||| | || || || | ||||| Sbjct 2883603 GTCTTGAATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCCACCTCGAGGGTGAT 2883662 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || |||||||| |||||||||||||||||||| Sbjct 2883663 GGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 2883698 Score = 111 bits (122), Expect = 1e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 |||||||| | ||||| ||||| |||| || || |||||||| | |||||| || | Sbjct 2895778 CCTCCTCTAAGGCGCAAGACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTG-C 2895836 Query 94841 ATAGTGT--TGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | ||||| | ||| || ||||| ||||| |||| || || || || || || || | Sbjct 2895837 A-AGTGTCCTCCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTG 2895895 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | ||||| || || || | || || || ||||| | | | ||||||| | || | Sbjct 2895896 GGATACCCTCCTTATCTTGGATCTTGGCTTTGACATTGTCAATTGTGTCAGAGCTCTCCA 2895955 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | ||||||||||| ||||| | ||||||||||| |||||||| Sbjct 2895956 CCTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 2896004 Score = 107 bits (118), Expect = 2e-18 Identities = 169/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || ||| || | || |||| ||||||||| | || || |||||||| | Sbjct 2883003 AAAAATCTGCATTCCACCACGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGAT 2883062 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 || ||||| | || | |||||||| |||||| ||| |||| || | || || Sbjct 2883063 ATTGTAATCTGCAAGCGTCCTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTG 2883122 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||||||||||| |||||||| ||||| | || || || || || | | | || || Sbjct 2883123 TTGATCTGGAGGGATACCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATC 2883182 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || | || || || |||||||| ||||| |||||||| || ||||| Sbjct 2883183 AGAACTCTCAACTTCCAAGGTAATAGTCTTTCCAGTGAGAGTCTTCACAAAAATTTGCAT 2883242 Query 95008 GC 95009 || Sbjct 2883243 GC 2883244 Score = 105 bits (116), Expect = 6e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| |||||||| || ||||||| | || || || ||||| || || ||||| || Sbjct 2896533 ATCCTCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTT 2896592 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || || ||||| | | |||||||| | || || || | ||||| Sbjct 2896593 GTCTTGGATCTTGGCTTTGACATTATCAATAGTGTCAGAGCTTTCCACCTCGAGGGTGAT 2896652 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || |||||||| |||||||||||||||||||| Sbjct 2896653 GGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 2896688 Score = 102 bits (112), Expect = 7e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||| ||| || || ||||||| || || ||||| ||||||||||| || || || Sbjct 2882631 ATCCTCCAACTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTT 2882690 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||| ||||| || || | | | ||||| | | || || || | ||||| Sbjct 2882691 GTCCTGAATCTTTGCTTTCACATTGTCAATCGTGTCTGAGCTCTCAACCTCCAGGGTGAT 2882750 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||| ||||| | || |||||||| |||||||| Sbjct 2882751 GGTTTTCCCAGTCAAGGTCTTCACAAATATCTGCAT 2882786 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||| ||| || || ||||||| || || ||||| ||||||||||| || || || Sbjct 2895621 ATCCTCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTT 2895680 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | ||| ||||| || || | | | ||||| | | || || || | ||||| Sbjct 2895681 GTCCTGAATCTTTGCTTTCACATTGTCAATTGTGTCTGAGCTCTCAACCTCCAGGGTGAT 2895740 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||| ||||| | || || ||||| |||||||| Sbjct 2895741 GGTTTTCCCAGTCAATGTCTTGACAAATATCTGCAT 2895776 >seq1 Length=37323695 Score = 122 bits (134), Expect = 8e-23 Identities = 157/213 (74%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGT--TGGAATCCT 94856 |||||||| | || || |||||||| | ||||||||| || ||||| | ||| | Sbjct 11148218 ACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAATCAG-CA-AGTGTCCTTCCATCTT 11148161 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || |||||||| |||| || || || ||||||||||| || ||||| ||||| || | Sbjct 11148160 CAAGTTGTTTTCCAGCAAAAATCAACCTCTGCTGATCTGGTGGGATACCCTCTTTATCCT 11148101 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||| || |||||||| | | | |||||| | | || || || | ||||| |||| Sbjct 11148100 GAATCTTAGCCTTGACATTGTCAATAGTGTCCGAGCTCTCTACCTCCAAAGTGATCGTTT 11148041 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 | || || ||||| || |||||||| ||||||| Sbjct 11148040 TACCTGTGAGAGTCTTGACAAAGATTTGCATGC 11148008 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGA--ATC 94854 |||||| || | || || ||||| || | ||||| || ||| || ||| || ||| Sbjct 11147763 CACCAAATGGAGGGTGGACTCCTTCTGGATATTATAGTCAGCT---AGGGTTCGACCATC 11147707 Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914 || |||||||| || |||| || | |||||||| || ||||| || ||||| ||||| Sbjct 11147706 TTCAAGCTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCAGGAGGGATTCCTTCCTTGTC 11147647 Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974 | || || |||||||| | | | ||| |||| | || || |||| |||||||| Sbjct 11147646 TTGGATCTTAGCCTTGACATTGTCAATAGTATCAGAGCTCTCAACCTCAAGGGTGATGGT 11147587 Query 94975 TTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || |||||||||||||| ||||| Sbjct 11147586 CTTGCCTGTTAGGGTTTTCACAAAGATTTGCAT 11147554 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 94790 AATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTG 94849 || |||||||||||||| | |||||||||||||| | ||||| || | ||| | Sbjct 11148455 AAACGCAACACCAAGTGAAGGGTAGATTCCTTTTGGATATTATAGTCAGCGAGAGTTCTT 11148396 Query 94850 GAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909 ||| || ||||| || || ||||||| | |||||||| ||||| || ||||| || Sbjct 11148395 CCATCTTCAAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATACCCTCC 11148336 Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTG 94969 || || | || |||||||| || | | ||||| | || || || | ||| Sbjct 11148335 TTATCTTGGATCTTTGCCTTCACATTATCAATGGTGTCTGAACTCTCAACCTCCAATGTG 11148276 Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| |||||||| |||||||| || ||||| Sbjct 11148275 ATAGTCTTTCCGGTAAGAGTCTTCACAAAAATTTGCAT 11148238 Score = 102 bits (112), Expect = 7e-17 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 |||| ||||| || |||||||| || | ||| || || || ||| | |||||||| Sbjct 11148673 CAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGAGTTCTCCCATCCTCCA 11148614 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 |||| || || |||| || || || ||||| |||||||| || || || ||||| | | Sbjct 11148613 GCTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGGATCCCCTCCTTGTCCTGGA 11148554 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979 | |||||||| || | | ||||| | | || || || | ||| || || |||| Sbjct 11148553 TCTTTGCCTTCACATTATCAATGGTGTCTGAGCTATCAACCTCCAACGTTATTGTCTTTC 11148494 Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| | || |||||||| |||||||| Sbjct 11148493 CAGTCAAGGTCTTCACAAATATCTGCAT 11148466 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || ||||| || ||| | ||||| | | ||||||||| || || || ||||| ||| Sbjct 32435760 TCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGATCCGGTGGGATTCCTTCCTTG 32435819 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || || ||||| | ||| ||||||| | ||||| || | || ||| Sbjct 32435820 TCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGGATTCGACCTCTAGGGTTATG 32435879 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || ||||| || ||||||||||| Sbjct 32435880 GTCTTCCCCGTTAGGGTTTTGACGAAGATCTGCAT 32435914 >seq5 Length=39371879 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | ||| || |||||||| | |||||||| || ||| | ||||||||||| Sbjct 2688681 GTGGAGAGTCGACTCCTTTTGGATATTATAATCAGCCAAAGTACGGCCGTCCTCCAGCTG 2688740 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 ||| ||| | ||||| | | || || || ||||| || ||||||||||| | ||||| Sbjct 2688741 TTTCCCGGCGAAGATGAGCCGCTGTTGGTCGGGAGGGATGCCTTCTTTGTCCTGGATTTT 2688800 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 ||||||||| | ||| ||||| | ||||| || | ||||||||||| || || Sbjct 2688801 GGCCTTGACGTTGTCGATCGTGTCGGAACTCTCGACTTCGAGGGTGATGGTTTTGCCGGT 2688860 Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007 | |||||| |||||||| ||||| Sbjct 2688861 CAAAGTTTTGACAAAGATTTGCAT 2688884 Score = 102 bits (112), Expect = 7e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCC 94869 ||||| || || || | ||||||||| ||| | ||| | |||||||| || || || Sbjct 2688232 GTAGACTCTTTCTGAATGTTATAATCAGCTAA-AGTCCTCCCATCCTCCAATTGCTTCCC 2688290 Query 94870 GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929 | ||||||| | |||||||||||||| || || ||||| || || | ||| |||||||| Sbjct 2688291 GGCAAAGATAAGCCTTTGCTGATCTGGGGGGATTCCTTCCTTATCCTGAATCTTTGCCTT 2688350 Query 94930 GACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989 ||| ||| || || | || || || | ||||| ||||||||||| | || Sbjct 2688351 GACATTATCGATTGTATCCGAACTTTCCACCTCCAAGGTGATTGTTTTTCCAGTCAAGGT 2688410 Query 94990 TTTCACAAAGATCTGCAT 95007 || ||||| |||||||| Sbjct 2688411 CTTGACAAAAATCTGCAT 2688428 Score = 100 bits (110), Expect = 3e-16 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCT 94856 |||| ||| | ||| || ||||| || | ||||||||| || || || || || | Sbjct 2688904 ACCAGGTGGAGAGTTGACTCCTTCTGGATGTTATAATCCGCCA-AG-GTACGACCGTCTT 2688961 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | |||||||| ||| | ||||| | |||||||| || || || || ||||| ||||| | Sbjct 2688962 CGAGCTGTTTCCCGGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTT 2689021 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || ||||||||| | ||| ||||| | || || || | |||||||||| Sbjct 2689022 GGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAACTCTCCACTTCGAGGGTGATGGTTT 2689081 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || | ||||| || ||||||||||| Sbjct 2689082 TACCGGTCAAGGTTTTGACGAAGATCTGCAT 2689112 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||| ||| | ||| || ||||| || | ||| ||||| || || | || || Sbjct 2689132 ACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGTACGGCCGTCTTCG 2689191 Query 94859 AGCTGTTTTCCGC-CAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||||| || | | ||||| | |||||||| || || || || ||||| ||||| | Sbjct 2689192 AGCTGTTTGCCACGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTG 2689251 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | ||| ||||| | ||||| || | || ||||| || Sbjct 2689252 GATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACCTCGAGAGTTATGGTCTT 2689311 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || |||||||| ||||||||||| Sbjct 2689312 GCCGGTCAGGGTTTTCACGAAGATCTGCAT 2689341 Score = 86.0 bits (94), Expect = 6e-12 Identities = 164/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || |||||| | | | ||| || | || | || ||||||||||| | Sbjct 2688417 AAAAATCTGCATTCCTCCACGAAGCCTCAAAACAAGATGAAGGGTTGATTCCTTTTGTAT 2688476 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| ||||| || || | ||||| ||||| || || | ||||| |||| ||| Sbjct 2688477 GTTGTAATCAGCCAAGGTCCTCCCGTCCTCAAGCTGCTTCCCAGCGAAGATCAATCGTTG 2688536 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 || ||||| || || ||||| || || | || || ||||| ||| | | ||||| Sbjct 2688537 TTGGTCTGGTGGGATCCCTTCCTTATCTTGGATCTTGGCCTTAACGTTATCAATCGTGTC 2688596 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | ||||| || | || || || ||||| || | ||||| |||||||| ||||| Sbjct 2688597 CGAGCTCTCGACCTCCAGGGTTATAGTCTTTCCTGTCAAGGTTTTGACAAAGATTTGCAT 2688656 Query 95008 GC 95009 || Sbjct 2688657 GC 2688658 >seq9 Length=38630433 Score = 114 bits (126), Expect = 1e-20 Identities = 154/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCT 94856 |||| ||| | ||| ||||||||||| | || ||||| | || || ||| | || | Sbjct 27803244 ACCAGGTGGAGAGTCGATTCCTTTTGGATATTGTAATC-CGCA-AGGGTTCGGCCGTCTT 27803187 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || || || ||| | ||||| || | || ||||| |||||||| ||||| ||||| | Sbjct 27803186 CAAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCTT 27803127 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || ||||||||| | ||| ||||| | | || || || | |||||||||| Sbjct 27803126 GGATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCGAGGGTGATGGTTT 27803067 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || |||||||| ||||||||||| Sbjct 27803066 TGCCGGTTAGGGTTTTCACGAAGATCTGCAT 27803036 Score = 98.7 bits (108), Expect = 9e-16 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || || | ||||| |||| || || || ||||| || || || ||| Sbjct 27803418 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCCGGAGGGATGCCCTCCTTG 27803359 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| ||| | ||| ||||||| | ||||| |||| |||||| Sbjct 27803358 TCTTGGATCTTGGCCTTAACGTTGTCGATCGTGTCAGAGCTTTCGACTTCAAGAGTGATG 27803299 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || || || ||||| || ||||||||||||| Sbjct 27803298 GTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCATGC 27803262 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 ||||| ||||| || | ||| ||||| | ||| |||||||| || || || Sbjct 27803916 GTAGACTCCTTCTGGATGTTGTAATCTGCAAGAGTACGCCCATCCTCCAATTGCTTCCCA 27803857 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | || || | || |||||||| || ||||| || || || || | |||||| ||||| Sbjct 27803856 GCGAAAATGAGCCTCTGCTGATCAGGTGGAATCCCCTCCTTATCTTGAATTTTCGCCTTC 27803797 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| ||| || |||| || || |||| ||| || || |||||||| || || Sbjct 27803796 ACGTTATCGATTGTATCAGAACTCTCCACCTCAAGCGTAATCGTCTTTCCAGTCAGCGTC 27803737 Query 94991 TTCACAAAGATCTGCAT 95007 ||||| ||||||||||| Sbjct 27803736 TTCACGAAGATCTGCAT 27803720 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 94795 CAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGT--TGGAA 94852 || ||| | ||| | ||| || ||||| || | ||| ||||| | || || || || Sbjct 27803704 CAGCACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATC-CGCA-AGGGTCCTGCCG 27803647 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||| ||| || ||| | || || || || |||||||| ||||| || ||||| || Sbjct 27803646 TCCTCCAACTGCTTCCCGGCGAATATCAACCTCTGCTGATCCGGAGGGATCCCTTCCTTA 27803587 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||||||||||||||| | | || || | || || || | || || Sbjct 27803586 TCCTGGATTTTTGCCTTGACGTTATCAATTGTATCCGAACTCTCTACCTCCAGAGTAATA 27803527 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||| || || | ||||| || || |||||||||| Sbjct 27803526 GTTTTCCCGGTCAAGGTTTTAACGAAAATCTGCATGC 27803490 >seq6 Length=26303135 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 94795 CAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA-- 94852 ||| ||||| || | || || || || || | ||||||||| || ||| | || Sbjct 25054317 CAAAACCAAATGAAGTGTCGACTCTTTCTGAATGTTATAATCAGCCAAAGT--TCGACCG 25054260 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || || ||||||| | |||||||| ||||| || || ||||| ||| Sbjct 25054259 TCCTCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGCGGGATTCCTTCCTTG 25054200 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| ||| | ||| ||||| | | ||||| || | || || Sbjct 25054199 TCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCGACTTCCAGGGTTATC 25054140 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || || || ||||||||||| Sbjct 25054139 GTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 25054105 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| |||| ||| | || || ||||| || | || ||||| || ||| | | Sbjct 25054547 CGCAAGACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCCAGAGTCCTTCCA 25054488 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||| || || || |||| || || |||||||||||||| ||||| ||||| ||| Sbjct 25054487 TCTTCCAATTGCTTCCCAGCAAATATCAACCTTTGCTGATCTGGTGGAATCCCTTCCTTG 25054428 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| |||||||| || | | || || | | || || || | || ||| Sbjct 25054427 TCCTGAATCTTTGCCTTAACATTATCAATGGTATCCGAGCTCTCCACCTCCAAAGTAATG 25054368 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || ||||| || || || |||||||| Sbjct 25054367 GTTTTCCCTGTCAGAGTCTTAACGAAAATCTGCAT 25054333 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | ||| || ||||| || | ||| |||||| || || | ||||| ||||| Sbjct 25054080 GTGGAGAGTCGACTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCCGTCCTCGAGCTG 25054021 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 || || ||||||| | ||||| || || || || || ||||| ||||| | || || Sbjct 25054020 CTTCCCAGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATCCCTTCCTTGTCCTGGATCTT 25053961 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 ||||| ||| | ||| ||||| | ||||| || | ||||| || || || || Sbjct 25053960 GGCCTTCACGTTGTCGATCGTGTCGGAACTCTCGACTTCGAGGGTGATTGTCTTGCCGGT 25053901 Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||||||||| Sbjct 25053900 GAGTGTCTTAACGAAGATCTGCAT 25053877 >seq2 Length=41236440 Score = 93.3 bits (102), Expect = 4e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || ||||| || ||| | ||||| | | ||| || || ||||| || ||||| ||| Sbjct 32406554 TCTTCAAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCCGGAGGGATGCCTTCCTTG 32406613 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||||| | ||| ||||| | | ||||| || | || ||| Sbjct 32406614 TCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCGACCTCCAAGGTTATG 32406673 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011 || || || || || |||||||| |||||||||||| || Sbjct 32406674 GTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATGGTT 32406712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448288784831160