Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq6 118 7e-22 seq5 118 7e-22 seq7 114 9e-21 seq9 102 5e-17 seq1 89.7 3e-13 seq2 87.8 1e-12 >seq6 Length=26303135 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | | ||||| |||| ||||| ||| |||||| |||||||||||||||| Sbjct 25054560 ACCACCACGAAGGCGCAAGACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCAGC 25054501 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 || | | | | || || ||||| || || |||||||| | | ||| ||||| | || Sbjct 25054500 CAGAGTCCTTCCATCTTCCAATTGCTTCCCAGCAAATATCAACCTTTGCTGATCTGGTGG 25054441 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | ||||| |||||| ||| ||| ||| ||||| | | ||||| || || || Sbjct 25054440 AATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTATCAATGGTATCCGAGCTCTCCAC 25054381 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || ||||| ||||| || |||| || || ||||| |||||||| Sbjct 25054380 CTCCAAAGTAATGGTTTTCCCTGTCAGAGTCTTAACGAAAATCTGCAT 25054333 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 ||| ||||||||||| || ||| || ||||| || ||||||| |||| || |||| Sbjct 25054317 CAAAACCAAATGAAGTGTCGACTCTTTCTGAATGTTATAATCAGCCAAAGTTCGACCGTC 25054258 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | || || || ||||| || || | ||| || || | |||| ||||| ||||| Sbjct 25054257 CTCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGCGGGATTCCTTCCTTGTC 25054198 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || || |||||| || | || || || ||||| ||||| | || || || Sbjct 25054197 CTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCGACTTCCAGGGTTATCGT 25054138 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||||||| ||| || ||||| |||||||| Sbjct 25054137 CTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 25054105 >seq5 Length=39371879 Score = 118 bits (130), Expect = 7e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 || ||||| ||||||||| ||||| ||||||| |||| ||| |||| || | ||| Sbjct 2688682 TGGAGAGTCGACTCCTTTTGGATATTATAATCAGCCAAAGTACGGCCGTCCTCCAGCTGT 2688741 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || ||||| || || || || ||||| |||| |||| ||||||||||||| ||||| Sbjct 2688742 TTCCCGGCGAAGATGAGCCGCTGTTGGTCGGGAGGGATGCCTTCTTTGTCCTGGATTTTG 2688801 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||| || || | || || || ||| || ||||| | || || ||||| || ||| Sbjct 2688802 GCCTTGACGTTGTCGATCGTGTCGGAACTCTCGACTTCGAGGGTGATGGTTTTGCCGGTC 2688861 Query 38295 AAGGTTTTCACGAATATCTGCAT 38317 || ||||| || || || ||||| Sbjct 2688862 AAAGTTTTGACAAAGATTTGCAT 2688884 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 |||| || ||||| |||||| || || || ||||| | ||| ||| |||| || Sbjct 2688904 ACCAGGTGGAGAGTTGACTCCTTCTGGATGTTATAATCCGCCAAGGTACGACCGTCTTCG 2688963 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | ||||| ||||| || || || | ||| || |||| |||| ||||| ||||| Sbjct 2688964 AGCTGTTTCCCGGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGG 2689023 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || || ||| || || | || || || ||| || ||||| | || || |||||| Sbjct 2689024 ATCTTGGCCTTGACGTTGTCGATCGTGTCGGAACTCTCCACTTCGAGGGTGATGGTTTTA 2689083 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || ||||||||||| ||||| |||||||| Sbjct 2689084 CCGGTCAAGGTTTTGACGAAGATCTGCAT 2689112 Score = 82.4 bits (90), Expect = 5e-11 Identities = 151/220 (69%), Gaps = 1/220 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 |||| || ||||| |||||| || || |||||||| | ||| ||| |||| || Sbjct 2689132 ACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGTACGGCCGTCTTCG 2689191 Query 38169 AATTGTTTTCCG-GCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCAT 38227 | ||||| || || || || || | ||| || |||| |||| ||||| ||||| Sbjct 2689192 AGCTGTTTGCCACGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTG 2689251 Query 38228 AATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTT 38287 || || ||| || || | || || || ||| || || || | || || || || Sbjct 2689252 GATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACCTCGAGAGTTATGGTCTT 2689311 Query 38288 ACCCGTCAAGGTTTTCACGAATATCTGCATGTTTTACAAG 38327 || |||| |||||||||||| |||||||| || || ||| Sbjct 2689312 GCCGGTCAGGGTTTTCACGAAGATCTGCATCTTCTAAAAG 2689351 >seq7 Length=21614486 Score = 114 bits (126), Expect = 9e-21 Identities = 168/234 (72%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| | || ||||| |||||| || || || ||||||||| |||||||||| Sbjct 2883012 CATT-CCACCACGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAAT 2883070 Query 38146 CAGACAAAACACGTTCG-TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 | | ||| | | | || || || ||||| ||||||||||| || | |||||||| Sbjct 2883071 CTG-CAAGCGTCCTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCT 2883129 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264 | |||| ||||| |||||| || || || ||||| | | ||||| ||| Sbjct 2883130 GGAGGGATACCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTC 2883189 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||||||| || |||||||| || || || | || ||||| || || |||||| Sbjct 2883190 TCAACTTCCAAGGTAATAGTCTTTCCAGTGAGAGTCTTCACAAAAATTTGCATG 2883243 Score = 114 bits (126), Expect = 9e-21 Identities = 168/234 (72%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| | || ||||| |||||| || || || ||||||||| |||||||||| Sbjct 2896002 CATT-CCACCACGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAAT 2896060 Query 38146 CAGACAAAACACGTTCG-TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 | | ||| | | | || || || ||||| ||||||||||| || | |||||||| Sbjct 2896061 CTG-CAAGCGTCCTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCT 2896119 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264 | |||| ||||| |||||| || || || ||||| | | ||||| ||| Sbjct 2896120 GGAGGGATACCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTC 2896179 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||||||| || ||||| || || || || | |||||||| || || |||||| Sbjct 2896180 TCAACTTCCAAGGTAATTGTCTTTCCAGTGAGAGTTTTCACAAAAATTTGCATG 2896233 Score = 98.7 bits (108), Expect = 7e-16 Identities = 155/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 38103 CGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG 38162 |||||||||||||| || || |||||| ||||| || || || | ||| |||| Sbjct 2896246 CGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTG-CAAGG---GTTCT 2896301 Query 38163 ----TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTC 38218 || || | |||||||||||||| |||| | || || || | |||| || || Sbjct 2896302 GCCATCTTCAAGCTGTTTTCCGGCAAAAATTAACCTCTGCTGGTCCGGTGGGATACCCTC 2896361 Query 38219 TTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGT 38278 |||||| ||| || ||||||||| | || ||||| ||| || || || || || Sbjct 2896362 CTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCACCTCCAAAGT 2896421 Query 38279 AATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || ||||| || || | |||||||| |||||||||||| Sbjct 2896422 GATGGTTTTCCCAGTGAGAGTTTTCACAAATATCTGCATG 2896461 Score = 93.3 bits (102), Expect = 3e-14 Identities = 154/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 38103 CGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG 38162 |||||||||||||| || || |||||| ||||| || || || | ||| |||| Sbjct 2883256 CGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTG-CAAGG---GTTCT 2883311 Query 38163 ----TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTC 38218 || || | |||||||| ||||| |||| | || || || | |||| || || Sbjct 2883312 GCCATCTTCAAGCTGTTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGGATACCCTC 2883371 Query 38219 TTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGT 38278 |||||| ||| || ||||||||| | || ||||| ||| || || || || || Sbjct 2883372 CTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCACCTCCAAAGT 2883431 Query 38279 AATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || ||||| || || | |||||||| |||||||||||| Sbjct 2883432 GATGGTTTTCCCAGTGAGAGTTTTCACAAATATCTGCATG 2883471 Score = 89.7 bits (98), Expect = 3e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173 |||||| ||| |||||| || |||||||| |||| || | || | || || || || Sbjct 2882583 ATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATCCTCCAACTG 2882642 Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 || || ||||| || | | || || || | || | || || |||||| ||| || Sbjct 2882643 CTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTGAATCTT 2882702 Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293 | |||||||| | | || ||| || ||||| || | || || ||||| || || Sbjct 2882703 TGCTTTCACATTGTCAATCGTGTCTGAGCTCTCAACCTCCAGGGTGATGGTTTTCCCAGT 2882762 Query 38294 CAAGGTTTTCACGAATATCTGCAT 38317 |||||| ||||| ||||||||||| Sbjct 2882763 CAAGGTCTTCACAAATATCTGCAT 2882786 >seq9 Length=38630433 Score = 102 bits (112), Expect = 5e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC-GTCGTCTAATTG 38173 ||||||||| |||||| || || |||||||| | ||| | | | ||| || || || Sbjct 27803694 TGAAGAGTGGACTCCTTCTGGATGTTGTAATCCG-CAAGGGTCCTGCCGTCCTCCAACTG 27803636 Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 || ||||| ||||| | | || ||||| | |||| ||||| || ||| ||||| Sbjct 27803635 CTTCCCGGCGAATATCAACCTCTGCTGATCCGGAGGGATCCCTTCCTTATCCTGGATTTT 27803576 Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293 | ||| || || | | ||||| ||| || || || | ||||||||||| || || Sbjct 27803575 TGCCTTGACGTTATCAATTGTATCCGAACTCTCTACCTCCAGAGTAATAGTTTTCCCGGT 27803516 Query 38294 CAAGGTTTTCACGAATATCTGCATG 38318 ||||||||| ||||| ||||||||| Sbjct 27803515 CAAGGTTTTAACGAAAATCTGCATG 27803491 Score = 89.7 bits (98), Expect = 3e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 |||| || ||||| |||||||| ||||||||||| | | || |||| || Sbjct 27803244 ACCAGGTGGAGAGTCGATTCCTTTTGGATATTGTAATCCGCAAGGGTTCGGCCGTCTTCA 27803185 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | ||| || ||||| || || | ||| |||||||| | || | |||||| ||||| Sbjct 27803184 AGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCTTGG 27803125 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || || ||| || || | || || ||| || || || || | || || ||||| Sbjct 27803124 ATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCGAGGGTGATGGTTTTG 27803065 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCATGTTTTACAAG 38327 || || | |||||||||||| |||||||| || ||| || Sbjct 27803064 CCGGTTAGGGTTTTCACGAAGATCTGCATCTTGTACGAG 27803026 >seq1 Length=37323695 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||||| | ||| | |||||||||||| ||| |||||| || ||||| || |||| Sbjct 11148008 CCACCTCGAAGACGAAGCACCAAATGAAGGGTGGACTCCTTCTGGATATTATAGTCAGCT 11147949 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || |||| || | ||||| || ||||| || || | ||||||||| | ||| Sbjct 11147948 AGGGTGCGACCGTCTTCAAGCTGTTTGCCAGCAAAGATAAGTCTTTGTTGATCAGGAGGG 11147889 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| ||||| || || || ||||| | | |||||| || ||||| Sbjct 11147888 ATTCCTTCCTTGTCTTGGATCTTCGCTTTAACATTGTCAATAGTATCAGAGCTCTCAACC 11147829 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || ||||| || || || | || || || || || ||||| Sbjct 11147828 TCCAAGGTGATAGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 11147782 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | |||||||||||||| ||||| || |||||||| ||||| || |||| Sbjct 11148464 CCACCACGTAAACGCAACACCAAGTGAAGGGTAGATTCCTTTTGGATATTATAGTCAGCG 11148405 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | | | | || || | || || || ||||| || || | ||| || || | ||| Sbjct 11148404 AGAGTTCTTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 11148345 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || || || || ||| ||||||||| | | || ||| ||| ||||| Sbjct 11148344 ATACCCTCCTTATCTTGGATCTTTGCCTTCACATTATCAATGGTGTCTGAACTCTCAACC 11148285 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || ||||| ||||| || || || | || ||||| || || ||||| Sbjct 11148284 TCCAATGTGATAGTCTTTCCGGTAAGAGTCTTCACAAAAATTTGCAT 11148238 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| || | ||| | || | ||||| ||| ||||| ||||||||||| || | Sbjct 32435688 CCACCCCTGAGACGGAGGACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAGTCGGCT 32435747 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || || |||| || | || || ||||| || || || ||||| ||||| | ||| Sbjct 32435748 AAGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGATCCGGTGGG 32435807 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| |||||| || || || ||||| | || || || ||| || Sbjct 32435808 ATTCCTTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGGATTCGACC 32435867 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321 |||| || || || || ||||| | |||||| ||||| |||||||| ||| Sbjct 32435868 TCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTGACGAAGATCTGCATCTTT 32435918 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | ||||| ||||| || |||||||||||| || ||||||| | Sbjct 11148236 CCACCACGAAGACGGAGAACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAATCAG-C 11148178 Query 38151 AAAACACGTT-CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 || | || | || || | ||||||||| ||||| || | | || ||||| | || Sbjct 11148177 AAGTGTCCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAACCTCTGCTGATCTGGTGG 11148118 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || || ||||| ||| ||| || ||| ||||| | | ||| || || || || Sbjct 11148117 GATACCCTCTTTATCCTGAATCTTAGCCTTGACATTGTCAATAGTGTCCGAGCTCTCTAC 11148058 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || || |||||||| || | || || || || || |||||| Sbjct 11148057 CTCCAAAGTGATCGTTTTACCTGTGAGAGTCTTGACAAAGATTTGCATG 11148009 >seq2 Length=41236440 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 |||| ||| || ||| |||||| ||||| || || || | | ||| |||| || Sbjct 32406500 ACCAGATGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCTAGGGTACGGCCGTCTTCA 32406559 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | || || ||||| || || || |||||||| || | |||| |||||| ||||| Sbjct 32406560 AGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCCGGAGGGATGCCTTCCTTGTCTTGG 32406619 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || || ||| || || | || || || ||| || || || || || || ||| Sbjct 32406620 ATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCGACCTCCAAGGTTATGGTCTTA 32406679 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321 ||||| | |||||||||||| ||||||||| || Sbjct 32406680 CCCGTTAGGGTTTTCACGAAGATCTGCATGGTT 32406712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945440585161