Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1 143 6e-29 seq5 129 1e-24 seq9 123 6e-23 seq2 122 2e-22 seq7 116 9e-21 seq6 114 3e-20 >seq1 Length=37323695 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | || ||||| |||| ||| ||| || || ||||| |||||||| Sbjct 32435688 CCACCCCTGAGACGGAGGACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAGTCGGCT 32435747 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| |||||||| | || || || |||||||| ||||| || ||| |||| Sbjct 32435748 AAGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGATCCGGTGGG 32435807 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || |||||||| || ||||| || || || || | || ||||| || Sbjct 32435808 ATTCCTTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGGATTCGACC 32435867 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || |||||||| || || || |||||||| |||||||| Sbjct 32435868 TCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTGACGAAGATCTGCAT 32435914 Score = 138 bits (152), Expect = 3e-27 Identities = 173/235 (74%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | ||| || | ||||| ||| || || ||||||||||||| Sbjct 11148012 CATG-CCACCTCGAAGACGAAGCACCAAATGAAGGGTGGACTCCTTCTGGATATTATAGT 11147954 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| |||||||| | ||||| || || ||||| || | |||||| | Sbjct 11147953 CAGCTAGGGTGCGACCGTCTTCAAGCTGTTTGCCAGCAAAGATAAGTCTTTGTTGATCAG 11147894 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 ||||||||||| || || ||||| |||||||| || || || |||| ||| |||| Sbjct 11147893 GAGGGATTCCTTCCTTGTCTTGGATCTTCGCTTTAACATTGTCAATAGTATCAGAGCTC- 11147835 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| ||||| || || || |||||||| || || ||||| Sbjct 11147834 --TCAACCTCCAAGGTGATAGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 11147782 Score = 107 bits (118), Expect = 5e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || ||||| || || || || | ||| ||||| | ||||||||| || || Sbjct 11148200 TCCTTTTGAATGTTATAATCAGCAAGTGTCCTTCCATCTTCAAGTTGTTTTCCAGCAAAA 11148141 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| ||| |||||| || ||||||||||| || || || || || || Sbjct 11148140 ATCAACCTCTGCTGATCTGGTGGGATACCCTCTTTATCCTGAATCTTAGCCTTGACATTG 11148081 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || |||| || |||| ||||| || | |||||||| || || || ||||||||| Sbjct 11148080 TCAATAGTGTCCGAGCTC---TCTACCTCCAAAGTGATCGTTTTACCTGTGAGAGTCTTG 11148024 Query 288460 ACGAATATCTGCAT 288473 || || || ||||| Sbjct 11148023 ACAAAGATTTGCAT 11148010 Score = 102 bits (112), Expect = 2e-16 Identities = 164/233 (70%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | ||| | ||| || || |||||||||||||| || Sbjct 11147780 CCACCACGGAGACGAAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTATAGTCAGCT 11147721 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCT 288363 || || || || ||||| | ||||| || || || || || | |||| | || | Sbjct 11147720 AGGGTTCGACCATCTTCAAGCTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCAGGA--- 11147664 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||||||||||| || || ||||| || || || || || || |||| ||| |||| Sbjct 11147663 GGGATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTGTCAATAGTATCAGAGCTC--- 11147607 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| || || || || || || || || ||||| Sbjct 11147606 TCAACCTCAAGGGTGATGGTCTTGCCTGTTAGGGTTTTCACAAAGATTTGCAT 11147554 Score = 96.9 bits (106), Expect = 8e-15 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||||||||||||||| ||||| || | ||| ||||| | || || || || || Sbjct 11148429 TTCCTTTTGGATATTATAGTCAGCGAGAGTTCTTCCATCTTCAAGCTGCTTGCCAGCAAA 11148370 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | || || |||||| || || ||||| ||||| || || ||||| || Sbjct 11148369 GATGAGCCTTTGCTGGTCTGGTGGGATACCCTCCTTATCTTGGATCTTTGCCTTCACATT 11148310 Query 288402 TTCTATAGAATCGCTCGATTCT--ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | | || | ||| || || | ||||| ||||| ||||| |||||||| Sbjct 11148309 ATCAATGG--TGTCTGAACTCTCAACCTCCAATGTGATAGTCTTTCCGGTAAGAGTCTTC 11148252 Query 288460 ACGAATATCTGCAT 288473 || || || ||||| Sbjct 11148251 ACAAAAATTTGCAT 11148238 >seq5 Length=39371879 Score = 129 bits (142), Expect = 1e-24 Identities = 171/235 (73%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| || || || || || | || || |||||||||||||| | Sbjct 2688654 CATG-CCTCCACGGAGCCTGAGGACAAGGTGGAGAGTCGACTCCTTTTGGATATTATAAT 2688712 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || | || || ||||| || | ||||| || |||||||| || |||||||| Sbjct 2688713 CAGCCAAAGTACGGCCGTCCTCCAGCTGTTTCCCGGCGAAGATGAGCCGCTGTTGGTCGG 2688772 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCG 288418 ||||| |||||||| ||||||||||| || || ||||| || || | ||| ||| Sbjct 2688773 GAGGGATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTGTCGATCGTGTCGGAACTC- 2688831 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| ||||| || || ||||||| ||| ||||| || || ||||| Sbjct 2688832 --TCGACTTCGAGGGTGATGGTTTTGCCGGTCAAAGTTTTGACAAAGATTTGCAT 2688884 Score = 91.5 bits (100), Expect = 3e-13 Identities = 164/237 (69%), Gaps = 12/237 (5%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| ||||| | ||| || || || | || ||||| || || ||||| || Sbjct 2688199 TGCCCACCACGGAGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTATAATCA 2688258 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || | || | || || || ||||| || || || ||||| || | || ||| ||| Sbjct 2688259 GCTAAAGTCCTCCCATCCTCCAATTGCTTCCCGGCAAAGATAAGCCTTTGCTGA---TCT 2688315 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA- 288419 ||| |||||||| |||||||| || || || || || || || || | ||| ||| Sbjct 2688316 GGGGGGATTCCTTCCTTATCCTGAATCTTTGCCTTGACATTATCGATTGTATC---CGAA 2688372 Query 288420 --TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || || | ||||| || || || |||| |||||||| || ||||||||| Sbjct 2688373 CTTTCCACCTCCAAGGTGATTGTTTTTCCAGTCAAGGTCTTGACAAAAATCTGCATT 2688429 >seq9 Length=38630433 Score = 123 bits (136), Expect = 6e-23 Identities = 170/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| | ||||| || || | || ||| ||||||||||| || | Sbjct 27803266 CATG-CCGCCACGGAGACGGAGTACCAGGTGGAGAGTCGATTCCTTTTGGATATTGTAAT 27803208 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || || |||||||| | ||| || || |||||||||| ||||||||| | Sbjct 27803207 CCGCAAGGGTTCGGCCGTCTTCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGATCAG 27803148 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 || || ||||| || || ||||| || || || ||||| || || | || |||| Sbjct 27803147 GAGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTC- 27803089 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || ||||| || || || ||||| |||||||| Sbjct 27803088 --TCCACCTCGAGGGTGATGGTTTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 27803036 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| || || || || |||| ||| || || ||||| || || || || Sbjct 27803718 CCTCCACGGAGCCTCAGCACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGCA 27803659 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||||| || || || || || ||||| |||| | ||| ||| ||| Sbjct 27803658 AGGGTCCTGCCGTCCTCCAACTGCTTCCCGGCGAATATCAACCTCTGCTGATCCGGAGGG 27803599 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA---TTCT 288423 || ||||| |||||||||||||| || || ||||| || || | ||| ||| ||| Sbjct 27803598 ATCCCTTCCTTATCCTGGATTTTTGCCTTGACGTTATCAATTGTATC---CGAACTCTCT 27803542 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || |||||||||| || || ||||| |||||||| Sbjct 27803541 ACCTCCAGAGTAATAGTTTTCCCGGTCAAGGTTTTAACGAAAATCTGCAT 27803492 >seq2 Length=41236440 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || ||||| | ||| || || || || ||||||||||| Sbjct 32406482 CCACCGCGGAGGCGGAGGACCAGATGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCT 32406541 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | || || || |||||||| ||||| ||||| ||| Sbjct 32406542 AGGGTACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCCGGAGGG 32406601 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || ||||| || || || ||||| || || | ||| ||||| || Sbjct 32406602 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCGACC 32406661 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || ||||| || || || || || ||||| |||||||| Sbjct 32406662 TCCAAGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 32406708 >seq7 Length=21614486 Score = 116 bits (128), Expect = 9e-21 Identities = 167/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || ||||||| ||| || || |||||||| ||||| || Sbjct 2895550 CCACCACGGAGGCGAAGGACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCC 2895609 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || || || || || ||||||| | ||| || ||||| Sbjct 2895610 AGAGTGCGACCATCCTCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGG---TCTGGA 2895666 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || ||||| || || |||||||| || || || | || |||| Sbjct 2895667 GGAATCCCCTCCTTGTCCTGAATCTTTGCTTTCACATTGTCAATTGTGTCTGAGCTC--- 2895723 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || ||||| |||| |||||||| ||||||||||| Sbjct 2895724 TCAACCTCCAGGGTGATGGTTTTCCCAGTCAATGTCTTGACAAATATCTGCAT 2895776 Score = 111 bits (122), Expect = 4e-19 Identities = 166/233 (71%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || ||||||| ||| || || |||||||| ||||| || Sbjct 2882560 CCACCACGGAGGCGAAGGACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCC 2882619 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || || || || || ||||||| | ||| || ||||| Sbjct 2882620 AGAGTGCGACCATCCTCCAACTGCTTGCCAGCAAAGATCAACCTCTGCTGG---TCTGGA 2882676 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || ||||| || || |||||||| || || || | || |||| Sbjct 2882677 GGAATCCCCTCCTTGTCCTGAATCTTTGCTTTCACATTGTCAATCGTGTCTGAGCTC--- 2882733 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || ||||| |||| ||||| || ||||||||||| Sbjct 2882734 TCAACCTCCAGGGTGATGGTTTTCCCAGTCAAGGTCTTCACAAATATCTGCAT 2882786 Score = 100 bits (110), Expect = 7e-16 Identities = 142/197 (72%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||||||||| || || || ||||| | || || || || ||||| || || || Sbjct 2883052 TCCTTTTGGATATTGTAATCTGCAAGCGTCCTCCCATCCTCCAACTGTTTGCCGGCAAAT 2883111 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | |||||| |||| ||||| ||||| || |||||||| || ||||| || Sbjct 2883112 ATCAGCCTCTGTTG---ATCTGGAGGGATACCTTCCTTGTCCTGGATCTTAGCTTTTACA 2883168 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||| ||| || ||||| | || || ||||| || || |||||| Sbjct 2883169 TTGTCAATGGTATCAGAACTC---TCAACTTCCAAGGTAATAGTCTTTCCAGTGAGAGTC 2883225 Query 288457 TTGACGAATATCTGCAT 288473 || || || || ||||| Sbjct 2883226 TTCACAAAAATTTGCAT 2883242 Score = 96.9 bits (106), Expect = 8e-15 Identities = 141/197 (72%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||||||||| || || || ||||| | || || || || ||||| || || || Sbjct 2896042 TCCTTTTGGATATTGTAATCTGCAAGCGTCCTCCCATCCTCCAACTGTTTGCCGGCAAAT 2896101 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | |||||| |||| ||||| ||||| || |||||||| || ||||| || Sbjct 2896102 ATCAGCCTCTGTTG---ATCTGGAGGGATACCTTCCTTGTCCTGGATCTTAGCTTTTACA 2896158 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||| ||| || ||||| | || || ||||| || || ||||| Sbjct 2896159 TTGTCAATGGTATCAGAACTC---TCAACTTCCAAGGTAATTGTCTTTCCAGTGAGAGTT 2896215 Query 288457 TTGACGAATATCTGCAT 288473 || || || || ||||| Sbjct 2896216 TTCACAAAAATTTGCAT 2896232 >seq6 Length=26303135 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || | || | ||||| || ||||| || || ||||| || || Sbjct 25054331 CCACCACGGAGCCTCAAAACCAAATGAAGTGTCGACTCTTTCTGAATGTTATAATCAGCC 25054272 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 | || || ||||| || | || || || || ||||| || | || || ||||| Sbjct 25054271 AAAGTTCGACCGTCCTCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGG---TCTGGC 25054215 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||||||| || |||||||| || || |||||||| || || | ||| ||| Sbjct 25054214 GGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCG 25054155 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || |||||||| || ||||| ||||||||||| |||||||| Sbjct 25054154 ACTTCCAGGGTTATCGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 25054105 Score = 87.8 bits (96), Expect = 4e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | | || || |||| ||| || || || ||||| || || || Sbjct 25054559 CCACCACGAAGGCGCAAGACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCC 25054500 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| ||||| ||||| || || || || |||| | || ||| ||| Sbjct 25054499 AGAGTCCTTCCATCTTCCAATTGCTTCCCAGCAAATATCAACCTTTGCTGATCTGGTGGA 25054440 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || ||||| || || || || || || || || | ||| |||| || Sbjct 25054439 ATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTATCAATGGTATCCGAGCTC---TCC 25054383 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | || || || ||||| ||||||||||| ||||| |||||||| Sbjct 25054382 ACCTCCAAAGTAATGGTTTTCCCTGTCAGAGTCTTAACGAAAATCTGCAT 25054333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179647885727218