Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq5 147 2e-30 seq7 127 2e-24 seq9 125 7e-24 seq1 104 2e-17 seq6 102 8e-17 >seq5 Length=39371879 Score = 147 bits (162), Expect = 2e-30 Identities = 153/198 (77%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| ||||| ||||| ||||| ||| || || || || |||||||| || Sbjct 2688688 GTCGACTCCTTTTGGATATTATAATCAGCCAAAGTACGGCCGTCCTCCAGCTGTTTCCCG 2688747 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||| || |||||||| ||||| || |||||| |||||| |||| Sbjct 2688748 GCGAAGATGAGCCGCTGTTGGTCGGGAGGGATGCCTTCTTTGTCCTGGATTTTGGCCTTG 2688807 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| ||||| | |||||||||||||| ||| | ||||||||||||| ||| Sbjct 2688808 ACGTTGT-CGATCGTGTCGGAACTCTCGACTTCGAGGGTGATGGTTTTGCCGGTCAAAGT 2688866 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| ||||| || ||||| Sbjct 2688867 TTTGACAAAGATTTGCAT 2688884 Score = 109 bits (120), Expect = 5e-19 Identities = 146/199 (73%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || |||||||| ||| || || || || |||||||| ||| Sbjct 2689144 GTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGTACGGCCGTCTTCGAGCTGTTTGCCA 2689203 Query 126977 -GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 ||| |||| | | ||||| ||||| || || || |||||||| ||| || ||| Sbjct 2689204 CGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTT 2689263 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | ||||| ||| |||||| | ||||||||| |||| || | || ||||||||||| | Sbjct 2689264 AACGTTGT-CGATGGTGTCGGAACTCTCGACCTCGAGAGTTATGGTCTTGCCGGTCAGGG 2689322 Query 127095 TTTTTACAAAAATCTGCAT 127113 |||| || || |||||||| Sbjct 2689323 TTTTCACGAAGATCTGCAT 2689341 >seq7 Length=21614486 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||||||| | || ||||| || ||||| || || || | Sbjct 2883244 CCACCACGGAGTCGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCA 2883303 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || |||||||||||||| | || || | |||||| || || || Sbjct 2883304 AGGGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGG 2883363 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| || || ||| | | |||| ||| |||| |||||| || Sbjct 2883364 ATACCCTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCACC 2883423 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | ||||| || || |||||||| ||||| ||||||||| Sbjct 2883424 TCCAAAGTGATGGTTTTCCCAGTGAGAGTTTTCACAAATATCTGCATG 2883471 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||||||||||||| | || ||||| || ||||| || || || | Sbjct 2896234 CCACCACGAAGCCGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCA 2896293 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || ||||||||||| || | || || | |||||| || || || Sbjct 2896294 AGGGTTCTGCCATCTTCAAGCTGTTTTCCGGCAAAAATTAACCTCTGCTGGTCCGGTGGG 2896353 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| || || ||| | | |||| ||| |||| |||||| || Sbjct 2896354 ATACCCTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCACC 2896413 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | ||||| || || |||||||| ||||| ||||||||| Sbjct 2896414 TCCAAAGTGATGGTTTTCCCAGTGAGAGTTTTCACAAATATCTGCATG 2896461 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | |||| |||||| || | || ||||| ||||| ||||||||||| | Sbjct 2896005 TCCACCACGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATCTGC 2896064 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||| | ||| || | |||||| || || | |||| | ||| ||||| ||||| Sbjct 2896065 AAGCGTCCTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAGG 2896124 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||||| ||| || || | | || | ||| || | |||||| || Sbjct 2896125 GATACCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTCTCAAC 2896184 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||| | ||| | || || || || |||||||| |||||||| |||||| Sbjct 2896185 TTCCAAGGTAATTGTCTTTCCAGTGAGAGTTTTCACAAAAATTTGCATG 2896233 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | |||| |||||| || | || ||||| ||||| ||||||||||| | Sbjct 2883015 TCCACCACGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATCTGC 2883074 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||| | ||| || | |||||| || || | |||| | ||| ||||| ||||| Sbjct 2883075 AAGCGTCCTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAGG 2883134 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||||| ||| || || | | || | ||| || | |||||| || Sbjct 2883135 GATACCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTCTCAAC 2883194 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||| | ||| | || || || || ||||| || |||||||| |||||| Sbjct 2883195 TTCCAAGGTAATAGTCTTTCCAGTGAGAGTCTTCACAAAAATTTGCATG 2883243 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || |||||||| || ||| |||||| ||| || | ||| || ||| Sbjct 2882590 GTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATCCTCCAACTGCTTGCCA 2882649 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 || ||||||| | |||||| || ||||| || |||||||||||| ||| | | ||| || Sbjct 2882650 GCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCC-TGAATCTTTGCTTT 2882708 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | || | ||||| | ||||| || || | ||| | ||||| || |||| || Sbjct 2882709 CACATTGTCAATCGTGTCTGAGCTCTCAACCTCCAGGGTGATGGTTTTCCCAGTCAAGGT 2882768 Query 127096 TTTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 2882769 CTTCACAAATATCTGCAT 2882786 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || |||||||| || ||| |||||| ||| || | ||| || ||| Sbjct 2895580 GTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATCCTCCAACTGCTTACCA 2895639 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 || ||||||| | |||||| || ||||| || |||||||||||| ||| | | ||| || Sbjct 2895640 GCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCC-TGAATCTTTGCTTT 2895698 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | || | ||||| | ||||| || || | ||| | ||||| || |||| || Sbjct 2895699 CACATTGTCAATTGTGTCTGAGCTCTCAACCTCCAGGGTGATGGTTTTCCCAGTCAATGT 2895758 Query 127096 TTTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 2895759 CTTGACAAATATCTGCAT 2895776 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || ||||||||||| | | ||||| ||| ||||||||||| ||| Sbjct 2896492 GTGGACTCCTTCTGGATATTGTAATCAGCAAGGGTGCGGCCATCCTCTAGCTGTTTACCA 2896551 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | | ||| || || || || || || |||||||| ||| || ||| Sbjct 2896552 GCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCTTTG 2896611 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||||| | || || || |||| ||| | || ||||| || || ||| Sbjct 2896612 ACATTATCAATAGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTT 2896671 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 2896672 TTCACAAAGATCTGCAT 2896688 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||| |||||||| | || ||||| ||||| || || || || | | || | | Sbjct 2882800 CGCAAAACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCA 2882859 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| |||||||| | ||||| | ||| || || || || || |||||||| Sbjct 2882860 TCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTGGGATACCCTCCTTA 2882919 Query 127019 TCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCA 127076 || ||| || |||| | ||||| | | ||||| | ||||| || || | || | Sbjct 2882920 TCTTGGATCTTG-GCTTTAACGTTGT-CAATTGTGTCAGAGCTCTCCACCTCCAAAGTGA 2882977 Query 127077 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || |||| ||||| |||||||||||||| Sbjct 2882978 TGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 2883014 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || ||||||||||| | | ||||| ||| ||||||||||| ||| Sbjct 2883502 GTGGACTCCTTCTGGATATTGTAATCAGCAAGGGTGCGGCCATCCTCTAGCTGTTTACCA 2883561 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 || |||| | | ||| || || || || || || ||||||| | ||| | | || || Sbjct 2883562 GCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTTGT-CTTGAATCTTAGCTTT 2883620 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 || | || | ||||| | || || || |||| ||| | || ||||| || || || Sbjct 2883621 GACATTATCAATAGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGGT 2883680 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| ||||| |||||||| Sbjct 2883681 TTTCACAAAGATCTGCAT 2883698 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||| |||||||| | || ||||| ||||| || || || || | | || | | Sbjct 2895790 CGCAAGACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCA 2895849 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| |||||||| | ||||| | ||| || || || || || |||||||| Sbjct 2895850 TCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTGGGATACCCTCCTTA 2895909 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || ||| || |||| | || | ||||| | ||||| || || | || | Sbjct 2895910 TCTTGGATCTTGGCTTTGACATTGTCAATTGTGTCAGAGCTCTCCACCTCCAAAGTGATG 2895969 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || |||| ||||| |||||||||||||| Sbjct 2895970 GTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 2896004 >seq9 Length=38630433 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || ||||| ||||||||||| | | || || || || || || || || Sbjct 27803232 GTCGATTCCTTTTGGATATTGTAATCCGCAAGGGTTCGGCCGTCTTCAAGTTGCTTGCCG 27803173 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| ||||| ||||| ||||| ||||| |||||||| ||| || |||| Sbjct 27803172 GCGAAGATCAAGCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTG 27803113 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| |||||| | ||||| || |||| ||| | ||||||||||| || || Sbjct 27803112 ACGTTGT-CGATGGTGTCTGAGCTCTCCACCTCGAGGGTGATGGTTTTGCCGGTTAGGGT 27803054 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| || || |||||||| Sbjct 27803053 TTTCACGAAGATCTGCAT 27803036 Score = 122 bits (134), Expect = 8e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || |||||||| || ||| ||||| || || ||||| || ||| Sbjct 27803460 GTTGATTCCTTCTGGATATTGTAGTCCGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCA 27803401 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||||||||| || || ||||| |||||||||||||| ||| || ||| Sbjct 27803400 GCGAAGATCAATCGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTA 27803341 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||| | || |||||||| | || | || |||||||| || || Sbjct 27803340 ACGTTG-TCGATCGTGTCAGAGCTTTCGACTTCAAGAGTGATGGTCTTGCCGGTTAGGGT 27803282 Query 127096 TTTTACAAAAATCTGCATG 127114 ||| || || ||||||||| Sbjct 27803281 TTTGACGAAGATCTGCATG 27803263 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || |||||||| | | || | || || | ||| || || Sbjct 27803688 GTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTCCTGCCGTCCTCCAACTGCTTCCCG 27803629 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | ||||| | ||||||||| ||||| || || ||||| ||| |||||| |||| Sbjct 27803628 GCGAATATCAACCTCTGCTGATCCGGAGGGATCCCTTCCTTATCCTGGATTTTTGCCTTG 27803569 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | || |||| |||||| || || | || | ||||| ||||||| ||| Sbjct 27803568 ACGTTATCAATTGTATCCGAACTCTCTACCTCCAGAGTAATAGTTTTCCCGGTCAAGGTT 27803509 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || || |||||||||||| || Sbjct 27803508 TTAACGAAAATCTGCATGCCT 27803488 >seq1 Length=37323695 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| ||||| ||||||||||| || | ||||| || ||||| ||||| || || | Sbjct 11148464 CCACCACGTAAACGCAACACCAAGTGAAGGGTAGATTCCTTTTGGATATTATAGTCAGCG 11148405 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || ||||| || ||||| |||| | | ||||| || || || Sbjct 11148404 AGAGTTCTTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 11148345 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||| || ||| || ||| | | || | |||||| | |||||| || Sbjct 11148344 ATACCCTCCTTATCTTGGATCTTTGCCTTCACATTATCAATGGTGTCTGAACTCTCAACC 11148285 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||| ||||| || |||||||| ||||| Sbjct 11148284 TCCAATGTGATAGTCTTTCCGGTAAGAGTCTTCACAAAAATTTGCAT 11148238 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| |||||||| || ||||| | Sbjct 11148236 CCACCACGAAGACGGAGAACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAATCAGCA 11148177 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || || ||||||||||| | ||||| | ||||||||| || || Sbjct 11148176 AGTGTCCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAACCTCTGCTGATCTGGTGGG 11148117 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||| || ||| || || ||||| | || | ||||||| ||||| || Sbjct 11148116 ATACCCTCTTTATCCTGAATCTTAGCCTTGACATTGTCAATAGTGTCCGAGCTCTCTACC 11148057 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | |||||| || || ||||| || ||||| || |||||| Sbjct 11148056 TCCAAAGTGATCGTTTTACCTGTGAGAGTCTTGACAAAGATTTGCATG 11148009 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || ||||||||||| ||| | | ||||| || || ||||| || || Sbjct 32435718 GTGGATTCCTTCTGAATATTGTAGTCGGCTAAGGTGCGGCCGTCTTCGAGCTGCTTGCCG 32435777 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | || |||||||| || || || || ||||||||| ||| || ||| Sbjct 32435778 GCGAAGATGAGACGTTGCTGATCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCTTTG 32435837 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||||| || | ||| | || || || || || ||| Sbjct 32435838 ACATTGTCGATGGTGTCAGAGGATTCGACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTT 32435897 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 32435898 TTGACGAAGATCTGCAT 32435914 >seq6 Length=26303135 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||||||| ||| || || || || ||||| || ||| Sbjct 25054073 GTCGACTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCCGTCCTCGAGCTGCTTCCCA 25054014 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | | || || || || || || || ||||||||| ||| || ||| Sbjct 25054013 GCAAAGATAAGCCTTTGTTGGTCCGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTC 25053954 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| ||||| | |||||||||||||| ||| | || |||||||| || || Sbjct 25053953 ACGTTGT-CGATCGTGTCGGAACTCTCGACTTCGAGGGTGATTGTCTTGCCGGTGAGTGT 25053895 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 25053894 CTTAACGAAGATCTGCAT 25053877 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||| |||| || | || ||||| || |||||||||||||| || Sbjct 25054559 CCACCACGAAGGCGCAAGACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCC 25054500 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || | || || ||||| | ||||| | |||||||| || || Sbjct 25054499 AGAGTCCTTCCATCTTCCAATTGCTTCCCAGCAAATATCAACCTTTGCTGATCTGGTGGA 25054440 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||||| ||| | | ||| || | | || | ||| |||| ||||| || Sbjct 25054439 ATCCCTTCCTTGTCC-TGAATCTTTGCCTTAACATTATCAATGGTATCCGAGCTCTCCAC 25054381 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| || |||||||| || || ||||||||||| Sbjct 25054380 CTCCAAAGTAATGGTTTTCCCTGTCAGAGTCTTAACGAAAATCTGCAT 25054333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475498238239440