Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq5 154 3e-32 seq2 143 6e-29 seq1 138 3e-27 seq7 123 6e-23 seq6 120 7e-22 seq9 116 9e-21 >seq5 Length=39371879 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || || ||||||||||||||||||||||||||||||| || || ||||||||||| Sbjct 2688664 CGGAGCCTGAGGACAAGGTGGAGAGTCGACTCCTTTTGGATATTATAATCAGCCAAAGTA 2688723 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || |||||||| || |||||||||||||| ||||| ||||| ||| || ||| Sbjct 2688724 CGGCCGTCCTCCAGCTGTTTCCCGGCGAAGATGAGCCGCTGTTGGTCGGGAGGGATGCCT 2688783 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||| || || ||| ||| |||| ||||| | | || || || | Sbjct 2688784 TCTTTGTCCTGGATTTTGGCCTTGACGTTGTCGATCGTGTCGGAACTCTCGACTTCGAGG 2688843 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || | |||||| ||||| ||||| Sbjct 2688844 GTGATGGTTTTGCCGGTCAAAGTTTTGACAAAGATTTG 2688881 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || ||||| || || | ||| || ||||| |||||||| ||||| Sbjct 2688217 AGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTATAATCAGCTAAAGTCCTCCCATCC 2688276 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| ||||| ||||| ||||| || | ||||| || || |||||||| ||| Sbjct 2688277 TCCAATTGCTTCCCGGCAAAGATAAGCCTTTGCTGATCTGGGGGGATTCCTTCCTTATCC 2688336 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||||||| ||| || |||| || || | |||| || ||||| ||||| || Sbjct 2688337 TGAATCTTTGCCTTGACATTATCGATTGTATCCGAACTTTCCACCTCCAAGGTGATTGTT 2688396 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || || |||||||| || Sbjct 2688397 TTTCCAGTCAAGGTCTTGACAAAAATCTG 2688425 Score = 122 bits (134), Expect = 2e-22 Identities = 159/219 (73%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| |||||||||||||||||||| |||| |||||| || ||||| || Sbjct 2689120 CGAAGACGGAGGACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGTA 2689179 Query 199469 CTTCCATCTTCCAGCTGCTTTCC-GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | || ||||| ||||| || || ||||||||||| | |||||||| || || || Sbjct 2689180 CGGCCGTCTTCGAGCTGTTTGCCACGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCCC 2689239 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| || || ||||| ||| ||| |||| |||||| | | || || || | Sbjct 2689240 TTCCTTGTCTTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACCTCGAG 2689299 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || |||||||| || || || Sbjct 2689300 AGTTATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTG 2689338 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| ||||||||||| |||||||| |||| ||| || || ||||| || Sbjct 2688892 CGAAGACGGAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTATAATCCGCCAAGGTA 2688951 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| ||||| || |||||||||||||| | |||||||| || || ||| Sbjct 2688952 CGACCGTCTTCGAGCTGTTTCCCGGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCCCT 2689011 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| ||| ||| |||| ||||| | | || || || | Sbjct 2689012 TCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAACTCTCCACTTCGAGG 2689071 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| || | ||||| || || || || Sbjct 2689072 GTGATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTG 2689109 Score = 107 bits (118), Expect = 5e-18 Identities = 79/91 (87%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 199440 CCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 ||||| |||| ||||||||||||||| |||| |||||||| ||||| |||||||||||| Sbjct 6357257 CCTTTCTGGATGTTGTAGTCAGCCAAGGTCCGGCCATCTTCGAGCTGTTTTCCGGCGAAG 6357316 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529 ||||||||||| |||||||| ||||||| Sbjct 6357317 ATGAGACGCTGTTGGTCCGGTGGTATTCCTT 6357347 Score = 96.9 bits (106), Expect = 8e-15 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 |||||||| ||||| ||||| ||||| ||||| |||||||| || ||||| ||| | ||| Sbjct 2688302 CTTATCTTTGCCGGGAAGCAATTGGAGGATGGGAGGACTTTAGCTGATTATAACATTCAG 2688243 Query 200995 AAAGAGTCTACTCTTCACCTTGT 201017 ||||||||||| || |||||||| Sbjct 2688242 AAAGAGTCTACCCTCCACCTTGT 2688220 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 |||||||| || |||||| | || || || ||||| ||||| ||||||||| | || || Sbjct 2688527 ATCTTCGCTGGGAAGCAGCTTGAGGACGGGAGGACCTTGGCTGATTACAACATACAAAAG 2688468 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || || || ||||| ||||||||||| ||||| Sbjct 2688467 GAATCAACCCTTCATCTTGTTTTGAGGCTTCG 2688436 >seq2 Length=41236440 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || ||||| || |||||||| || | ||| ||||| || | || | || ||| Sbjct 32406497 AGGACCAGATGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCTAGGGTACGGCCGTCT 32406556 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||||||||| || ||||||||| || ||||| || Sbjct 32406557 TCAAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCCGGAGGGATGCCTTCCTTGTCT 32406616 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | ||| || ||||| || || ||| Sbjct 32406617 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCGACCTCCAAGGTTATGGTC 32406676 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || |||||||| || || || Sbjct 32406677 TTACCCGTTAGGGTTTTCACGAAGATCTG 32406705 >seq1 Length=37323695 Score = 138 bits (152), Expect = 3e-27 Identities = 151/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || || || |||||||||| || |||||||| | ||| ||||||||||| ||||| Sbjct 11148441 GTGAAGGGTAGATTCCTTTTGGATATTATAGTCAGCGAGAGTTCTTCCATCTTCAAGCTG 11148382 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || |||||||| | |||||||| || || || || || || ||||| Sbjct 11148381 CTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATACCCTCCTTATCTTGGATCTT 11148322 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 | |||||| || | |||||||| | || || ||||| ||||| ||||| || || Sbjct 11148321 TGCCTTCACATTATCAATGGTGTCTGAACTCTCAACCTCCAATGTGATAGTCTTTCCGGT 11148262 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 ||||| |||||||||||||| Sbjct 11148261 AAGAGTCTTCACAAAAATTTG 11148241 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| || || ||||||||||| | ||| || ||||| | ||| Sbjct 11148230 CGAAGACGGAGAACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAATCAGCAAGTGTC 11148171 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 ||||||||||| || || ||||| || || || | | |||||| || || || || Sbjct 11148170 CTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAACCTCTGCTGATCTGGTGGGATACCC 11148111 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||||||||| ||| || || | ||||| | | ||||| ||||| Sbjct 11148110 TCTTTATCCTGAATCTTAGCCTTGACATTGTCAATAGTGTCCGAGCTCTCTACCTCCAAA 11148051 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| ||||| |||||||| || ||||| ||||| Sbjct 11148050 GTGATCGTTTTACCTGTGAGAGTCTTGACAAAGATTTG 11148013 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||||| || | || || ||||| |||| ||||||||| |||| ||| Sbjct 11148686 CGAAGGCGAAGAACAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGAGTT 11148627 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || ||||| ||||||||||| || || || || | | ||||||||| ||| || || Sbjct 11148626 CTCCCATCCTCCAGCTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGGATCCCC 11148567 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| |||||| |||||| || | |||||||| | || || |||||| Sbjct 11148566 TCCTTGTCCTGGATCTTTGCCTTCACATTATCAATGGTGTCTGAGCTATCAACCTCCAAC 11148507 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || | || |||||||| || || Sbjct 11148506 GTTATTGTCTTTCCAGTCAAGGTCTTCACAAATATCTG 11148469 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || || || ||||| || | |||||||| || || || | || ||| Sbjct 32435703 AGGACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAGTCGGCTAAGGTGCGGCCGTCT 32435762 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||||||||| ||||| ||||| |||||||| ||| Sbjct 32435763 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGATCCGGTGGGATTCCTTCCTTGTCC 32435822 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || || |||| |||||| | | ||| || || | || || ||| Sbjct 32435823 TGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGGATTCGACCTCTAGGGTTATGGTC 32435882 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || ||||| || || || || Sbjct 32435883 TTCCCCGTTAGGGTTTTGACGAAGATCTG 32435911 Score = 91.5 bits (100), Expect = 3e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 ||||| || |||||||| |||| || |||||||| | || | |||||||| ||||| Sbjct 11147756 TGGAGGGTGGACTCCTTCTGGATATTATAGTCAGCTAGGGTTCGACCATCTTCAAGCTGT 11147697 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || || || || || | |||||||| ||| |||||||| || || ||||| Sbjct 11147696 TTGCCAGCAAAAATAAGCCTTTGCTGGTCAGGAGGGATTCCTTCCTTGTCTTGGATCTTA 11147637 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || || | || || | | || || || | ||||| ||||| || || Sbjct 11147636 GCCTTGACATTGTCAATAGTATCAGAGCTCTCAACCTCAAGGGTGATGGTCTTGCCTGTT 11147577 Query 199607 AGAGTTTTCACAAAAATTTG 199626 || ||||||||||| ||||| Sbjct 11147576 AGGGTTTTCACAAAGATTTG 11147557 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 ||| |||| |||||||| || || ||||||||||||| ||| || ||||| | || | Sbjct 8434231 AAGCCTCAAAACAAGGTGAAGTGTGGACTCCTTTTGGATGTTATAATCAGCAAGCGTTCG 8434172 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 ||||||||||| ||||| || || || || | | |||||| || ||| || ||||| Sbjct 8434171 GCCATCTTCCAGTTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGAGGGATGCCTTC 8434112 Query 199531 TCGCTCCTGAAT 199542 | ||||| || Sbjct 8434111 TTTATCCTGGAT 8434100 >seq7 Length=21614486 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||||| || |||||||| || | ||| ||||| || | || Sbjct 2896240 CGAAGCCGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCAAGGGTT 2896299 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || |||||||| ||||| |||||||| || || | | |||||||||||| || || Sbjct 2896300 CTGCCATCTTCAAGCTGTTTTCCGGCAAAAATTAACCTCTGCTGGTCCGGTGGGATACCC 2896359 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| |||||| |||| ||| || | | || || ||||| Sbjct 2896360 TCCTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCACCTCCAAA 2896419 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || ||||||||||||||||| || || Sbjct 2896420 GTGATGGTTTTCCCAGTGAGAGTTTTCACAAATATCTG 2896457 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || || || |||||||| |||| ||||||||||||| ||| | ||||| Sbjct 2882575 AGGACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATCC 2882634 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| || || ||||| | | ||||||||| ||| ||| || || ||| Sbjct 2882635 TCCAACTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCC 2882694 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||||||| ||||| || | ||||||| | || || |||| ||||| || Sbjct 2882695 TGAATCTTTGCTTTCACATTGTCAATCGTGTCTGAGCTCTCAACCTCCAGGGTGATGGTT 2882754 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || |||||||| || || Sbjct 2882755 TTCCCAGTCAAGGTCTTCACAAATATCTG 2882783 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || | |||||| || ||||||||||||| ||||| || || | ||| Sbjct 2896012 CGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATCTGCAAGCGTC 2896071 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || ||||| |||| ||| || ||||| || || || | ||| || || ||| || ||| Sbjct 2896072 CTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAGGGATACCT 2896131 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| || || || | ||| || | | || || ||||| Sbjct 2896132 TCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTCTCAACTTCCAAG 2896191 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||||||||||||||||||||| Sbjct 2896192 GTAATTGTCTTTCCAGTGAGAGTTTTCACAAAAATTTG 2896229 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || || || |||||||| |||| ||||||||||||| ||| | ||||| Sbjct 2895565 AGGACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATCC 2895624 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| || || ||||| | | ||||||||| ||| ||| || || ||| Sbjct 2895625 TCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCC 2895684 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||||||| ||||| || | ||||||| | || || |||| ||||| || Sbjct 2895685 TGAATCTTTGCTTTCACATTGTCAATTGTGTCTGAGCTCTCAACCTCCAGGGTGATGGTT 2895744 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || || ||||| || || Sbjct 2895745 TTCCCAGTCAATGTCTTGACAAATATCTG 2895773 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || | |||||| || ||||||||||||| ||||| || || | ||| Sbjct 2883022 CGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATCTGCAAGCGTC 2883081 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || ||||| |||| ||| || ||||| || || || | ||| || || ||| || ||| Sbjct 2883082 CTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAGGGATACCT 2883141 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| || || || | ||| || | | || || ||||| Sbjct 2883142 TCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTCTCAACTTCCAAG 2883201 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || |||||||| |||||||||||||| Sbjct 2883202 GTAATAGTCTTTCCAGTGAGAGTCTTCACAAAAATTTG 2883239 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || |||| || || | ||||| || |||||||| || | ||| ||||| || | || Sbjct 2883250 CGGAGTCGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCAAGGGTT 2883309 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || |||||||| ||||| ||||| || || || | | ||||||||| || || || Sbjct 2883310 CTGCCATCTTCAAGCTGTTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGGATACCC 2883369 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| |||||| |||| ||| || | | || || ||||| Sbjct 2883370 TCCTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCACCTCCAAA 2883429 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || ||||||||||||||||| || || Sbjct 2883430 GTGATGGTTTTCCCAGTGAGAGTTTTCACAAATATCTG 2883467 Score = 102 bits (112), Expect = 2e-16 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 ||||| || ||||||||||| || |||||||| |||| ||||| ||||| | || | Sbjct 2883480 AAGTCGAAGAACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCAGCAAGGGTGCG 2883539 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 ||||| || ||||| || || || ||||| || | ||| ||||| || || ||||| Sbjct 2883540 GCCATCCTCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCTTC 2883599 Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 || |||||||| || || || | ||||| | |||| || || | || Sbjct 2883600 CTTGTCTTGAATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCCACCTCGAGGGT 2883659 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| || || || ||||||||||| || || Sbjct 2883660 GATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTG 2883695 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 || ||| | || ||| | || || || ||||||||||||| ||| ||||| || | || Sbjct 2895783 TCTAAGGCGCAAGACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCAAGTGT 2895842 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 ||| |||||||| ||||||||||| || || || | | ||| ||||| || || || Sbjct 2895843 CCTCCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTGGGATACC 2895902 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || || || ||||| || || || | ||||| | | || || ||||| Sbjct 2895903 CTCCTTATCTTGGATCTTGGCTTTGACATTGTCAATTGTGTCAGAGCTCTCCACCTCCAA 2895962 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| || | |||||||||||||| || Sbjct 2895963 AGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTG 2896001 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || |||||||| |||| ||||| ||||| | || | ||||| Sbjct 2896477 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCAGCAAGGGTGCGGCCATCC 2896536 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| || || || ||||| || | ||| ||||| || || ||||| || Sbjct 2896537 TCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCT 2896596 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || || || | ||||| | |||| || || | ||||| ||| Sbjct 2896597 TGGATCTTGGCTTTGACATTATCAATAGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTC 2896656 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || ||||||||||| || || Sbjct 2896657 TTGCCAGTAAGGGTTTTCACAAAGATCTG 2896685 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || ||||||||||||| ||| ||||| || | ||||| ||||| || |||||| Sbjct 2882812 TGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCATCCTCAAGCTGC 2882871 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||| || || || | | ||| ||||| || || || || || || ||||| Sbjct 2882872 TTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTGGGATACCCTCCTTATCTTGGATCTTG 2882931 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 || ||| || | ||||| | | || || ||||| ||||| || ||||| || Sbjct 2882932 GCTTTAACGTTGTCAATTGTGTCAGAGCTCTCCACCTCCAAAGTGATGGTTTTACCAGTC 2882991 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | |||||||||||||| || Sbjct 2882992 AAGGTTTTCACAAAAATCTG 2883011 >seq6 Length=26303135 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||||||||||||||| |||| |||||| || ||||| || | || || Sbjct 25054088 AGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCCGTCC 25054029 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| || | || |||||||| || ||||| ||| Sbjct 25054028 TCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATCCCTTCCTTGTCC 25053969 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| ||||| | | || || || | ||||| ||| Sbjct 25053968 TGGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAACTCTCGACTTCGAGGGTGATTGTC 25053909 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 25053908 TTGCCGGTGAGTGTCTTAACGAAGATCTG 25053880 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || |||| || | || || |||||||| || || | ||| || ||||||||||| Sbjct 25054325 CGGAGCCTCAAAACCAAATGAAGTGTCGACTCTTTCTGAATGTTATAATCAGCCAAAGTT 25054266 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| || || ||||| || | |||||||| || |||||| Sbjct 25054265 CGACCGTCCTCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGCGGGATTCCT 25054206 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||||||| |||| |||||| | |||| || |||| Sbjct 25054205 TCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCGACTTCCAGG 25054146 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||||||||| || || || || || || || Sbjct 25054145 GTTATCGTCTTACCCGTCAGGGTCTTGACGAAGATCTG 25054108 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||| ||||| || || |||||||| || | ||||| ||||||| |||| Sbjct 25054553 CGAAGGCGCAAGACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCCAGAGTC 25054494 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 ||||||||||||| ||||| || || || || | | ||||| || || ||| ||| Sbjct 25054493 CTTCCATCTTCCAATTGCTTCCCAGCAAATATCAACCTTTGCTGATCTGGTGGAATCCCT 25054434 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || |||||||||||| ||| || || | ||| || | | || || ||||| Sbjct 25054433 TCCTTGTCCTGAATCTTTGCCTTAACATTATCAATGGTATCCGAGCTCTCCACCTCCAAA 25054374 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||| || || ||||| || Sbjct 25054373 GTAATGGTTTTCCCTGTCAGAGTCTTAACGAAAATCTG 25054336 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || || || || ||||| |||||||||||||||||| |||| |||||||| | ||||| Sbjct 25054462 ATATTTGCTGGGAAGCAATTGGAAGATGGAAGGACTCTGGCTGATTACAATATTCAGAAG 25054521 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 ||||| || |||||||| || ||| | ||||| Sbjct 25054522 GAGTCCACCCTTCACCTGGTCTTGCGCCTTCG 25054553 >seq9 Length=38630433 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||||||||| |||||||||| ||||| || || | || | || ||| Sbjct 27803247 AGTACCAGGTGGAGAGTCGATTCCTTTTGGATATTGTAATCCGCAAGGGTTCGGCCGTCT 27803188 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| ||||||||||| | ||||| || || ||| ||| ||||| || Sbjct 27803187 TCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCT 27803128 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||||| | || || || | ||||| || Sbjct 27803127 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCGAGGGTGATGGTT 27803068 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || |||||||| || || || Sbjct 27803067 TTGCCGGTTAGGGTTTTCACGAAGATCTG 27803039 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||||||||| || || |||||||| |||| |||||| || || | ||| Sbjct 27803940 CGAAGCCGAAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCTGCAAGAGTA 27803881 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| |||| ||||| || ||||| ||||| | |||||| || || ||| || Sbjct 27803880 CGCCCATCCTCCAATTGCTTCCCAGCGAAAATGAGCCTCTGCTGATCAGGTGGAATCCCC 27803821 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || ||||| || ||||||| |||| || || | | || || || | | Sbjct 27803820 TCCTTATCTTGAATTTTCGCCTTCACGTTATCGATTGTATCAGAACTCTCCACCTCAAGC 27803761 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || || ||||| || || || Sbjct 27803760 GTAATCGTCTTTCCAGTCAGCGTCTTCACGAAGATCTG 27803723 Score = 95.1 bits (104), Expect = 3e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || |||||||| ||||||||||| || || ||||| | || ||||||||| ||||||| Sbjct 27803621 ATATTCGCCGGGAAGCAGTTGGAGGACGGCAGGACCCTTGCGGATTACAACATCCAGAAG 27803680 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 ||||| |||||||||||||| |||| || || Sbjct 27803681 GAGTCCACTCTTCACCTTGTGCTGAGGCTCCG 27803712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178915089773877