Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq4 255 6e-63 seq5 127 2e-24 seq9 123 2e-23 seq7 109 5e-19 seq1 105 7e-18 seq6 98.7 1e-15 >seq4 Length=31929104 Score = 255 bits (282), Expect = 6e-63 Identities = 607/900 (67%), Gaps = 27/900 (3%) Strand=Plus/Minus Query 132603 TTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAG 132662 ||| || || || || || ||||||| || ||||||||||| || | ||| ||||| || Sbjct 2302343 TTTCTGGTACTCTCCAACTCTTTTCTCGAAGAAATTAGTTTTACCTTGCAACGAAATCAG 2302284 Query 132663 CGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTG--GTGCCGATCAGGTCGACG 132720 ||| |||| || ||||| || ||||| ||| || || | || | Sbjct 2302283 TTCCATCCAATCAAAAGGGTTAGCCACATTGTACATCTTCCCGTACCCCAACGCTC--CC 2302226 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 | || || || || |||||||||||||| || ||| || | || | ||||| | Sbjct 2302225 AACAACCGATCTGCGACGAACTCGATGTACTGACTCATCAGCTCTCCGTTCA-TCCCAAC 2302167 Query 132781 AGACGCAC-CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839 | || | |||||| || || | ||| ||| || | || ||||| | || Sbjct 2302166 CAATGCGCACGGCAGAGCATCACATACAAACTCCCTCTCTATATCCACTGCGTCCCTCAC 2302107 Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA--ACATCAAGCAA 132897 | | || |||||| | ||||| || ||| ||| | | || ||| ||||||| Sbjct 2302106 TAACCCTCTCACGCGCTCTTCGCTCAGCT-TTG-ACCGGAGGAGGGAGTACAGCAAGCAA 2302049 Query 132898 GCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCG 132957 || || |||||||| | || || || | || || | ||||| |||||| || || Sbjct 2302048 GCGAAATCGCAATGGAGACCTTCATCTCGTGAGATTAACTCGTTCGAGAAAGTTAATCCA 2301989 Query 132958 GGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACG 133017 ||||| | ||||| ||||| | ||||||||| ||| |||||| || || ||||| | Sbjct 2301988 GGCATTAACCCGCGCTTTTTTAACCAAAATATAGCGCAGAAACTTCCAGAGAAGAAAATC 2301929 Query 133018 CCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATC 133077 || || ||| || ||||| | || || ||| |||| || ||| | | ||||| Sbjct 2301928 CCTTCCACGCAAGCAAAAGCGATTAGCCGTTCGGCGAAAGT---TTCCGAACCGTCGATC 2301872 Query 133078 CAGCGCAGCGCCCATTCGGCCTTTTCTTTG--ACGCACGGCATCGTTTCGATGGCGTTCA 133135 || || |||||| ||||| |||||| | || ||||||| ||||||| ||||| | Sbjct 2301871 CATTTCAACGCCCACTCGGC--TTTCTTAGCCACACACGGCACTGTTTCGACGGCGTGGA 2301814 Query 133136 ACAAACGGAGTTTCTCTTCCGAGGAACGC---ACGTAGGTGTCGATGAGGGTCGAATACA 133192 | | ||| |||| ||| ||| | | ||| || || | |||| ||||| Sbjct 2301813 AGAGCCGG---TTCTTTTCGTTGGAGTCCTTGATGTAAGTTTCAAGGAGGAGACTATACA 2301757 Query 133193 TTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTA-AAAGCACCGCGCCTCGACC 133251 | || ||||| | || || ||||||||||| ||||| || || ||| || |||||| | Sbjct 2301756 TCTCGGAGTGGATATTTTCGATGGCGATTTGGAAGCCATAGAACGCA-CGAGCCTCGGCG 2301698 Query 133252 ACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCG 133311 | || ||||| | ||| || || | ||||||||| ||||||||| ||| ||| Sbjct 2301697 ATTTGGACTTCCTTCATGAACCGAACGGCGAGATTTTCGAGGACGATGCCATCGGAGGCT 2301638 Query 133312 GCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG-CTCCCA 133370 ||||| ||||| || ||||| ||||||| ||||| ||| ||| | ||| | ||||| Sbjct 2301637 GCGAAGAAGGCGAGGACGTGAGTGATGAAGTGGCGTTCGCCATCGGT-AAGAGTTTCCCA 2301579 Query 133371 GTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTT 133430 || ||| ||| || || || || |||||| |||||||||| || || |||||||| Sbjct 2301578 GTGGCGTAGATCCGACGAGAGATCGACTTCCTCGGCGGTCCAAAAGGAGGCTTCGGCTTT 2301519 Query 133431 TTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTT 133490 |||||||| ||| | |||| ||||| || || || || ||||||| ||||| Sbjct 2301518 CTTGTACATTTCCCATACTTCCGGGTATTGGATCGGGAACATGCAAAACCGGTCCGGGTT 2301459 >seq5 Length=39371879 Score = 127 bits (140), Expect = 2e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| | || ||||||||||||||| |||| |||||| || Sbjct 2688884 ATGCAAATCTTTGTCAAAACTTTGACCGGCAAAACCATCACCCTCGAAGTCGAGAGTTCC 2688825 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | ||||||| |||||||| || || || ||||||| Sbjct 2688824 GACACGATCGACAACG-TCAAGGCCAAAATCCAGGACAAAGAAGGCATCCCTCCCGACCA 2688766 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||||||||| | ||| || ||||||||||| |||| || || | || || || Sbjct 2688765 ACAGCGGCTCATCTTCGCCGGGAAACAGCTGGAGGACGGCCGTACTTTGGCTGATTATAA 2688706 Query 38423 CATCCAAAAGGAAGCGACGCTGCA 38446 ||||||||||| |||| || || Sbjct 2688705 TATCCAAAAGGAGTCGACTCTCCA 2688682 Score = 123 bits (136), Expect = 2e-23 Identities = 173/239 (72%), Gaps = 3/239 (1%) Strand=Plus/Minus Query 38234 CTTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGT 38293 |||| | || ||||| || ||||| ||||| || || ||||| ||||| || |||| || Sbjct 2689351 CTTTTAGAAGATGCAGATCTTCGTGAAAACCCTGACCGGCAAGACCATAACTCTCGAGGT 2689292 Query 38294 CGAGGCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTC 38352 |||| |||||| | | | |||| |||| | || |||| ||||| || || || | Sbjct 2689291 CGAGAGTTCCGACACCATCGACAACG-TTAAGGCCAAGATCCAAGACAAGGAAGGGATCC 2689233 Query 38353 CCGCCGACCAACAGCGGCTCATTTACGCG-GGCAAACAGCTGGACGACGAGCGCACCCTC 38411 | ||||||| || ||||||| | |||| ||||||||||| || |||| || ||| | Sbjct 2689232 CACCCGACCAGCAAAGGCTCATCTTCGCGTGGCAAACAGCTCGAAGACGGCCGTACCTTG 2689173 Query 38412 AACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || ||||||||||| ||||| |||| || || |||| || ||| | | ||||| Sbjct 2689172 GCGGATTACAACATCCAGAAGGAGTCGACTCTCCACCTGGTCCTCCGTCTTCGTGGCGG 2689114 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| | || || |||||||||||| |||| || ||| || Sbjct 2689112 ATGCAGATCTTCGTCAAAACCTTGACCGGTAAAACCATCACCCTCGAAGTGGAGAGTTCC 2689053 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| || || || || ||||||| Sbjct 2689052 GACACGATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCACCCGACCA 2688994 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || ||||||| | ||| || |||||||| || |||| || ||| | || || || Sbjct 2688993 GCAAAGGCTCATCTTCGCCGGGAAACAGCTCGAAGACGGTCGTACCTTGGCGGATTATAA 2688934 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || || || |||| || ||| | | ||||| Sbjct 2688933 CATCCAGAAGGAGTCAACTCTCCACCTGGTCCTCCGTCTTCGTGGCGG 2688886 >seq9 Length=38630433 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| || || ||||||||||||||| |||| || ||| | Sbjct 27803033 AAGATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACCATCACCCTCGAGGTGGAGAGC 27803092 Query 38301 ACCGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | |||| | || | || |||| ||||| || || ||||| | || Sbjct 27803093 TCAGACACCATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCTGA 27803151 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 |||||||| | || | ||| ||||| || || || |||| || ||||| || || Sbjct 27803152 TCAACAGCGCTTGATCTTCGCCGGCAAGCAACTTGAAGACGGCCGAACCCTTGCGGATTA 27803211 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||| |||||||||||| |||| || || |||| || ||| | | |||||| Sbjct 27803212 CAATATCCAAAAGGAATCGACTCTCCACCTGGTACTCCGTCTCCGTGGCGGC 27803263 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || ||||| |||||||| | || ||||| | | Sbjct 27803264 ATGCAGATCTTCGTCAAAACCCTAACCGGCAAGACCATCACTCTTGAAGTCGAAAGCTCT 27803323 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| | || |||| ||||| ||||| || || | ||||| Sbjct 27803324 GACACGATCGACAACG-TTAAGGCCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCA 27803382 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | ||| ||||| ||||| || |||| |||||||| |||||||| Sbjct 27803383 ACAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCGGACTACAA 27803442 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||||| |||||| | || || || | ||||| Sbjct 27803443 TATCCAGAAGGAATCAACCCTTCACCTTGTGCT 27803475 >seq7 Length=21614486 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || ||||| | || || ||||||||||| | || || ||| | | Sbjct 2883015 AATGCAGATTTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAGGTGGAGAGCTC 2882956 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| |||||| || |||| || || ||||| || || | |||| Sbjct 2882955 TGACACAATTGACAACG-TTAAAGCCAAGATCCAAGATAAGGAGGGTATCCCACCTGACC 2882897 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||| || | |||| || || || ||||| || || | | | || || ||||| | Sbjct 2882896 AACAGAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGGAGGACACTTGCAGACTATA 2882837 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || ||||||||||| |||| ||||||| || Sbjct 2882836 ACATCCAAAAGGAGTCAACCCTGCATTTGGTTTTGCGCCTGAGAGGAGG 2882788 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || ||||| | || || ||||||||||| | || || ||| | | Sbjct 2896005 AATGCAGATTTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAGGTGGAGAGCTC 2895946 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | |||| || |||| || || ||||| || || | ||||| Sbjct 2895945 TGACACAATTGACAATGTCAAAGCCAAGATCCAAGATAAGGAGGGTATCCCACCTGACCA 2895886 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| || | |||| || || || ||||| || || | | | || || ||||| || Sbjct 2895885 ACAGAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGGAGGACACTTGCAGACTATAA 2895826 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||| | || ||||||||||| |||| | ||||| || Sbjct 2895825 CATCCAAAAGGAGTCAACCCTGCATTTGGTCTTGCGCCTTAGAGGAGG 2895778 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| ||||| || || || || ||| | || || ||| | Sbjct 2896232 ATGCAAATTTTTGTGAAAACTCTCACTGGAAAGACAATTACCTTGGAAGTTGAGAGTTCT 2896173 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | |||| || |||| ||||| || || || || | || ||| Sbjct 2896172 GATACCATTGACAATGTAAAAGCTAAGATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 2896113 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || ||||||||| |||| || | | | || || || ||||| Sbjct 2896112 CAGAGGCTGATATTTGCCGGCAAACAGTTGGAGGATGGGAGGACGCTTGCAGATTACAAT 2896053 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| | || || || |||||||||||| || | || || Sbjct 2896052 ATCCAAAAGGAGTCAACCCTCCACTTGGTGCTGCGTCTGCGTGGTGG 2896006 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || || || | || || |||||||||||| | || || ||| | | Sbjct 2882786 ATGCAGATATTTGTGAAGACCTTGACTGGGAAAACCATCACCCTGGAGGTTGAGAGCTCA 2882727 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | | |||| ||| || | ||||| ||||| ||||| | ||||| Sbjct 2882726 GACACGATTGACAATG-TGAAAGCAAAGATTCAGGACAAGGAGGGGATTCCTCCAGACCA 2882668 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || ||||| ||| |||| || | ||||| || |||||||| Sbjct 2882667 GCAGAGGTTGATCTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACTCTGGCTGACTACAA 2882608 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| | || || ||| | || || || Sbjct 2882607 TATCCAGAAGGAGTCCACCCTTCATCTTGTCCTTCG 2882572 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| || || || || ||| | || || ||| | Sbjct 2883242 ATGCAAATTTTTGTGAAGACTCTCACTGGAAAGACTATTACCTTGGAAGTTGAGAGTTCT 2883183 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | |||| || |||| ||||| || || || || | || ||| Sbjct 2883182 GATACCATTGACAATGTAAAAGCTAAGATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 2883123 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || ||||||||| |||| || | | | || || || ||||| Sbjct 2883122 CAGAGGCTGATATTTGCCGGCAAACAGTTGGAGGATGGGAGGACGCTTGCAGATTACAAT 2883063 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| | || || || |||||||||||| || | || || Sbjct 2883062 ATCCAAAAGGAGTCAACCCTCCACTTGGTGCTGCGTCTGCGTGGTGG 2883016 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || ||||| ||||| || ||||||||||| | || || ||| | Sbjct 2883470 ATGCAGATATTTGTGAAAACTCTCACTGGGAAAACCATCACTTTGGAGGTGGAGAGTTCG 2883411 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | || || | ||||| ||||| || || | ||||| Sbjct 2883410 GATACCATCGATAATGTGAAGGCCAAGATTCAGGACAAGGAGGGTATCCCACCAGACCAG 2883351 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | |||| || || |||||||| || || | | ||||| ||||| ||| Sbjct 2883350 CAGAGGTTAATTTTTGCTGGAAAACAGCTTGAAGATGGCAGAACCCTTGCAGACTATAAC 2883291 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || || ||||| | || || ||||||||| |||| Sbjct 2883290 ATTCAGAAGGAGTCAACCCTCCATTTGGTGTTGCG 2883256 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || ||||| ||||| || ||||||||||| | || || ||| | Sbjct 2896460 ATGCAGATATTTGTGAAAACTCTCACTGGGAAAACCATCACTTTGGAGGTGGAGAGTTCG 2896401 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | || || | ||||| ||||| || || | ||||| Sbjct 2896400 GATACCATCGATAATGTGAAGGCCAAGATTCAGGACAAGGAGGGTATCCCACCGGACCAG 2896341 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | |||| || || |||||||| || || | | ||||| ||||| ||| Sbjct 2896340 CAGAGGTTAATTTTTGCCGGAAAACAGCTTGAAGATGGCAGAACCCTTGCAGACTATAAC 2896281 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || || ||||| | || || ||||||||| |||| Sbjct 2896280 ATTCAGAAGGAGTCAACCCTCCATTTGGTGTTGCG 2896246 Score = 82.4 bits (90), Expect = 8e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || || || | || || |||||||||||| | || || ||| | | Sbjct 2895776 ATGCAGATATTTGTCAAGACATTGACTGGGAAAACCATCACCCTGGAGGTTGAGAGCTCA 2895717 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| ||| || | ||||| ||||| ||||| | ||||| Sbjct 2895716 GACACAATTGACAATGTGAAAGCAAAGATTCAGGACAAGGAGGGGATTCCTCCAGACCAG 2895657 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | || || || ||| |||| || | ||||| || |||||||| Sbjct 2895656 CAGAGGTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTCGCACTCTGGCTGACTACAAT 2895597 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| | || || ||| | || || || Sbjct 2895596 ATCCAGAAGGAGTCCACCCTTCATCTTGTCCTTCG 2895562 >seq1 Length=37323695 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| || || || |||||| | || || ||| | | Sbjct 11147782 ATGCAAATCTTTGTCAAGACACTCACAGGAAAGACTATCACCTTGGAGGTTGAGAGCTCT 11147841 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | |||||| || |||| ||||| || ||||| || | || ||| Sbjct 11147842 GATACTATTGACAATGTTAAAGCGAAGATCCAAGACAAGGAAGGAATCCCTCCTGATCAA 11147901 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || | || || | || ||||||||||| || |||| |||||||| ||||| || Sbjct 11147902 CAAAGACTTATCTTTGCTGGCAAACAGCTTGAAGACGGTCGCACCCTAGCTGACTATAAT 11147961 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| ||||| | || || ||||||||||| ||| | |||| ||| Sbjct 11147962 ATCCAGAAGGAGTCCACCCTTCATTTGGTGCTTCGTCTTCGAGGTGGC 11148009 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| || || ||||| ||||||||| | || || ||| | | Sbjct 11147554 ATGCAAATCTTTGTGAAAACCCTAACAGGCAAGACCATCACCCTTGAGGTTGAGAGCTCT 11147613 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | || | || |||| ||||| || ||||| || | ||||| Sbjct 11147614 GATACTATTGACAATGTCAAGGCTAAGATCCAAGACAAGGAAGGAATCCCTCCTGACCAG 11147673 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || |||| |||| || ||||||||||| || || | || ||||| ||||| || Sbjct 11147674 CAAAGGCTTATTTTTGCTGGCAAACAGCTTGAAGATGGTCGAACCCTAGCTGACTATAAT 11147733 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| | || || ||||||||||| ||| Sbjct 11147734 ATCCAGAAGGAGTCCACCCTCCATTTGGTGCTTCGT 11147769 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || || || || ||||| | || || ||| | Sbjct 11148238 ATGCAAATTTTTGTGAAGACTCTTACCGGAAAGACTATCACATTGGAGGTTGAGAGTTCA 11148297 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | ||| |||| || || ||||| || || | ||||| Sbjct 11148298 GACACCATTGATAATGTGAAGGCAAAGATCCAAGATAAGGAGGGTATCCCACCAGACCAG 11148357 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || ||||||| | || ||||| ||||| || || | | || ||| ||||| || Sbjct 11148358 CAAAGGCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGAAGAACTCTCGCTGACTATAAT 11148417 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461 |||||||||||| | || || || |||||| ||||||| Sbjct 11148418 ATCCAAAAGGAATCTACCCTTCACTTGGTGTTGCGTTT 11148455 >seq6 Length=26303135 Score = 98.7 bits (108), Expect = 1e-15 Identities = 157/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 38238 aaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAG 38297 || || ||||| || ||||| || || ||||| ||||| || |||||| |||| |||||| Sbjct 25053871 AACAAGATGCAGATCTTCGTTAAGACACTCACCGGCAAGACAATCACCCTCGAAGTCGAG 25053930 Query 38298 GCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGC 38356 |||||| | | |||| | || | || |||| ||||| || || || || | Sbjct 25053931 AGTTCCGACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACC 25053989 Query 38357 CGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGA 38416 |||||||| |||| || | || || || ||||| || |||| || ||| | ||| Sbjct 25053990 GGACCAACAAAGGCTTATCTTTGCTGGGAAGCAGCTCGAGGACGGCCGAACCTTGGCCGA 25054049 Query 38417 CTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||| ||||| |||| || || | || || ||| Sbjct 25054050 TTACAACATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGT 25054092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170105319040