Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1 188 1e-42 seq5 176 9e-39 seq7 152 1e-31 seq6 152 1e-31 seq9 118 2e-21 >seq1 Length=37323695 Score = 188 bits (208), Expect = 1e-42 Identities = 180/228 (79%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || |||| | ||| || || || || || || || || ||||| |||||||| |||| | Sbjct 11148008 CCACCTCGAAGACGAAGCACCAAATGAAGGGTGGACTCCTTCTGGATATTATAGTCAGCT 11147949 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||||||||| || ||||| ||||||||||| |||||||||||||| ||||| Sbjct 11147948 AGGGTGCGACCGTCTTCAAGCTGTTTGCCAGCAAAGATAAGTCTTTGTTGATCAGGAGGG 11147889 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762 ||||||||||| ||||| ||||| ||||| ||||| ||||| |||||| || | || || Sbjct 11147888 ATTCCTTCCTTGTCTTGGATCTTCGCTTTAACATTGTCAATAGTATCA-GAGCTCTCAAC 11147830 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || ||||| ||||| | ||||| ||||| || ||||| Sbjct 11147829 CTCCAAGGTGATAGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 11147782 Score = 163 bits (180), Expect = 6e-35 Identities = 167/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 82593 AAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTA 82652 ||||||| || ||||| || |||||||| || || |||||||| |||| ||| |||| Sbjct 11148455 AAACGCAACACCAAGTGAAGGGTAGATTCCTTTTGGATATTATAGTCAGCGAGAGTTCTT 11148396 Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||| || || || ||||||||||| || ||||| || ||||| || || || ||| Sbjct 11148395 CCATCTTCAAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATACCCTCC 11148336 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 |||||||| |||||||| || ||||| ||||| || || | || || ||||| || Sbjct 11148335 TTATCTTGGATCTTTGCCTTCACATTATCAATGGTGTCTGAACTCTCAACCTCCAATGTG 11148276 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || || | ||||| ||||| || ||||| Sbjct 11148275 ATAGTCTTTCCGGTAAGAGTCTTCACAAAAATTTGCAT 11148238 Score = 156 bits (172), Expect = 8e-33 Identities = 174/230 (76%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || || || || || || || ||||| |||||||| |||| Sbjct 11147782 TACCACCACGGAGACGAAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTATAGTCAG 11147723 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| ||| ||| ||||| || ||||| |||||||| || || ||||| || || |||| Sbjct 11147722 CTAGGGTTCGACCATCTTCAAGCTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCAGGAG 11147663 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | ||||||||||| ||||| ||||| || || ||||| ||||| |||||| || | || Sbjct 11147662 GGATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTGTCAATAGTATCAG-AGCTCTCA 11147604 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | || || ||||||||||| | || || ||||| || ||||| Sbjct 11147603 ACCTCAAGGGTGATGGTCTTGCCTGTTAGGGTTTTCACAAAGATTTGCAT 11147554 Score = 154 bits (170), Expect = 3e-32 Identities = 166/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| ||||| || || || || || || || |||||||||| || | || || Sbjct 11148225 ACGGAGAACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAATCAGCAAGTGTCCTTCC 11148166 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| ||||||||||||||||| || | || || |||||||| || || || || || Sbjct 11148165 ATCTTCAAGTTGTTTTCCAGCAAAAATCAACCTCTGCTGATCTGGTGGGATACCCTCTTT 11148106 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 ||| |||||||| || || ||||| ||||| || || || | ||||| |||||||| | Sbjct 11148105 ATCCTGAATCTTAGCCTTGACATTGTCAATAGTGTC-CGAGCTCTCTACCTCCAAAGTGA 11148047 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || ||||| | ||||| ||||| || ||||| Sbjct 11148046 TCGTTTTACCTGTGAGAGTCTTGACAAAGATTTGCAT 11148010 Score = 143 bits (158), Expect = 5e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| | |||| || ||||| ||||| || || || || | ||| |||| || Sbjct 11148680 CGAAGAACAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGAGTTCTCCCA 11148621 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || || |||||||| || | || || || |||||||| || || ||||| Sbjct 11148620 TCCTCCAGCTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGGATCCCCTCCTTG 11148561 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774 || || |||||||| || ||||| ||||| || || | || | || || ||||| ||||| Sbjct 11148560 TCCTGGATCTTTGCCTTCACATTATCAATGGTGTC-TGAGCTATCAACCTCCAACGTTAT 11148502 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || ||||| ||||| |||||||||||||| Sbjct 11148501 TGTCTTTCCAGTCAAGGTCTTCACAAATATCTGCAT 11148466 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || || | ||| || || | ||| || || ||||| ||||| ||||| || || | | Sbjct 32435688 CCACCCCTGAGACGGAGGACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAGTCGGCT 32435747 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | |||||||| || || || || || ||||| || | ||| ||||| || || Sbjct 32435748 AAGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGATCCGGTGGG 32435807 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| || || ||||| ||||| ||||| || || || ||| | ||| || Sbjct 32435808 ATTCCTTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGGATTCGACC 32435867 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | ||||| ||||| || || | || || || || |||||||| Sbjct 32435868 TCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTGACGAAGATCTGCAT 32435914 >seq5 Length=39371879 Score = 176 bits (194), Expect = 9e-39 Identities = 169/217 (78%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || ||||| |||||||| || |||||||||| || | | || || Sbjct 2688213 ACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTATAATCAGCTAAAGTCCTCCC 2688272 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || | ||| || || |||||||| || ||||| |||||||| || ||||||||||| Sbjct 2688273 ATCCTCCAATTGCTTCCCGGCAAAGATAAGCCTTTGCTGATCTGGGGGGATTCCTTCCTT 2688332 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||| ||||||||||| || ||||| || || ||||| | ||| || ||||| || || Sbjct 2688333 ATCCTGAATCTTTGCCTTGACATTATCGATTGTATCCGAACTTTCCACCTCCAAGGTGAT 2688392 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || || ||||| ||||| ||||| ||||||||| Sbjct 2688393 TGTTTTTCCAGTCAAGGTCTTGACAAAAATCTGCATT 2688429 Score = 136 bits (150), Expect = 8e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || ||||| || ||||| || ||||||| | | || ||||| || || || Sbjct 2688454 TGAAGGGTTGATTCCTTTTGTATGTTGTAATCAGCCAAGGTCCTCCCGTCCTCAAGCTGC 2688513 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||| ||||| | || |||||| ||||| || || |||||||||||||| ||||| Sbjct 2688514 TTCCCAGCGAAGATCAATCGTTGTTGGTCTGGTGGGATCCCTTCCTTATCTTGGATCTTG 2688573 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || || || |||||||| || || | || || |||| ||||| ||||| ||||| Sbjct 2688574 GCCTTAACGTTATCAATCGTGTC-CGAGCTCTCGACCTCCAGGGTTATAGTCTTTCCTGT 2688632 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 ||| || || ||||| || ||||| Sbjct 2688633 CAAGGTTTTGACAAAGATTTGCAT 2688656 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || | ||| ||||| || || || || ||||||||||||| | | | | ||||| Sbjct 2688673 AGGACAAGGTGGAGAGTCGACTCCTTTTGGATATTATAATCAGCCAAAGTACGGCCGTCC 2688732 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || || ||||| || || ||||| || | ||||| || ||||| || ||||| || || Sbjct 2688733 TCCAGCTGTTTCCCGGCGAAGATGAGCCGCTGTTGGTCGGGAGGGATGCCTTCTTTGTCC 2688792 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 || || || || || || || || ||||| || | || ||||| | || || || Sbjct 2688793 TGGATTTTGGCCTTGACGTTGTCGATCGTGTCGGAACTCTCGACTTCGAGGGTGATGGTT 2688852 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| ||||| || || ||||| || ||||| Sbjct 2688853 TTGCCGGTCAAAGTTTTGACAAAGATTTGCAT 2688884 >seq7 Length=21614486 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || |||||| || ||||| || || || || || || ||||| ||||| | Sbjct 2883016 CCACCACGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATCTGCA 2883075 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | || || || || | ||||| || ||||| || || || |||||||||||||| Sbjct 2883076 AGCGTCCTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAGGG 2883135 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| || || ||||| ||||||||||| ||||| |||||| | || ||| Sbjct 2883136 ATACCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTCTCAACT 2883195 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || ||||| || || | ||||| ||||| || ||||| Sbjct 2883196 TCCAAGGTAATAGTCTTTCCAGTGAGAGTCTTCACAAAAATTTGCAT 2883242 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| | ||| || || || || ||||| ||||| ||||||| || | | || Sbjct 2883484 CGAAGAACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCAGCAAGGGTGCGGCCA 2883543 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || ||||| ||||| ||||||||||| || || ||||| ||||| || || |||||||| Sbjct 2883544 TCCTCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTTG 2883603 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||||||||| ||||| ||||| ||||| || ||| ||| || || | || || Sbjct 2883604 TCTTGAATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCCACCTCGAGGGTGATG 2883663 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | || || ||||| |||||||| Sbjct 2883664 GTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 2883698 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || |||||| || ||||| || || || || || || ||||| ||||| | Sbjct 2896006 CCACCACGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATCTGCA 2896065 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | || || || || | ||||| || ||||| || || || |||||||||||||| Sbjct 2896066 AGCGTCCTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAGGG 2896125 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| || || ||||| ||||||||||| ||||| |||||| | || ||| Sbjct 2896126 ATACCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTCTCAACT 2896185 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || ||||| || || | || || ||||| || ||||| Sbjct 2896186 TCCAAGGTAATTGTCTTTCCAGTGAGAGTTTTCACAAAAATTTGCAT 2896232 Score = 145 bits (160), Expect = 1e-29 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||||| |||| ||| || ||||| || || || || || || ||||| || | Sbjct 2882788 CCTCCTCTCAGGCGCAAAACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCA 2882847 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | || || || || || || ||||||||||| || | || ||||| || || || Sbjct 2882848 AGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTGGG 2882907 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762 || || ||||||||||| ||||| ||||| || || ||||| || ||| || | || || Sbjct 2882908 ATACCCTCCTTATCTTGGATCTTGGCTTTAACGTTGTCAATTGTGTCA-GAGCTCTCCAC 2882966 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||||||| || || || || ||||| || || ||||| ||||||||| Sbjct 2882967 CTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCATT 2883015 Score = 145 bits (160), Expect = 1e-29 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||| | |||| || || ||||| || || || || || || ||||| || | Sbjct 2895778 CCTCCTCTAAGGCGCAAGACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCA 2895837 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | || || ||||| || || ||||||||||| || | || ||||| || || || Sbjct 2895838 AGTGTCCTCCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTGGG 2895897 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762 || || ||||||||||| ||||| ||||| ||||| ||||| || ||| || | || || Sbjct 2895898 ATACCCTCCTTATCTTGGATCTTGGCTTTGACATTGTCAATTGTGTCA-GAGCTCTCCAC 2895956 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||||||| || || || || ||||| || || ||||| ||||||||| Sbjct 2895957 CTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCATT 2896005 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || || | ||| || || | ||| || || || || ||||| ||||| ||||||| Sbjct 2896462 CCACCCCTAAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCAGCA 2896521 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || || ||||| ||||| ||||||||||| || || ||||| ||||| || Sbjct 2896522 AGGGTGCGGCCATCCTCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGG 2896581 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| ||||| ||||| ||||| ||||| ||||| || ||| ||| || Sbjct 2896582 ATCCCTTCCTTGTCTTGGATCTTGGCTTTGACATTATCAATAGTGTCAGAGCTTTCCACC 2896641 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || |||||||| || | || || ||||| |||||||| Sbjct 2896642 TCGAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 2896688 Score = 140 bits (154), Expect = 6e-28 Identities = 155/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || || || ||||| ||||| || |||| ||| | | ||| || || | || Sbjct 2882584 TGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATCCTCCAACTGC 2882643 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| | || || || |||||||| || || ||||| || ||||||||| Sbjct 2882644 TTGCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTGAATCTTT 2882703 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 ||||| ||||| |||||||| || | || | || || |||| || || || || || || Sbjct 2882704 GCTTTCACATTGTCAATCGTGTC-TGAGCTCTCAACCTCCAGGGTGATGGTTTTCCCAGT 2882762 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 ||| ||||| |||||||||||||| Sbjct 2882763 CAAGGTCTTCACAAATATCTGCAT 2882786 Score = 136 bits (150), Expect = 8e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || || || ||||| ||||| || |||| ||| | | ||| || || | || Sbjct 2895574 TGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATCCTCCAACTGC 2895633 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| | || || || |||||||| || || ||||| || ||||||||| Sbjct 2895634 TTACCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTGAATCTTT 2895693 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 ||||| ||||| ||||| || || | || | || || |||| || || || || || || Sbjct 2895694 GCTTTCACATTGTCAATTGTGTC-TGAGCTCTCAACCTCCAGGGTGATGGTTTTCCCAGT 2895752 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 ||| ||||| |||||||||||||| Sbjct 2895753 CAATGTCTTGACAAATATCTGCAT 2895776 Score = 131 bits (144), Expect = 3e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 |||| || || || || || || || ||||| || ||||| || | || |||| || Sbjct 2883256 CGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCAAGGGTTCTGCCA 2883315 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| || |||||||||||||| |||| || || || ||||| || || || ||||| Sbjct 2883316 TCTTCAAGCTGTTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGGATACCCTCCTTG 2883375 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || |||||||| || || ||||| || || ||||| | || || |||||||| || Sbjct 2883376 TCCTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCACCTCCAAAGTGATG 2883435 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || || | || || |||||||||||||| Sbjct 2883436 GTTTTCCCAGTGAGAGTTTTCACAAATATCTGCAT 2883470 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 |||| || || || || || || || ||||| || ||||| || | || |||| || Sbjct 2896246 CGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCAAGGGTTCTGCCA 2896305 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| || |||||||| ||||| |||| || || || || || || || || ||||| Sbjct 2896306 TCTTCAAGCTGTTTTCCGGCAAAAATTAACCTCTGCTGGTCCGGTGGGATACCCTCCTTG 2896365 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || |||||||| || || ||||| || || ||||| | || || |||||||| || Sbjct 2896366 TCCTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCACCTCCAAAGTGATG 2896425 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || || | || || |||||||||||||| Sbjct 2896426 GTTTTCCCAGTGAGAGTTTTCACAAATATCTGCAT 2896460 Score = 102 bits (112), Expect = 2e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| || | | || ||| ||||| ||||| || || || || || |||||||| | Sbjct 12529395 CCTCCCCTAAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCTGCA 12529336 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| ||| ||| ||||| || ||||| |||||||| || | ||| || ||||| ||||| Sbjct 12529335 AGAGTTCGACCATCTTCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAGGG 12529276 Query 82704 ATTCCTTCCTTATC 82717 ||||||||||| || Sbjct 12529275 ATTCCTTCCTTGTC 12529262 Score = 102 bits (112), Expect = 2e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| || | | || ||| ||||| ||||| || || || || || |||||||| | Sbjct 12548021 CCTCCCCTAAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCTGCA 12547962 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| ||| ||| ||||| || ||||| |||||||| || | ||| || ||||| ||||| Sbjct 12547961 AGAGTTCAACCATCTTCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAGGG 12547902 Query 82704 ATTCCTTCCTTATC 82717 ||||||||||| || Sbjct 12547901 ATTCCTTCCTTGTC 12547888 Score = 102 bits (112), Expect = 2e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| || | | || ||| ||||| ||||| || || || || || |||||||| | Sbjct 12607093 CCTCCCCTAAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCTGCA 12607034 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| ||| ||| || || || ||||| |||||||| || | ||| || ||||| ||||| Sbjct 12607033 AGAGTTCGACCATCCTCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAGGG 12606974 Query 82704 ATTCCTTCCTTATC 82717 |||||||||||||| Sbjct 12606973 ATTCCTTCCTTATC 12606960 >seq6 Length=26303135 Score = 152 bits (168), Expect = 1e-31 Identities = 165/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 |||| || | ||| || || || || ||||| ||||| ||||||| ||| | || || Sbjct 25054547 CGCAAGACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCCAGAGTCCTTCCA 25054488 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| | ||| || |||||||| || | ||||| |||||||| || || |||||||| Sbjct 25054487 TCTTCCAATTGCTTCCCAGCAAATATCAACCTTTGCTGATCTGGTGGAATCCCTTCCTTG 25054428 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774 || ||||||||||| || ||||| ||||| ||||| || | || || |||||||| || Sbjct 25054427 TCCTGAATCTTTGCCTTAACATTATCAATGGTATC-CGAGCTCTCCACCTCCAAAGTAAT 25054369 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || ||||||| ||||| || || |||||||| Sbjct 25054368 GGTTTTCCCTGTCAGAGTCTTAACGAAAATCTGCAT 25054333 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657 || ||| || || || || || |||||||| || |||||||||| | | ||| |||||| Sbjct 25054317 CAAAACCAAATGAAGTGTCGACTCTTTCTGAATGTTATAATCAGCCAAAGTTCGACCGTC 25054258 Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 || || || || ||||||||||| || ||||| || ||||| || ||||||||||| || Sbjct 25054257 CTCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGCGGGATTCCTTCCTTGTC 25054198 Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777 || ||||| || || || || || || || || ||| ||||||| |||||||| Sbjct 25054197 CTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCGACTTCCAGGGTTATCGT 25054138 Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| || |||| ||||| || || |||||||| Sbjct 25054137 CTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 25054105 Score = 120 bits (132), Expect = 6e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| ||||| || || ||||| || || ||||| | | ||| || Sbjct 25054092 ACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCC 25054033 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||| || || || || ||||||||||| || |||||||| || || || || |||||||| Sbjct 25054032 GTCCTCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATCCCTTCCTT 25053973 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || || ||||| || || || || || ||||| || | || ||||| | || || Sbjct 25053972 GTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAACTCTCGACTTCGAGGGTGAT 25053913 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | ||||| || || |||||||| Sbjct 25053912 TGTCTTGCCGGTGAGTGTCTTAACGAAGATCTGCAT 25053877 >seq9 Length=38630433 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| || ||||| || ||||| || || ||||| | ||| | | || Sbjct 27803934 CGAAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCTGCAAGAGTACGCCCA 27803875 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || | ||| || ||||| || || || || || ||||| || || || || |||||| Sbjct 27803874 TCCTCCAATTGCTTCCCAGCGAAAATGAGCCTCTGCTGATCAGGTGGAATCCCCTCCTTA 27803815 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 |||||||| || || || || || || || |||||| | || || || | || ||| Sbjct 27803814 TCTTGAATTTTCGCCTTCACGTTATCGATTGTATCAGAACTCTCCACCTCAAGCGTAATC 27803755 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || |||| |||||| || || |||||||| Sbjct 27803754 GTCTTTCCAGTCAGCGTCTTCACGAAGATCTGCAT 27803720 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657 ||| || | ||| ||||| || || ||||| || || ||||| | || | || ||||| Sbjct 27803704 CAGCACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTCCTGCCGTC 27803645 Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 || | || || || || || || | || || ||||| ||||| || ||||||||||| Sbjct 27803644 CTCCAACTGCTTCCCGGCGAATATCAACCTCTGCTGATCCGGAGGGATCCCTTCCTTATC 27803585 Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777 || || ||||| || || || ||||| ||||| | ||||| |||| ||| || || Sbjct 27803584 CTGGATTTTTGCCTTGACGTTATCAATTGTATCCGAACTCTCTACCTCCAGAGTAATAGT 27803525 Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || ||||| || || || || |||||||| Sbjct 27803524 TTTCCCGGTCAAGGTTTTAACGAAAATCTGCAT 27803492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981821778166109