Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq5 165 2e-35 seq6 132 1e-25 seq9 125 2e-23 seq7 114 3e-20 seq1 105 2e-17 seq2 89.7 1e-12 >seq5 Length=39371879 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || | || |||||||| ||||| ||||| ||||||||||| || Sbjct 2688425 CAGATTTTTGTCAAGACCTTGACTGGAAAAACAATCACCTTGGAGGTGGAAAGTTCGGAT 2688366 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| |||| || ||| ||||||||| || || |||||||| || || ||| Sbjct 2688365 ACAATCGATAATGTCAAGGCAAAGATTCAGGATAAGGAAGGAATCCCCCCAGATCAGCAA 2688306 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || |||||||| ||||| ||||| ||||| ||||| |||||||| || ||||| ||| | Sbjct 2688305 AGGCTTATCTTTGCCGGGAAGCAATTGGAGGATGGGAGGACTTTAGCTGATTATAACATT 2688246 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 |||||||||||||| || |||||||| Sbjct 2688245 CAGAAAGAGTCTACCCTCCACCTTGT 2688220 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| | || || ||||| ||||| | |||||||| ||||| ||| Sbjct 2689109 CAGATCTTCGTCAAAACCTTGACCGGTAAAACCATCACCCTCGAAGTGGAGAGTTCCGAC 2689050 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| ||||| || ||||| || || ||| ||| Sbjct 2689049 ACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCACCCGACCAGCAA 2688990 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||||||||| || ||| | ||||| || | || ||||| ||||| ||| || Sbjct 2688989 AGGCTCATCTTCGCCGGGAAACAGCTCGAAGACGGTCGTACCTTGGCGGATTATAACATC 2688930 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| ||||| ||||| || Sbjct 2688929 CAGAAGGAGTCAACTCTCCACCTGGT 2688904 Score = 118 bits (130), Expect = 3e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| |||||| | |||||||| || || || |||| || || || || ||| Sbjct 2688653 CAAATCTTTGTCAAAACCTTGACAGGAAAGACTATAACCCTGGAGGTCGAGAGCTCGGAC 2688594 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| ||||| || ||||| || || ||| ||| Sbjct 2688593 ACGATTGATAACGTTAAGGCCAAGATCCAAGATAAGGAAGGGATCCCACCAGACCAACAA 2688534 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | |||||||| || |||||| | || || || ||||| ||||| ||||||||| | Sbjct 2688533 CGATTGATCTTCGCTGGGAAGCAGCTTGAGGACGGGAGGACCTTGGCTGATTACAACATA 2688474 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || || || || || ||||| ||||||||||| ||||| Sbjct 2688473 CAAAAGGAATCAACCCTTCATCTTGTTTTGAGGCTTCG 2688436 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| |||||| | || || ||||| ||||| | ||||| || ||||| ||| Sbjct 2688881 CAAATCTTTGTCAAAACTTTGACCGGCAAAACCATCACCCTCGAAGTCGAGAGTTCCGAC 2688822 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| || || || || |||||||| || || ||| || Sbjct 2688821 ACGATCGACAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATCCCTCCCGACCAACAG 2688762 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| || ||| |||| || || | |||||||| ||||| || || Sbjct 2688761 CGGCTCATCTTCGCCGGGAAACAGCTGGAGGACGGCCGTACTTTGGCTGATTATAATATC 2688702 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || || ||||| ||||| |||||||| Sbjct 2688701 CAAAAGGAGTCGACTCTCCACCTTGT 2688676 Score = 100 bits (110), Expect = 7e-16 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 |||||||| || |||||||||||||| | ||||| ||||| |||||||| ||||| ||| Sbjct 2688220 ACAAGGTGGAGGGTAGACTCTTTCTGAATGTTATAATCAGCTAAAGTCCTCCCATCCTCC 2688279 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | ||||| ||||| |||||||||| ||| ||| Sbjct 2688280 AATTGCTTCCCGGCAAAGATAAGCCTTTGCTGA 2688312 Score = 98.7 bits (108), Expect = 2e-15 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 |||||||| ||||| ||||| || |||| |||||| ||||||||||| | || || ||| Sbjct 2688676 ACAAGGTGGAGAGTCGACTCCTTTTGGATATTATAATCAGCCAAAGTACGGCCGTCCTCC 2688735 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||| || ||||||||||| ||||| ||||| Sbjct 2688736 AGCTGTTTCCCGGCGAAGATGAGCCGCTGTTG 2688767 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| ||||||||||| ||||| || || || || || | || || |||||||| ||| Sbjct 2688436 CGAAGCCTCAAAACAAGATGAAGGGTTGATTCCTTTTGTATGTTGTAATCAGCCAAGGTC 2688495 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 || || || || |||||||| || |||||||| | |||||||| Sbjct 2688496 CTCCCGTCCTCAAGCTGCTTCCCAGCGAAGATCAATCGTTGTTG 2688539 >seq6 Length=26303135 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || ||||| ||||| || |||||||| ||||| || || || || | || Sbjct 25054348 AAGACTCTGACAGGGAAAACCATTACTTTGGAGGTGGAGAGCTCGGATACCATTGATAAT 25054407 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||| || || ||||| ||| || || ||||| | || || Sbjct 25054408 GTTAAGGCAAAGATTCAGGACAAGGAAGGGATTCCACCAGATCAGCAAAGGTTGATATTT 25054467 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| |||||||||||||||||| |||| |||||||| | ||||| ||||| Sbjct 25054468 GCTGGGAAGCAATTGGAAGATGGAAGGACTCTGGCTGATTACAATATTCAGAAGGAGTCC 25054527 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || |||||||| || ||| | ||||| Sbjct 25054528 ACCCTTCACCTGGTCTTGCGCCTTCG 25054553 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || ||||| || ||||||| ||||| || ||| Sbjct 25054108 CAGATCTTCGTCAAGACCCTGACGGGTAAGACGATAACCCTGGAAGTCGAAAGCTCCGAC 25054167 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || |||||||| ||| ||| ||| Sbjct 25054168 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGAATCCCGCCAGACCAGCAA 25054227 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || |||||||| || || |||||| | || || || | |||||||| ||||| ||| | Sbjct 25054228 AGGCTTATCTTTGCTGGGAAGCAGCTCGAGGACGGTCGAACTTTGGCTGATTATAACATT 25054287 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||||||| || ||||| | |||||||| || || Sbjct 25054288 CAGAAAGAGTCGACACTTCATTTGGTTTTGAGGCTCCG 25054325 Score = 120 bits (132), Expect = 7e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || ||||| | ||||| || ||||| ||||| |||| Sbjct 25053892 AAGACACTCACCGGCAAGACAATCACCCTCGAAGTCGAGAGTTCCGACACGATCGACAAC 25053951 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||| || |||||| ||||| |||||||| Sbjct 25053952 GTGAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCGGACCAACAAAGGCTTATCTTT 25054011 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | || || || | || ||||||||||||||| ||||||| ||||| Sbjct 25054012 GCTGGGAAGCAGCTCGAGGACGGCCGAACCTTGGCCGATTACAACATCCAGAAGGAGTCG 25054071 Query 206365 ACTCTTCACCTTGT 206378 ||||| ||||| || Sbjct 25054072 ACTCTCCACCTCGT 25054085 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| | ||| || |||||||| || ||||| ||||| | ||| || ||||||| |||| Sbjct 25054553 CGAAGGCGCAAGACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCCAGAGTC 25054494 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||||||||||||| ||||| || || || || | || ||| ||| Sbjct 25054493 CTTCCATCTTCCAATTGCTTCCCAGCAAATATCAACCTTTGCTGA 25054449 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || || |||||||| | ||||| || ||||||||||| | ||||| ||||||||||| Sbjct 25054325 CGGAGCCTCAAAACCAAATGAAGTGTCGACTCTTTCTGAATGTTATAATCAGCCAAAGTT 25054266 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | || || || |||||||| || || |||||||||| ||| || Sbjct 25054265 CGACCGTCCTCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTG 25054222 >seq9 Length=38630433 Score = 125 bits (138), Expect = 2e-23 Identities = 144/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||||| || ||||| ||||| || | || ||||| |||||||| ||| |||| Sbjct 27803735 AAGACGCTGACTGGAAAGACGATTACGCTTGAGGTGGAGAGTTCTGATACAATCGATAAC 27803794 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || |||||||| || || || ||| || || || || || || ||| Sbjct 27803795 GTGAAGGCGAAAATTCAAGATAAGGAGGGGATTCCACCTGATCAGCAGAGGCTCATTTTC 27803854 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||| ||||| | ||| | || ||||||||| ||||||| |||||| Sbjct 27803855 GCTGGGAAGCAATTGGAGGATGGGCGTACTCTTGCAGATTACAACATCCAGAAGGAGTCT 27803914 Query 206365 ACTCTTCACCTTGT 206378 || ||||||||||| Sbjct 27803915 ACCCTTCACCTTGT 27803928 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| || ||| |||| || || ||||| || ||| | || Sbjct 27803507 AAAACCTTGACCGGGAAAACTATTACTCTGGAGGTAGAGAGTTCGGATACAATTGATAAC 27803566 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||| || || || || ||||| || ||||| || || | || ||| Sbjct 27803567 GTCAAGGCAAAAATCCAGGATAAGGAAGGGATCCCTCCGGATCAGCAGAGGTTGATATTC 27803626 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| ||||||||||| || || ||||| | || ||||||||| ||||||| ||||| Sbjct 27803627 GCCGGGAAGCAGTTGGAGGACGGCAGGACCCTTGCGGATTACAACATCCAGAAGGAGTCC 27803686 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||||||||| |||| || || Sbjct 27803687 ACTCTTCACCTTGTGCTGAGGCTCCG 27803712 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| || || || || || |||||| | ||||| ||||| |||||| Sbjct 27803267 CAGATCTTCGTCAAAACCCTAACCGGCAAGACCATCACTCTTGAAGTCGAAAGCTCTGAC 27803326 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| ||||| || || || || |||||| || Sbjct 27803327 ACGATCGACAACGTTAAGGCCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAG 27803386 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | |||||||| || |||||| | || || || | || |||| || ||||| || Sbjct 27803387 CGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCGGACTACAATATC 27803446 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| || || || ||||||||||| Sbjct 27803447 CAGAAGGAATCAACCCTTCACCTTGT 27803472 Score = 86.0 bits (94), Expect = 1e-11 Identities = 140/197 (71%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || ||||| ||||| | || ||||| || || ||||| |||| Sbjct 27803051 AAAACCCTAACCGGCAAAACCATCACCCTCGAGGTGGAGAGCTCAGACACCATCGACAAC 27803110 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGA-CTT-ATC 206301 || ||| ||||| ||||| || ||||| ||| || || |||| || ||| ||| Sbjct 27803111 GTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCTGA---TCAACAGCGCTTGATC 27803167 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 |||||||| ||||| | ||||| || | || | || |||||||| |||| || || Sbjct 27803168 TTCGCCGGCAAGCAACTTGAAGACGGCCGAACCCTTGCGGATTACAATATCCAAAAGGAA 27803227 Query 206362 TCTACTCTTCACCTTGT 206378 || ||||| ||||| || Sbjct 27803228 TCGACTCTCCACCTGGT 27803244 >seq7 Length=21614486 Score = 114 bits (126), Expect = 3e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| ||| || | || || ||||| ||||| |||| || || || || ||| Sbjct 2895773 CAGATATTTGTCAAGACATTGACTGGGAAAACCATCACCCTGGAGGTTGAGAGCTCAGAC 2895714 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | || || |||||||| |||||| || || || || ||| || ||| || Sbjct 2895713 ACAATTGACAATGTGAAAGCAAA-GATTCAGGACAAGGAGGGGATTCCTCCAGACCAGCA 2895655 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || | ||||| || || ||||||||||| ||||| | ||| |||| || ||||| | Sbjct 2895654 GAGGTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTCGCACTCTGGCTGACTACAATAT 2895595 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378 |||||| ||||| || ||||| ||||| Sbjct 2895594 CCAGAAGGAGTCCACCCTTCATCTTGT 2895568 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| ||||| ||||| || ||||| ||||||||||| ||||| ||||| || Sbjct 2896457 CAGATATTTGTGAAAACTCTCACTGGGAAAACCATCACTTTGGAGGTGGAGAGTTCGGAT 2896398 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || || || || |||||| || Sbjct 2896397 ACCATCGATAATGTGAAGGCCAAGATTCAGGACAAGGAGGGTATCCCACCGGACCAGCAG 2896338 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | || || |||||||| ||| | |||||||| || || | || || || ||| | Sbjct 2896337 AGGTTAATTTTTGCCGGAAAACAGCTTGAAGATGGCAGAACCCTTGCAGACTATAACATT 2896278 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| || || || | || ||| | ||||| Sbjct 2896277 CAGAAGGAGTCAACCCTCCATTTGGTGTTGCGGCTTCG 2896240 Score = 109 bits (120), Expect = 1e-18 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || || || || || ||||| | || |||||||| |||||| Sbjct 2883695 CAGATCTTTGTGAAAACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAAAGCTCTGAC 2883636 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | || || ||||| || ||||||||| || ||||| || || ||| || Sbjct 2883635 ACTATTGATAATGTCAAAGCTAA-GATTCAAGACAAGGAAGGGATCCCACCAGACCAACA 2883577 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || |||||||| || || || ||| | || ||||| | || | || |||||||| | Sbjct 2883576 GAGGCTTATCTTTGCTGGTAAACAGCTAGAGGATGGCCGCACCCTTGCTGATTACAATAT 2883517 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTT 206388 |||||| ||||| || || ||||||||| | ||||| Sbjct 2883516 CCAGAAGGAGTCCACCCTCCACCTTGTTCTTCGACTT 2883480 Score = 105 bits (116), Expect = 2e-17 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || | || || ||||| ||||| |||| || || || || ||| Sbjct 2882783 CAGATATTTGTGAAGACCTTGACTGGGAAAACCATCACCCTGGAGGTTGAGAGCTCAGAC 2882724 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | || || |||||||| |||||| || || || || ||| || ||| || Sbjct 2882723 ACGATTGACAATGTGAAAGCAAA-GATTCAGGACAAGGAGGGGATTCCTCCAGACCAGCA 2882665 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || | ||||| || || ||||||||||| ||||| | ||| |||| || ||||| | Sbjct 2882664 GAGGTTGATCTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACTCTGGCTGACTACAATAT 2882605 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378 |||||| ||||| || ||||| ||||| Sbjct 2882604 CCAGAAGGAGTCCACCCTTCATCTTGT 2882578 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| ||||| ||||| || ||||| ||||||||||| ||||| ||||| || Sbjct 2883467 CAGATATTTGTGAAAACTCTCACTGGGAAAACCATCACTTTGGAGGTGGAGAGTTCGGAT 2883408 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || || || || || ||| || Sbjct 2883407 ACCATCGATAATGTGAAGGCCAAGATTCAGGACAAGGAGGGTATCCCACCAGACCAGCAG 2883348 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | || || || ||||| ||| | |||||||| || || | || || || ||| | Sbjct 2883347 AGGTTAATTTTTGCTGGAAAACAGCTTGAAGATGGCAGAACCCTTGCAGACTATAACATT 2883288 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| || || || | || ||| |||| || Sbjct 2883287 CAGAAGGAGTCAACCCTCCATTTGGTGTTGCGACTCCG 2883250 Score = 104 bits (114), Expect = 6e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| | || || ||||| ||||||||||| ||||| || |||||| Sbjct 2883011 CAGATTTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAGGTGGAGAGCTCTGAC 2882952 Query 206233 ACAGTCGA-ATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | || | | |||||| ||||| ||||| || || || || || ||| || Sbjct 2882951 ACAATTGACAACGTTAAAGC-CAAGATCCAAGATAAGGAGGGTATCCCACCTGACCAACA 2882893 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || | || || || ||||||||| | || ||||| ||||| | || || || ||| | Sbjct 2882892 GAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGGAGGACACTTGCAGACTATAACAT 2882833 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382 ||| || ||||| || || || | |||||| Sbjct 2882832 CCAAAAGGAGTCAACCCTGCATTTGGTTTTG 2882802 Score = 102 bits (112), Expect = 2e-16 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| | || || ||||| ||||||||||| ||||| || |||||| Sbjct 2896001 CAGATTTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAGGTGGAGAGCTCTGAC 2895942 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | || || ||||| ||||| ||||| || || || || || ||| || Sbjct 2895941 ACAATTGACAATGTCAAAGC-CAAGATCCAAGATAAGGAGGGTATCCCACCTGACCAACA 2895883 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || | || || || ||||||||| | |||||||| ||||| | || || || ||| | Sbjct 2895882 GAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGGAGGACACTTGCAGACTATAACAT 2895823 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||| || ||||| || || || | || ||| | ||| || Sbjct 2895822 CCAAAAGGAGTCAACCCTGCATTTGGTCTTGCGCCTTAGA 2895783 >seq1 Length=37323695 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || |||||||| ||||||||||||||||| || || || || ||| Sbjct 11148013 CAAATCTTTGTCAAGACTCTCACAGGTAAAACGATCACTTTGGAGGTAGAGAGCTCGGAC 11148072 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||||| || ||||| || || || || || Sbjct 11148073 ACTATTGACAATGTCAAGGCTAAGATTCAGGATAAAGAGGGTATCCCACCAGATCAGCAG 11148132 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | || || || ||||| || | |||||||||||||| | || ||||| ||| | Sbjct 11148133 AGGTTGATTTTTGCTGGAAAACAACTTGAAGATGGAAGGACACTTGCTGATTATAACATT 11148192 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || || ||||| || |||||| | ||| | | ||||| Sbjct 11148193 CAAAAGGAGTCAACCCTTCACTTGGTTCTCCGTCTTCG 11148230 Score = 105 bits (116), Expect = 2e-17 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || ||||| || ||||| ||||| || || ||||| ||||| | || Sbjct 11148253 AAGACTCTTACCGGAAAGACTATCACATTGGAGGTTGAGAGTTCAGACACCATTGATAAT 11148312 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||| ||||| || || || || || ||| ||||| || ||||| Sbjct 11148313 GTGAAGGCAAAGATCCAAGATAAGGAGGGTATCCCACCAGACCAGCAAAGGCTCATCTTT 11148372 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | ||||||||||| ||| | || || || || |||| || || ||| Sbjct 11148373 GCTGGCAAGCAGCTTGAAGATGGAAGAACTCTCGCTGACTATAATATCCAAAAGGAATCT 11148432 Query 206365 ACTCTTCACCTTGTTTTG 206382 || |||||| | || ||| Sbjct 11148433 ACCCTTCACTTGGTGTTG 11148450 Score = 98.7 bits (108), Expect = 2e-15 Identities = 144/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || ||||||||||| || ||||| ||||| || || || ||||| Sbjct 11147785 CAAATCTTTGTCAAGACACTCACAGGAAAGACTATCACCTTGGAGGTTGAGAGCTCTGAT 11147844 Query 206233 ACAGTCGA-ATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | || | |||||| ||||| ||||| || |||||||| || || || Sbjct 11147845 ACTATTGACAATGTTAAAGC-GAAGATCCAAGACAAGGAAGGAATCCCTCCTGATCAACA 11147903 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||||||||||| || || || ||| | ||||| || | || | || || || || | Sbjct 11147904 AAGACTTATCTTTGCTGGCAAACAGCTTGAAGACGGTCGCACCCTAGCTGACTATAATAT 11147963 Query 206352 CCAGAAAGAGTCTACTCTTCA 206372 |||||| ||||| || ||||| Sbjct 11147964 CCAGAAGGAGTCCACCCTTCA 11147984 Score = 93.3 bits (102), Expect = 1e-13 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 204760 CAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATC 204819 ||| || | |||||| ||||| || || |||| |||||||||||| | ||| |||||||| Sbjct 11148450 CAACACCAAGTGAAGGGTAGATTCCTTTTGGATATTATAGTCAGCGAGAGTTCTTCCATC 11148391 Query 204820 TTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||| |||||||| || || ||||| |||| ||| || Sbjct 11148390 TTCAAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTG 11148355 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| || || || || || || || | || || ||| |||||| Sbjct 32435911 CAGATCTTCGTCAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTCGAATCCTCTGAC 32435852 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || |||| || ||||| || ||| || || || |||||||| ||||| || Sbjct 32435851 ACCATCGACAATGTCAAAGCCAA-GATCCAGGACAAGGAAGGAATCCCACCGGATCAGCA 32435793 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | | || ||||||||||| |||||| | ||||| || | || || ||||| ||||| | Sbjct 32435792 ACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACCTTAGCCGACTACAATAT 32435733 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| || || || |||||||| || Sbjct 32435732 TCAGAAGGAATCCACCCTTCACCTCGT 32435706 >seq2 Length=41236440 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || || || ||||| || ||| || ||||| |||| Sbjct 32406693 AAAACCCTAACGGGTAAGACCATAACCTTGGAGGTCGAATCCTCCGACACCATCGACAAC 32406634 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| || ||||| || |||||| ||| | || |||||| Sbjct 32406633 GTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGACCAACAACGTCTCATCTTC 32406574 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | ||||| || | || | ||||| || ||| | ||||| ||||| Sbjct 32406573 GCCGGCAAGCAGCTTGAAGACGGCCGTACCCTAGCCGACTATAACATTCAGAAGGAGTCC 32406514 Query 206365 ACTCTTCACCTTGT 206378 || || || || || Sbjct 32406513 ACCCTCCATCTGGT 32406500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181814273763951