Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq7 136 4e-27 seq1 136 4e-27 seq5 109 5e-19 seq6 104 2e-17 seq9 100 3e-16 >seq7 Length=21614486 Score = 136 bits (150), Expect = 4e-27 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | || |||||||||||| | || |||||| |||||||| || || || Sbjct 2896234 CCACCACGAAGCCGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCA 2896293 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| | || || ||||| || || ||||| || |||| ||||||||||| || Sbjct 2896294 AGGGTTCTGCCATCTTCAAGCTGTTTTCCGGCAAAAATTAACCTCTGCTGGTCCGGTGGG 2896353 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGA---TTCC 35686 | | |||||||||| ||||| ||||| | | | | || || ||| ||| Sbjct 2896354 ATACCCTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTATC---CGAACTCTCC 2896410 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| ||||| ||||| || || | ||||||||||||||||||||| Sbjct 2896411 ACCTCCAAAGTGATGGTTTTCCCAGTGAGAGTTTTCACAAATATCTGCAT 2896460 Score = 132 bits (146), Expect = 4e-26 Identities = 147/195 (75%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || ||||| || |||| || || | || |||| |||||| || ||||| Sbjct 2882595 CTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATCCTCCAACTGCTTGCCAGCAAA 2882654 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| ||||||||| | ||||| | |||||||||| |||||| |||| | | Sbjct 2882655 GATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTGAATCTTTGCTTTCACATT 2882714 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | |||||| |||| || ||||||| ||||| ||||| || ||||| || || Sbjct 2882715 GTCAATCGTGTCTGAGCTC---TCAACCTCCAGGGTGATGGTTTTCCCAGTCAAGGTCTT 2882771 Query 35722 CACAAATATCTGCAT 35736 ||||||||||||||| Sbjct 2882772 CACAAATATCTGCAT 2882786 Score = 127 bits (140), Expect = 2e-24 Identities = 162/219 (74%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 ||| |||||||| | || ||||||||| ||||| || || || | || | | | || Sbjct 2882802 CAAAACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCATC 2882861 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 || |||||||| || ||||| ||||||| ||| ||||| | || | | |||||| || Sbjct 2882862 CTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTGGGATACCCTCCTTATC 2882921 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACC-GTGTC---GCTCGATTCCACCTCCACCGTGA 35699 |||||| |||| | |||| || ||||| |||| |||||||||| |||| Sbjct 2882922 TTGGATCTTG-GCTTTAACGTTGTCAATTGTGTCAGAGCTC---TCCACCTCCAAAGTGA 2882977 Query 35700 TCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | |||||||| ||||| ||||||||||| |||||||||| Sbjct 2882978 TGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCATTC 2883016 Score = 127 bits (140), Expect = 2e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | |||||||||||| | || |||||| |||||||| || || || Sbjct 2883244 CCACCACGGAGTCGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCA 2883303 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| | || || ||||| || || ||||| || |||| ||||||||| | || Sbjct 2883304 AGGGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGG 2883363 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGA---TTCC 35686 | | |||||||||| ||||| ||||| | | | | || || ||| ||| Sbjct 2883364 ATACCCTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTATC---CGAACTCTCC 2883420 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| ||||| ||||| || || | ||||||||||||||||||||| Sbjct 2883421 ACCTCCAAAGTGATGGTTTTCCCAGTGAGAGTTTTCACAAATATCTGCAT 2883470 Score = 127 bits (140), Expect = 2e-24 Identities = 146/195 (75%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || ||||| || |||| || || | || |||| ||||||||| ||||| Sbjct 2895585 CTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATCCTCCAACTGCTTACCAGCAAA 2895644 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| ||||||||| | ||||| | |||||||||| |||||| |||| | | Sbjct 2895645 GATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTGAATCTTTGCTTTCACATT 2895704 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||||| |||| || ||||||| ||||| ||||| || ||||| || || Sbjct 2895705 GTCAATTGTGTCTGAGCTC---TCAACCTCCAGGGTGATGGTTTTCCCAGTCAATGTCTT 2895761 Query 35722 CACAAATATCTGCAT 35736 |||||||||||||| Sbjct 2895762 GACAAATATCTGCAT 2895776 Score = 120 bits (132), Expect = 3e-22 Identities = 158/218 (72%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 ||| |||||||| | || ||||||||| ||||| || || || | || | | | || Sbjct 2895792 CAAGACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCATC 2895851 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 || |||||||| || ||||| ||||||| ||| ||||| | || | | |||||| || Sbjct 2895852 TTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTGGGATACCCTCCTTATC 2895911 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGAT 35700 |||||| || | | | | | ||||| |||| |||||||||| ||||| Sbjct 2895912 TTGGATCTTGGCTTTGACATTGTCAATTGTGTCAGAGCTC---TCCACCTCCAAAGTGAT 2895968 Query 35701 CGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||||||| ||||| ||||||||||| |||||||||| Sbjct 2895969 GGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCATTC 2896006 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | || |||||| || | || ||||||||| || |||||||| | Sbjct 2896004 TTCCACCACGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATCTG 2896063 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | | || | | | || |||| ||| || || |||||||||| || ||| || || | || Sbjct 2896064 CAAGCGTCCTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAG 2896123 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCG---CTCGATT 35684 | | | ||||||||| |||||| || | | | | | || || ||| | Sbjct 2896124 GGATACCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTC---T 2896180 Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| || || || || || || | |||||||||||| || ||||| Sbjct 2896181 CAACTTCCAAGGTAATTGTCTTTCCAGTGAGAGTTTTCACAAAAATTTGCAT 2896232 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/200 (70%), Gaps = 7/200 (4%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || |||||||| || | ||| || | || || ||||| ||||| ||||| Sbjct 2896497 CTCCTTCTGGATATTGTAATCAGCAAGGGTGCGGCCATCCTCTAGCTGTTTACCAGCAAA 2896556 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||| ||||| | || | | |||||||| |||||| || | | | Sbjct 2896557 GATAAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCTTTGACATT 2896616 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||||| ||| ||||||||| | ||||| || || || || | ||||| Sbjct 2896617 ATCAATAGTGTCAGAGCT---TTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTTTT 2896673 Query 35722 CACAAATATCTGCATTCTGT 35741 |||||| ||||||| ||||| Sbjct 2896674 CACAAAGATCTGCA-TCTGT 2896692 >seq1 Length=37323695 Score = 136 bits (150), Expect = 4e-27 Identities = 147/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || |||| |||| | | || ||||||||||| || ||||| Sbjct 11148656 TCCTTCTGGATGTTGTAGTCTGCCAGAGTTCTCCCATCCTCCAGCTGCTTCCCAGCAAAA 11148597 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||||| ||||||||| | ||| | | |||||||||| ||||||| ||||| | | Sbjct 11148596 ATCAACCTCTGCTGGTCTGGAGGGATCCCCTCCTTGTCCTGGATCTTTGCCTTCACATTA 11148537 Query 35666 GCCACCGTGTC-GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| | | | || ||||||| ||| || || || || ||||| || ||||| Sbjct 11148536 TCAATGGTGTCTGAGCTA-TCAACCTCCAACGTTATTGTCTTTCCAGTCAAGGTCTTCAC 11148478 Query 35725 AAATATCTGCAT 35736 |||||||||||| Sbjct 11148477 AAATATCTGCAT 11148466 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||||||||| | ||||||||| || | ||| |||||||| || || || || || Sbjct 11148464 CCACCACGTAAACGCAACACCAAGTGAAGGGTAGATTCCTTTTGGATATTATAGTCAGCG 11148405 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| | || || |||||||| || ||||| || | || |||||||| | || Sbjct 11148404 AGAGTTCTTCCATCTTCAAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 11148345 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | |||||| || ||||||| ||||| | | | | ||||| ||| || Sbjct 11148344 ATACCCTCCTTATCTTGGATCTTTGCCTTCACATTATCAATGGTGTCTGAACTC---TCA 11148288 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| ||||| || || || || | ||| |||||||| || ||||| Sbjct 11148287 ACCTCCAATGTGATAGTCTTTCCGGTAAGAGTCTTCACAAAAATTTGCAT 11148238 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||||||||| ||||| || | || | | || || || || || || ||||| Sbjct 11148201 CTCCTTTTGAATGTTATAATCAGCAAGTGTCCTTCCATCTTCAAGTTGTTTTCCAGCAAA 11148142 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| |||||| || | || | | ||| || ||| ||||| ||| | | | Sbjct 11148141 AATCAACCTCTGCTGATCTGGTGGGATACCCTCTTTATCCTGAATCTTAGCCTTGACATT 11148082 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||||| |||| || ||||||| |||||||||||||| || | ||| || Sbjct 11148081 GTCAATAGTGTCCGAGCTC---TCTACCTCCAAAGTGATCGTTTTACCTGTGAGAGTCTT 11148025 Query 35722 CACAAATATCTGCAT 35736 ||||| || ||||| Sbjct 11148024 GACAAAGATTTGCAT 11148010 >seq5 Length=39371879 Score = 109 bits (120), Expect = 5e-19 Identities = 164/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||| ||||| | |||||| || | ||| | || |||||||| ||||||||||| | Sbjct 2688428 TTCCTCCACGAAGCCTCAAAACAAGATGAAGGGTTGATTCCTTTTGTATGTTGTAATCAG 2688487 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 ||||||| | | |||| || |||||||| || || || ||||| || || ||||| | | Sbjct 2688488 CCAAGGTCCTCCCGTCCTCAAGCTGCTTCCCAGCGAAGATCAATCGTTGTTGGTCTGGTG 2688547 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATT 35684 | | | ||||| || |||||| ||| | | | | |||||| |||| | Sbjct 2688548 GGATCCCTTCCTTATCTTGGATCTTGGCCTTAACGTTATCAATCGTGTCCGAGCTC---T 2688604 Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||||||| || || || || || ||||| ||||| ||||| || ||||| Sbjct 2688605 CGACCTCCAGGGTTATAGTCTTTCCTGTCAAGGTTTTGACAAAGATTTGCAT 2688656 Score = 104 bits (114), Expect = 2e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| || || ||||| ||||| || || |||| |||||||| || || || || Sbjct 2688693 CTCCTTTTGGATATTATAATCAGCCAAAGTACGGCCGTCCTCCAGCTGTTTCCCGGCGAA 2688752 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||| ||||| | ||| | || || |||||| ||| || ||| | || Sbjct 2688753 GATGAGCCGCTGTTGGTCGGGAGGGATGCCTTCTTTGTCCTGGATTTTGGCCTTGAC-GT 2688811 Query 35665 TGCC-ACCGTGTCG---CTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 || | | ||||||| ||| || || || | ||||| ||||| || |||||||||| Sbjct 2688812 TGTCGATCGTGTCGGAACTC---TCGACTTCGAGGGTGATGGTTTTGCCGGTCAAAGTTT 2688868 Query 35721 TCACAAATATCTGCAT 35736 | ||||| || ||||| Sbjct 2688869 TGACAAAGATTTGCAT 2688884 Score = 86.0 bits (94), Expect = 6e-12 Identities = 138/197 (70%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || |||||||| ||||| || || || | | | || |||| ||||| || ||||| Sbjct 2688237 CTCTTTCTGAATGTTATAATCAGCTAAAGTCCTCCCATCCTCCAATTGCTTCCCGGCAAA 2688296 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||| || | || | | ||||| ||| |||||| ||| | | | Sbjct 2688297 GATAAGCCTTTGCTGATCTGGGGGGATTCCTTCCTTATCCTGAATCTTTGCCTTGACATT 2688356 Query 35665 TGCCACCGTGTCGCTCGA---TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | || || ||| ||||||||||| ||||| ||||| || ||||| || || Sbjct 2688357 ATCGATTGTATC---CGAACTTTCCACCTCCAAGGTGATTGTTTTTCCAGTCAAGGTCTT 2688413 Query 35722 CACAAATATCTGCATTC 35738 ||||| |||||||||| Sbjct 2688414 GACAAAAATCTGCATTC 2688430 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/197 (71%), Gaps = 9/197 (5%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACC-CGCAA 35603 |||||| || ||||||||||| |||||||| || |||| || ||||| || || ||| | Sbjct 2689149 CTCCTTCTGGATGTTGTAATCCGCCAAGGTACGGCCGTCTTCGAGCTGTTTGCCACGCGA 2689208 Query 35604 ATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAG 35663 | || | || |||||||| | || | | |||||||| |||| || || | | | Sbjct 2689209 AGATGAGCCTTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATC-TTGGCCTTAACG 2689267 Query 35664 TTG-CCACCGTGTCG---CTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 ||| | | |||||| ||| || ||||| | || || || || || |||| ||| Sbjct 2689268 TTGTCGATGGTGTCGGAACTC---TCGACCTCGAGAGTTATGGTCTTGCCGGTCAGGGTT 2689324 Query 35720 TTCACAAATATCTGCAT 35736 ||||| || |||||||| Sbjct 2689325 TTCACGAAGATCTGCAT 2689341 >seq6 Length=26303135 Score = 104 bits (114), Expect = 2e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||||||||||||||| |||| || |||||||| || ||||| Sbjct 25054068 CTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCCGTCCTCGAGCTGCTTCCCAGCAAA 25054009 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || || ||||||| || | | ||||||||| |||||| ||||| || Sbjct 25054008 GATAAGCCTTTGTTGGTCCGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 25053950 Query 35665 TG-CCACCGTGTCG---CTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 || | | ||||||| ||| || || || | ||||| || || || || | || | Sbjct 25053949 TGTCGATCGTGTCGGAACTC---TCGACTTCGAGGGTGATTGTCTTGCCGGTGAGTGTCT 25053893 Query 35721 TCACAAATATCTGCAT 35736 | || || |||||||| Sbjct 25053892 TAACGAAGATCTGCAT 25053877 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||| |||| || | || |||||| ||||| |||||||| ||| Sbjct 25054559 CCACCACGAAGGCGCAAGACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCC 25054500 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || | | || |||| ||||| || ||||||||||||| ||||| || | ||| Sbjct 25054499 AGAGTCCTTCCATCTTCCAATTGCTTCCCAGCAAATATCAACCTTTGCTGATCTGGTGGA 25054440 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | ||||||||| |||||| ||| | | | | | || || |||| ||| Sbjct 25054439 ATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTATCAATGGTATCCGAGCTC---TCC 25054383 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| || || ||||| || |||| ||| || || || |||||||| Sbjct 25054382 ACCTCCAAAGTAATGGTTTTCCCTGTCAGAGTCTTAACGAAAATCTGCAT 25054333 >seq9 Length=38630433 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | ||||| ||| | || | || |||||| || ||||||||||| || Sbjct 27803718 CCTCCACGGAGCCTCAGCACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGCA 27803659 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| | |||| |||| |||||| || || |||||||||| |||||| |||| ||| Sbjct 27803658 AGGGTCCTGCCGTCCTCCAACTGCTTCCCGGCGAATATCAACCTCTGCTGATCCGGAGGG 27803599 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGA---TTCC 35686 | | ||||| ||| ||| ||| ||| | | | | || || ||| || Sbjct 27803598 ATCCCTTCCTTATCCTGGATTTTTGCCTTGACGTTATCAATTGTATC---CGAACTCTCT 27803542 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| || || ||||| || ||||| ||||| || || |||||||| Sbjct 27803541 ACCTCCAGAGTAATAGTTTTCCCGGTCAAGGTTTTAACGAAAATCTGCAT 27803492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450791171349480