Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1 149 6e-31 seq9 134 1e-26 seq7 123 3e-23 seq5 123 3e-23 seq6 100 3e-16 >seq1 Length=37323695 Score = 149 bits (164), Expect = 6e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| || | |||||||| || ||||||||||| ||||| ||||||||| | Sbjct 32435688 CCACCCCTGAGACGGAGGACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAGTCGGCT 32435747 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| |||||||| ||||| || || || | ||| |||||||| || || Sbjct 32435748 AAGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGATCCGGTGGG 32435807 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || || || |||||| ||| | ||||| || ||||| || Sbjct 32435808 ATTCCTTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGGATTCGACC 32435867 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || ||||| || || |||| ||||| ||||| || ||||| || Sbjct 32435868 TCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTGACGAAGATCTGCATCTT 32435917 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || || |||||||||||||| || || ||| || || || || || Sbjct 11148213 GTGAAGGGTTGACTCCTTTTGAATGTTATAATCAGCAAGTGTCCTTCCATCTTCAAGTTG 11148154 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || ||||||||||| | ||||||||| || || || || ||||| || ||||| || Sbjct 11148153 TTTTCCAGCAAAAATCAACCTCTGCTGATCTGGTGGGATACCCTCTTTATCCTGAATCTT 11148094 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| ||| | ||||| || || || || | ||| || |||||||| || Sbjct 11148093 AGCCTTGACATTGTCAATAGTGTCCGAGCTCTCTACCTCCAAAGTGATCGTTTTACCTGT 11148034 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | ||| || || || |||||||| Sbjct 11148033 GAGAGTCTTGACAAAGATTTGCAT 11148010 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| || || | ||| || ||||| || ||||| |||||||| ||||| || || Sbjct 8434241 TTCCTCCCCTAAGCCTCAAAACAAGGTGAAGTGTGGACTCCTTTTGGATGTTATAATCAG 8434182 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| || | || || || || || || ||||||||||| | ||||||||| || | Sbjct 8434181 CAAGCGTTCGGCCATCTTCCAGTTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGAG 8434122 Query 134605 GTATGCCTTCTTTTTCTTGAAT 134626 | ||||||||||| || || || Sbjct 8434121 GGATGCCTTCTTTATCCTGGAT 8434100 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | || || ||||| ||||| || || || ||||| | Sbjct 11147780 CCACCACGGAGACGAAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTATAGTCAGCT 11147721 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || || ||||||||||| |||||||| | | ||||| || || || Sbjct 11147720 AGGGTTCGACCATCTTCAAGCTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCAGGAGGG 11147661 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || || ||||| ||| | || || || || || Sbjct 11147660 ATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTGTCAATAGTATCAGAGCTCTCAACC 11147601 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || |||| ||||| || || |||||||| Sbjct 11147600 TCAAGGGTGATGGTCTTGCCTGTTAGGGTTTTCACAAAGATTTGCAT 11147554 >seq9 Length=38630433 Score = 134 bits (148), Expect = 1e-26 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || || ||||||||||| || ||||| || || Sbjct 27803262 CCGCCACGGAGACGGAGTACCAGGTGGAGAGTCGATTCCTTTTGGATATTGTAATCCGCA 27803203 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || || || ||||| || || ||||| ||||| ||||| || || Sbjct 27803202 AGGGTTCGGCCGTCTTCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGATCAGGAGGA 27803143 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || ||||| || || ||||| ||| | ||||| || ||||| Sbjct 27803142 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACC 27803083 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGT 134718 ||||| || |||||||| ||||||| ||||| ||||| || ||||| |||| Sbjct 27803082 TCGAGGGTGATGGTTTTGCCGGTTAGGGTTTTCACGAAGATCTGCATCTTGT 27803031 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| | || ||| ||||| || ||||| ||||| || |||||||| || || Sbjct 27803718 CCTCCACGGAGCCTCAGCACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGCA 27803659 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| ||| || | ||| || || || || ||||| | ||||||||| || || Sbjct 27803658 AGGGTCCTGCCGTCCTCCAACTGCTTCCCGGCGAATATCAACCTCTGCTGATCCGGAGGG 27803599 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || |||||| ||||| || | ||| || || || || Sbjct 27803598 ATCCCTTCCTTATCCTGGATTTTTGCCTTGACGTTATCAATTGTATCCGAACTCTCTACC 27803539 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || |||||||| ||||| ||||| || |||||||||||||| ||||| Sbjct 27803538 TCCAGAGTAATAGTTTTCCCGGTCAAGGTTTTAACGAAAATCTGCAT 27803492 >seq7 Length=21614486 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| || ||||| || | || || || || |||||||| ||||| ||||| || Sbjct 2895778 CCTCCTCTAAGGCGCAAGACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCA 2895837 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || ||||| || || ||||||||||| | ||| || || || || Sbjct 2895838 AGTGTCCTCCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTGGG 2895897 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || |||||| ||| | |||||| || ||||| Sbjct 2895898 ATACCCTCCTTATCTTGGATCTTGGCTTTGACATTGTCAATTGTGTCAGAGCTCTCCACC 2895957 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || | ||| ||||||||||| || || ||||| || ||||| |||||| Sbjct 2895958 TCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCATT 2896005 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| || ||||| || | || || || || |||||||| ||||| ||||| || Sbjct 2882788 CCTCCTCTCAGGCGCAAAACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCA 2882847 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || ||||| || || ||||||||||| | ||| || || || || Sbjct 2882848 AGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTGGG 2882907 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || ||| || ||| | |||||| || ||||| Sbjct 2882908 ATACCCTCCTTATCTTGGATCTTGGCTTTAACGTTGTCAATTGTGTCAGAGCTCTCCACC 2882967 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || | ||| ||||||||||| || || ||||| || ||||| |||||| Sbjct 2882968 TCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCATT 2883015 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | |||||||||||| | || || || || ||||| |||||||| ||||| || Sbjct 2883244 CCACCACGGAGTCGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCA 2883303 Query 134547 ACGG-TGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || | || | || || |||||||| || |||||||| || | |||||| || || || Sbjct 2883304 AGGGTTCTGCCA-TCTTCAAGCTGTTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGTGG 2883362 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || || ||||| || || || || | || || || ||||| Sbjct 2883363 GATACCCTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCAC 2883422 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| |||||||| || || | |||||| || || || ||||| Sbjct 2883423 CTCCAAAGTGATGGTTTTCCCAGTGAGAGTTTTCACAAATATCTGCAT 2883470 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| || || | ||| || | ||| || || || |||||||| ||||| || || Sbjct 12529397 TTCCTCCCCTAAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCTG 12529338 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| || || || || ||||||||||| ||||||||||| | ||||||||| || | Sbjct 12529337 CAAGAGTTCGACCATCTTCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAG 12529278 Query 134605 GTATGCCTTCTTTTTC 134620 | || ||||| || || Sbjct 12529277 GGATTCCTTCCTTGTC 12529262 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| || || | ||| || | ||| || || || |||||||| ||||| || || Sbjct 12607095 TTCCTCCCCTAAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCTG 12607036 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| || || || || ||||||||||| ||||||||||| | ||||||||| || | Sbjct 12607035 CAAGAGTTCGACCATCCTCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAG 12606976 Query 134605 GTATGCCTTCTTTTTC 134620 | || ||||| || || Sbjct 12606975 GGATTCCTTCCTTATC 12606960 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| || || | ||| || | ||| || || || |||||||| ||||| || || Sbjct 12548023 TTCCTCCCCTAAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCTG 12547964 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| || | || || ||||||||||| ||||||||||| | ||||||||| || | Sbjct 12547963 CAAGAGTTCAACCATCTTCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAG 12547904 Query 134605 GTATGCCTTCTTTTTC 134620 | || ||||| || || Sbjct 12547903 GGATTCCTTCCTTGTC 12547888 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | || |||| ||| | ||| || || || |||||||| || ||||| || Sbjct 2896004 TTCCACCACGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATCTG 2896063 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| || || || | ||||||||| ||||| |||| | ||| ||||| || | Sbjct 2896064 CAAGCGTCCTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAG 2896123 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || || || || || ||| || ||| | || || || || | Sbjct 2896124 GGATACCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTCTCAA 2896183 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || | ||||| || || || || | |||||| || ||||||||||| Sbjct 2896184 CTTCCAAGGTAATTGTCTTTCCAGTGAGAGTTTTCACAAAAATTTGCAT 2896232 >seq5 Length=39371879 Score = 123 bits (136), Expect = 3e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTC 134563 || ||||| || || || ||||| || ||||| || || ||||| ||| || ||| || Sbjct 2688904 ACCAGGTGGAGAGTTGACTCCTTCTGGATGTTATAATCCGCCAA-GGTACGACCGTCTTC 2688962 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 ||||||||| || || || || | | ||||| ||||| || || ||||| || ||||| Sbjct 2688963 GAGCTGTTTCCCGGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTG 2689022 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || || ||||| ||| | |||||||| ||||| ||||| || |||||||| Sbjct 2689023 GATCTTGGCCTTGACGTTGTCGATCGTGTCGGAACTCTCCACTTCGAGGGTGATGGTTTT 2689082 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||| || ||||| ||||| || ||||| Sbjct 2689083 ACCGGTCAAGGTTTTGACGAAGATCTGCAT 2689112 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 ||||| | ||| | | || ||||| || || || |||||||| || || || || ||| Sbjct 2688658 CCTCCACGGAGCCTGAGGACAAGGTGGAGAGTCGACTCCTTTTGGATATTATAATCAGCC 2688717 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | ||| || |||||||| || || || || | ||||| || ||||| || Sbjct 2688718 AAAG-TACGGCCGTCCTCCAGCTGTTTCCCGGCGAAGATGAGCCGCTGTTGGTCGGGAGG 2688776 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||||||||| || || ||||| ||||| ||| | |||||||| || || Sbjct 2688777 GATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTGTCGATCGTGTCGGAACTCTCGAC 2688836 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || |||||||| ||||| |||||||| || || |||||||| Sbjct 2688837 TTCGAGGGTGATGGTTTTGCCGGTCAAAGTTTTGACAAAGATTTGCAT 2688884 Score = 105 bits (116), Expect = 7e-18 Identities = 154/214 (72%), Gaps = 3/214 (1%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTC 134563 || ||||| || || || ||||| || |||||||| || ||||| ||| | ||| || Sbjct 2689132 ACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAA-GGTACGGCCGTCTTC 2689190 Query 134564 GAGCTGTTTGCC-TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTT 134622 |||||||||||| || || || | | ||||| ||||| || || ||||| || |||| Sbjct 2689191 GAGCTGTTTGCCACGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTT 2689250 Query 134623 GAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTT 134682 | || || || || ||| | |||||||| || || |||||||| ||||| | Sbjct 2689251 GGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACCTCGAGAGTTATGGTCT 2689310 Query 134683 TACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 | ||||| | ||||| ||||| || ||||| || Sbjct 2689311 TGCCGGTCAGGGTTTTCACGAAGATCTGCATCTT 2689344 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 ||||||| | || | ||| || || || || || ||||||||||| |||||||| || | Sbjct 2688428 TTCCTCCACGAAGCCTCAAAACAAGATGAAGGGTTGATTCCTTTTGTATGTTGTAATCAG 2688487 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 |||| ||| ||| || ||||| || || || || ||||| || || || || || Sbjct 2688488 CCAA-GGTCCTCCCGTCCTCAAGCTGCTTCCCAGCGAAGATCAATCGTTGTTGGTCTGGT 2688546 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || ||||| || ||||| || || || || || | ||||| || || Sbjct 2688547 GGGATCCCTTCCTTATCTTGGATCTTGGCCTTAACGTTATCAATCGTGTCCGAGCTCTCG 2688606 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || || || || ||||| || || |||||||| Sbjct 2688607 ACCTCCAGGGTTATAGTCTTTCCTGTCAAGGTTTTGACAAAGATTTGCAT 2688656 >seq6 Length=26303135 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 || ||||| || ||||| || ||||| ||||| ||||| ||||| || |||| | | Sbjct 25054550 AGGCGCAAGACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCCAGAGTCCTT 25054491 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || || | || || || ||||| ||||| | |||||||| || || || ||||| Sbjct 25054490 CCA-TCTTCCAATTGCTTCCCAGCAAATATCAACCTTTGCTGATCTGGTGGAATCCCTTC 25054432 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || ||||| ||| || || || | || || || ||||| || | ||| Sbjct 25054431 CTTGTCCTGAATCTTTGCCTTAACATTATCAATGGTATCCGAGCTCTCCACCTCCAAAGT 25054372 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||| || || | ||| ||||||||||| ||||| Sbjct 25054371 AATGGTTTTCCCTGTCAGAGTCTTAACGAAAATCTGCAT 25054333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505395677166120