Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq7 174 1e-38 seq9 147 1e-30 seq2 125 4e-24 seq5 120 2e-22 seq1 113 3e-20 seq6 104 1e-17 >seq7 Length=21614486 Score = 174 bits (192), Expect = 1e-38 Identities = 177/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || ||||| |||||||| || || ||||||||| |||||||| |||| | Sbjct 2882788 CCTCCTCTCAGGCGCAAAACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCA 2882847 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| | | | || ||||| || || || ||||| || || | ||||||||| || || Sbjct 2882848 AGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTGGG 2882907 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | |||||||| ||| |||||| | ||||||| | ||||||||| ||||||||| Sbjct 2882908 ATACCCTCCTTATCTTGGATCTTG-GCTTTAACGTTGTCAATTGTGTCAGAGCTCTCCAC 2882966 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || |||||||| || || |||||||||||||||||||| Sbjct 2882967 CTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 2883014 Score = 174 bits (192), Expect = 1e-38 Identities = 177/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||||||| ||||| |||||||| || || ||||||||| |||||||| |||| | Sbjct 2895778 CCTCCTCTAAGGCGCAAGACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCA 2895837 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| | | | |||||||| || || || ||||| || || | ||||||||| || || Sbjct 2895838 AGTGTCCTCCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTGGG 2895897 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | |||||||| ||| |||||| | ||| || | ||||||||| ||||||||| Sbjct 2895898 ATACCCTCCTTATCTTGGATCTTG-GCTTTGACATTGTCAATTGTGTCAGAGCTCTCCAC 2895956 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || |||||||| || || |||||||||||||||||||| Sbjct 2895957 CTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 2896004 Score = 150 bits (166), Expect = 1e-31 Identities = 173/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | ||| ||||||||||||||||| || |||||| ||||||||||| |||| Sbjct 2896233 GCCACCACGAAGCCGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGC 2896292 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| |||| | |||||||| ||||| |||||||| ||||| | ||| |||||||| || Sbjct 2896293 AAGGGTTCTGCCATCTTCAAGCTGTTTTCCGGCAAAAATTAACCTCTGCTGGTCCGGTGG 2896352 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| ||| || | || || || || || || ||||||| Sbjct 2896353 GATACCCTCCTTGTC-CTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCA 2896411 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||| || || ||||| || || | ||||||||||| ||||||||| Sbjct 2896412 CCTCCAAAGTGATGGTTTTCCCAGTGAGAGTTTTCACAAATATCTGCATG 2896461 Score = 138 bits (152), Expect = 7e-28 Identities = 164/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || ||||||||||||||||| || |||||| ||||||||||| |||| ||| |||| Sbjct 2883253 AGTCGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCAAGGGTTCTG 2883312 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | |||||||| ||||| || ||||| ||||| | ||| ||||| || || | |||||| Sbjct 2883313 CCATCTTCAAGCTGTTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGGATACCCTCC 2883372 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| || | || || || || || || |||||||| |||| || Sbjct 2883373 TTGTC-CTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCACCTCCAAAGT 2883431 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || ||||| || || | ||||||||||| ||||||||| Sbjct 2883432 GATGGTTTTCCCAGTGAGAGTTTTCACAAATATCTGCATG 2883471 Score = 120 bits (132), Expect = 2e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| |||||| ||||| || ||||||||| || || ||||||| ||| || | | Sbjct 2896015 AGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATCTGCAAGCGTCCTC 2896074 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || | ||||| ||||||||||| | | |||||| || || || | || ||| Sbjct 2896075 CCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAGGGATACCTTCC 2896134 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 ||||| |||||| ||||| ||| || || ||||| ||||||| ||| Sbjct 2896135 TTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTCTCAACTTCCAAGGTA 2896194 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || || || | |||||||||||||| |||||| Sbjct 2896195 ATTGTCTTTCCAGTGAGAGTTTTCACAAAAATTTGCATG 2896233 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || |||||||| | || | ||||| ||| |||||| || || || ||||| | Sbjct 2896461 GCCACCCCTAAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCAGC 2896520 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | || || || |||||||| ||||| || | | ||||||||| || || Sbjct 2896521 AAGGGTGCGGCCATCCTCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGTGG 2896580 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCA 34657 | || ||||||||| |||||| | ||| || || ||| ||||| ||| |||| Sbjct 2896581 GATCCCTTCCTTGTCTTGGATCTTG-GCTTTGACATTATCAATAGTGTCAGAGCTTTCCA 2896639 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | ||| || || || || || | ||||||||||| |||||||| Sbjct 2896640 CCTCGAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 2896688 Score = 116 bits (128), Expect = 2e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| |||||| ||||| || ||||||||| || || ||||||| ||| || | | Sbjct 2883025 AGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATCTGCAAGCGTCCTC 2883084 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || | ||||| ||||||||||| | | |||||| || || || | || ||| Sbjct 2883085 CCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAGGGATACCTTCC 2883144 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 ||||| |||||| ||||| ||| || || ||||| ||||||| ||| Sbjct 2883145 TTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTCTCAACTTCCAAGGTA 2883204 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || || || | || ||||||||||| |||||| Sbjct 2883205 ATAGTCTTTCCAGTGAGAGTCTTCACAAAAATTTGCATG 2883243 Score = 109 bits (120), Expect = 3e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || ||||| || | || | ||||| ||| |||||| || || || ||||| | Sbjct 2883471 GCCACCCCTAAGTCGAAGAACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCAGC 2883530 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | || || || |||||||| ||||| || | | ||||||||| || || Sbjct 2883531 AAGGGTGCGGCCATCCTCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGTGG 2883590 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCA 34657 | || ||||||||| ||||| | ||| || || ||| ||||| ||| |||| Sbjct 2883591 GATCCCTTCCTTGTCTTGAATCTTA-GCTTTGACATTATCAATAGTGTCAGAGCTTTCCA 2883649 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | ||| || || || || || | ||||||||||| |||||||| Sbjct 2883650 CCTCGAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 2883698 Score = 107 bits (118), Expect = 1e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || ||||| | ||| ||||| || ||||| ||||||||| ||||||||||||| | Sbjct 12529395 CCTCCCCTAAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCTGCA 12529336 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| | |||||||| ||||| || ||||| || || | ||| || || || || Sbjct 12529335 AGAGTTCGACCATCTTCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAGGG 12529276 Query 34600 ACTCCCTCCTTGTC 34613 | ||| |||||||| Sbjct 12529275 ATTCCTTCCTTGTC 12529262 Score = 102 bits (112), Expect = 5e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || ||||| | ||| ||||| || ||||| ||||||||| ||||||||||||| | Sbjct 12548021 CCTCCCCTAAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCTGCA 12547962 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | |||||||| ||||| || ||||| || || | ||| || || || || Sbjct 12547961 AGAGTTCAACCATCTTCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAGGG 12547902 Query 34600 ACTCCCTCCTTGTC 34613 | ||| |||||||| Sbjct 12547901 ATTCCTTCCTTGTC 12547888 Score = 98.7 bits (108), Expect = 6e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || ||||| | ||| ||||| || ||||| ||||||||| ||||||||||||| | Sbjct 12607093 CCTCCCCTAAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCTGCA 12607034 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| | || ||||| ||||| || ||||| || || | ||| || || || || Sbjct 12607033 AGAGTTCGACCATCCTCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAGGG 12606974 Query 34600 ACTCCCTCCTTGTC 34613 | ||| ||||| || Sbjct 12606973 ATTCCTTCCTTATC 12606960 Score = 96.9 bits (106), Expect = 2e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||| || ||| |||||| || || || || || | || || || | || || | || Sbjct 2895573 ATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATCCTCCAACTG 2895632 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 ||||| ||||| || || | ||| ||||| || || | ||||||||||| ||| | Sbjct 2895633 CTTACCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTC-CTGAATCT 2895691 Query 34623 TTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 ||| ||| || | |||||||||| |||||| || |||| ||| || ||||| || | Sbjct 2895692 TTGCTTTCACATTGTCAATTGTGTCTGAGCTCTCAACCTCCAGGGTGATGGTTTTCCCAG 2895751 Query 34682 TTAACGTTTTCACAAAAATCTGCAT 34706 | || || || ||||| |||||||| Sbjct 2895752 TCAATGTCTTGACAAATATCTGCAT 2895776 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||| || ||| |||||| || || || || || | || || || | || || | || Sbjct 2882583 ATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATCCTCCAACTG 2882642 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || || ||||| || || | ||| ||||| || || | ||||||||||| ||| | Sbjct 2882643 CTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTC-CTGAATCT 2882701 Query 34623 TTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 ||| ||| || | ||| |||||| |||||| || |||| ||| || ||||| || | Sbjct 2882702 TTGCTTTCACATTGTCAATCGTGTCTGAGCTCTCAACCTCCAGGGTGATGGTTTTCCCAG 2882761 Query 34682 TTAACGTTTTCACAAAAATCTGCAT 34706 | || || |||||||| |||||||| Sbjct 2882762 TCAAGGTCTTCACAAATATCTGCAT 2882786 >seq9 Length=38630433 Score = 147 bits (162), Expect = 1e-30 Identities = 174/233 (75%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | ||||| | |||| |||||||| |||||||| || || ||||| | Sbjct 27803263 GCCGCCACGGAGACGGAGTACCAGGTGGAGAGTCGATTCCTTTTGGATATTGTAATCCGC 27803204 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| ||||| ||||||||||||| || ||||| || || || |||||||| || || || Sbjct 27803203 AAGGGTTCGGCCGTCTTCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGATCAGGAGG 27803144 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | || ||||||||| |||| || | || ||| | || |||||| |||||||| Sbjct 27803143 AATGCCTTCCTTGTCTTGGATC-TTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCCA 27803085 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 | || | ||| || ||||| ||||||| |||||||| || |||||||| ||| Sbjct 27803084 CCTCGAGGGTGATGGTTTTGCCGGTTAGGGTTTTCACGAAGATCTGCATCTTG 27803032 Score = 105 bits (116), Expect = 4e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || |||||| |||||| || ||||| ||||| | ||| || | |||| || | || Sbjct 27803694 TGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTCCTGCCGTCCTCCAACTGC 27803635 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| ||||| || | ||| || ||||| || | || ||||| || ||| ||| Sbjct 27803634 TTCCCGGCGAATATCAACCTCTGCTGATCCGGAGGGATCCCTTCCTTATCCTGGAT-TTT 27803576 Query 34624 TGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || || ||| || |||||| || ||||| || |||| || || ||||| ||||| Sbjct 27803575 TGCCTTGACGTTATCAATTGTATCCGAACTCTCTACCTCCAGAGTAATAGTTTTCCCGGT 27803516 Query 34683 TAACGTTTTCACAAAAATCTGCATG 34707 || ||||| || |||||||||||| Sbjct 27803515 CAAGGTTTTAACGAAAATCTGCATG 27803491 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| || || || || || | || || || |||| || || || || || || || Sbjct 27803454 TCCTTCTGGATATTGTAGTCCGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAG 27803395 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || || |||||||||||||| || | |||||||||||| |||| || | |||||| | Sbjct 27803394 ATCAATCGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATC-TTGGCCTTAACGTT 27803336 Query 34636 -AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 || ||||| ||| || ||||| | || || || || ||||||| ||||| || Sbjct 27803335 GTCGATCGTGTCAGAGCTTTCGACTTCAAGAGTGATGGTCTTGCCGGTTAGGGTTTTGAC 27803276 Query 34695 AAAAATCTGCATG 34707 || ||||||||| Sbjct 27803275 GAAGATCTGCATG 27803263 >seq2 Length=41236440 Score = 125 bits (138), Expect = 4e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||| |||||| ||| |||||| ||||||||||| || | || || || |||||||| Sbjct 32406500 ACCAGATGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCTAGGGTACGGCCGTCTTCA 32406559 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || ||||| || || | ||| ||||||||||| || | || ||||||||| | Sbjct 32406560 AGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCCGGAGGGATGCCTTCCTTGTCTTGG 32406619 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| || | || ||| | || ||||| | || || |||| |||||| || || Sbjct 32406620 ATC-TTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCGACCTCCAAGGTTATGGTCTT 32406678 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||| |||| |||||||| || ||||||||| Sbjct 32406679 ACCCGTTAGGGTTTTCACGAAGATCTGCATG 32406709 >seq5 Length=39371879 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | |||||| | |||| |||||||| |||||| || ||||||||||| | Sbjct 2688886 CCGCCACGAAGACGGAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTATAATCCGCC 2688945 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || ||||||| || ||||| ||||| || || | | || ||||| || || Sbjct 2688946 AAGGTACGACCGTCTTCGAGCTGTTTCCCGGCGAAGATGAGCCTTTGCTGGTCGGGTGGG 2689005 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || ||||||||| |||| || | || ||| | || ||||| |||||||| Sbjct 2689006 ATCCCTTCCTTGTCTTGGATC-TTGGCCTTGACGTTGTCGATCGTGTCGGAACTCTCCAC 2689064 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | ||| || ||||||||||| || ||||| || || |||||||| Sbjct 2689065 TTCGAGGGTGATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCAT 2689112 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 |||||||| ||||||||| || |||||||| | | || || |||| || || ||| Sbjct 2688682 TGGAGAGTCGACTCCTTTTGGATATTATAATCAGCCAAAGTACGGCCGTCCTCCAGCTGT 2688741 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || | ||||||||||| || || | || || ||||| ||| ||| Sbjct 2688742 TTCCCGGCGAAGATGAGCCGCTGTTGGTCGGGAGGGATGCCTTCTTTGTCCTGGAT-TTT 2688800 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | || ||||| ||||| ||||| | ||| || ||||| ||||| Sbjct 2688801 GGCCTTGACGTTGTCGATCGTGTCGGAACTCTCGACTTCGAGGGTGATGGTTTTGCCGGT 2688860 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 || ||||| ||||| || ||||| Sbjct 2688861 CAAAGTTTTGACAAAGATTTGCAT 2688884 >seq1 Length=37323695 Score = 113 bits (124), Expect = 3e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||||||||| ||| |||||| || || ||||| || | || ||||| Sbjct 11147771 AGACGAAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTATAGTCAGCTAGGGTTCGA 11147712 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | |||||||| ||||| || ||||| || | | || ||||| || || | ||| ||| Sbjct 11147711 CCATCTTCAAGCTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCAGGAGGGATTCCTTCC 11147652 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | || || | ||| || || |||||| || || | ||| Sbjct 11147651 TTGTCTTGGATC-TTAGCCTTGACATTGTCAATAGTATCAGAGCTCTCAACCTCAAGGGT 11147593 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || |||| ||||||||||| || ||||| Sbjct 11147592 GATGGTCTTGCCTGTTAGGGTTTTCACAAAGATTTGCAT 11147554 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||| || || || ||||||||||||||||||||| | | Sbjct 11148236 CCACCACGAAGACGGAGAACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAATCAGCA 11148177 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| | | |||||||||||||| || ||||| || || | ||| || || || || Sbjct 11148176 AGTGTCCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAACCTCTGCTGATCTGGTGGG 11148117 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| || || ||| || | || || | ||| ||||| |||||| || Sbjct 11148116 ATACCCTCTTTATC-CTGAATCTTAGCCTTGACATTGTCAATAGTGTCCGAGCTCTCTAC 11148058 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| || ||||||||||| || | || || ||||| || |||||| Sbjct 11148057 CTCCAAAGTGATCGTTTTACCTGTGAGAGTCTTGACAAAGATTTGCATG 11148009 Score = 105 bits (116), Expect = 4e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 34491 ACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTC 34550 |||||||||||| || || || |||||||| || ||||| || | || |||| | Sbjct 11148453 ACGCAACACCAAGTGAAGGGTAGATTCCTTTTGGATATTATAGTCAGCGAGAGTTCTTCC 11148394 Query 34551 GTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTT 34610 |||||||| || || || ||||| || | | || ||||| || || | |||||||| Sbjct 11148393 ATCTTCAAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATACCCTCCTT 11148334 Query 34611 GTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTA 34669 ||| |||| |||| || || || ||| |||||| ||||| || |||| || | Sbjct 11148333 ATCTTGGATC-TTTGCCTTCACATTATCAATGGTGTCTGAACTCTCAACCTCCAATGTGA 11148275 Query 34670 TCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || || ||||| | || ||||||||||| ||||| Sbjct 11148274 TAGTCTTTCCGGTAAGAGTCTTCACAAAAATTTGCAT 11148238 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| || ||||| || |||| || |||| | | || || || || || || ||||| Sbjct 11148656 TCCTTCTGGATGTTGTAGTCTGCCAGAGTTCTCCCATCCTCCAGCTGCTTCCCAGCAAAA 11148597 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 || || | ||| ||||| || || | ||||||||||| |||| |||| || || | Sbjct 11148596 ATCAACCTCTGCTGGTCTGGAGGGATCCCCTCCTTGTCCTGGATC-TTTGCCTTCACATT 11148538 Query 34636 A-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 | ||| |||||| ||| || || |||| ||||| || || || || || || ||||| Sbjct 11148537 ATCAATGGTGTCTGAGCTATCAACCTCCAACGTTATTGTCTTTCCAGTCAAGGTCTTCAC 11148478 Query 34695 AAAAATCTGCAT 34706 ||| |||||||| Sbjct 11148477 AAATATCTGCAT 11148466 >seq6 Length=26303135 Score = 104 bits (114), Expect = 1e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553 ||| |||||||| || || ||| || |||||||||||||| | | ||||| |||| Sbjct 25054317 CAAAACCAAATGAAGTGTCGACTCTTTCTGAATGTTATAATCAGCCAAAGTTCGACCGTC 25054258 Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 || || || || || ||||| || | | || ||||| ||||| | ||| |||||||| Sbjct 25054257 CTCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGCGGGATTCCTTCCTTGTC 25054198 Query 34614 TGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672 |||| || | || ||| | || ||||| ||| || ||||||| |||||||| Sbjct 25054197 CTGGATC-TTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCGACTTCCAGGGTTATCG 25054139 Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||| || | || || || || |||||||| Sbjct 25054138 TCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 25054105 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| ||||| |||| || || ||| |||||| ||||| || ||||| | Sbjct 25054559 CCACCACGAAGGCGCAAGACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCC 25054500 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || | | ||||| | ||| || || |||||||| || | || || || || || Sbjct 25054499 AGAGTCCTTCCATCTTCCAATTGCTTCCCAGCAAATATCAACCTTTGCTGATCTGGTGGA 25054440 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| |||||| | ||||| || ||| || || ||||||||| Sbjct 25054439 ATCCCTTCCTTGTCCTGAATCTTT-GCCTTAACATTATCAATGGTATCCGAGCTCTCCAC 25054381 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || ||||| || || | || || || ||||||||||| Sbjct 25054380 CTCCAAAGTAATGGTTTTCCCTGTCAGAGTCTTAACGAAAATCTGCAT 25054333 Score = 87.8 bits (96), Expect = 1e-12 Identities = 148/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 |||||||| |||||| || ||||| ||||| | | ||||| |||| || || || Sbjct 25054079 TGGAGAGTCGACTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCCGTCCTCGAGCTGC 25054020 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || ||||| || | | ||||||||||| || | || |||||||| |||| || Sbjct 25054019 TTCCCAGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATCCCTTCCTTGTCCTGGATC-TT 25053961 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | || ||||| ||||| ||||| | ||| || || || ||||| Sbjct 25053960 GGCCTTCACGTTGTCGATCGTGTCGGAACTCTCGACTTCGAGGGTGATTGTCTTGCCGGT 25053901 Query 34683 TAACGTTTTCACAAAAATCTGCATGTTGATTG 34714 | || || || || |||||||| ||| ||| Sbjct 25053900 GAGTGTCTTAACGAAGATCTGCATCTTGTTTG 25053869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314727946784423