Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq7 132 4e-26 seq9 131 1e-25 seq5 125 6e-24 seq6 116 3e-21 seq1 114 1e-20 >seq7 Length=21614486 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| || ||||| || || ||| ||||||| | ||||| || || Sbjct 2883243 CATGCAAATTTTTGTGAAGACTCTCACTGGAAAGACTATTACCTTGGAAGTTGAGAGTTC 2883184 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||| | || ||| || || || ||||| ||||| || || || ||||| Sbjct 2883183 TGATACCATTGACAATGTAAAAGCTAAGATCCAGGACAAGGAAGGTATCCCTCCAGATCA 2883124 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||| | | |||| ||||||||||| ||||| || | ||| || | |||||||| Sbjct 2883123 ACAGAGGCTGATATTTGCCGGCAAACAGTTGGAGGATGGGAGGACGCTTGCAGATTACAA 2883064 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| ||| | || ||||| ||||| |||| ||||| || Sbjct 2883063 TATCCAAAAGGAGTCAACCCTCCACTTGGTGCTGCGTCTGCGTGGTGGAAT 2883013 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| |||||||| || || ||| | ||||| | ||||| || || Sbjct 2896233 CATGCAAATTTTTGTGAAAACTCTCACTGGAAAGACAATTACCTTGGAAGTTGAGAGTTC 2896174 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||| | || ||| || || || ||||| ||||| || || || ||||| Sbjct 2896173 TGATACCATTGACAATGTAAAAGCTAAGATCCAGGACAAGGAAGGTATCCCTCCAGATCA 2896114 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||| | | |||| ||||||||||| ||||| || | ||| || | |||||||| Sbjct 2896113 ACAGAGGCTGATATTTGCCGGCAAACAGTTGGAGGATGGGAGGACGCTTGCAGATTACAA 2896054 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| ||| | || ||||| ||||| |||| ||||| || Sbjct 2896053 TATCCAAAAGGAGTCAACCCTCCACTTGGTGCTGCGTCTGCGTGGTGGAAT 2896003 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||||||||| |||||||| || || || | || ||| | || ||||| || Sbjct 2896461 CATGCAGATATTTGTGAAAACTCTCACTGGGAAAACCATCACTTTGGAGGTGGAGAGTTC 2896402 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | || || | || || || ||||| ||||| || || || ||||| || || Sbjct 2896401 GGATACCATCGATAATGTGAAGGCCAAGATTCAGGACAAGGAGGGTATCCCACCGGACCA 2896342 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | ||||| | ||||| ||||| | ||||| | ||| || | || || || Sbjct 2896341 GCAGAGGTTAATTTTTGCCGGAAAACAGCTTGAAGATGGCAGAACCCTTGCAGACTATAA 2896282 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| |||||||| ||| | |||||||| ||||| | || |||||||| Sbjct 2896281 CATTCAGAAGGAGTCAACCCTCCATTTGGTGTTGCGGCTTCGTGGTGGCAT 2896231 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || |||||| | || || || || |||||| || Sbjct 2883698 ATGCAGATCTTTGTGAAAACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAAAGCTCT 2883639 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| || ||||||||||| ||||| || ||||| || ||| Sbjct 2883638 GACACTATTGATAATGTCAAAGCTAAGATTCAAGACAAGGAAGGGATCCCACCAGACCAA 2883579 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || ||||| | || || | ||| || | |||||||| Sbjct 2883578 CAGAGGCTTATCTTTGCTGGTAAACAGCTAGAGGATGGCCGCACCCTTGCTGATTACAAT 2883519 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| ||| | || | ||| | || | |||||||||| Sbjct 2883518 ATCCAGAAGGAGTCCACCCTCCACCTTGTTCTTCGACTTAGGGGTGGCAT 2883469 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||||||||| |||||||| || || || | || ||| | || ||||| || Sbjct 2883471 CATGCAGATATTTGTGAAAACTCTCACTGGGAAAACCATCACTTTGGAGGTGGAGAGTTC 2883412 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | || || | || || || ||||| ||||| || || || ||||| || || Sbjct 2883411 GGATACCATCGATAATGTGAAGGCCAAGATTCAGGACAAGGAGGGTATCCCACCAGACCA 2883352 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | ||||| | || || ||||| | ||||| | ||| || | || || || Sbjct 2883351 GCAGAGGTTAATTTTTGCTGGAAAACAGCTTGAAGATGGCAGAACCCTTGCAGACTATAA 2883292 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| |||||||| ||| | |||||||| ||||| | || |||||||| Sbjct 2883291 CATTCAGAAGGAGTCAACCCTCCATTTGGTGTTGCGACTCCGTGGTGGCAT 2883241 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| |||| || || | || ||| | || ||||| || Sbjct 2896004 ATGCAGATTTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAGGTGGAGAGCTCT 2895945 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| || || ||||| || || || || ||||| || ||| Sbjct 2895944 GACACAATTGACAATGTCAAAGCCAAGATCCAAGATAAGGAGGGTATCCCACCTGACCAA 2895885 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || || | ||||| | ||| || | || || ||| Sbjct 2895884 CAGAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGGAGGACACTTGCAGACTATAAC 2895825 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202 || ||||||||||| ||| | |||||||| ||||| Sbjct 2895824 ATCCAAAAGGAGTCAACCCTGCATTTGGTCTTGCG 2895790 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| |||| || || | || ||| | || ||||| || Sbjct 2883014 ATGCAGATTTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAGGTGGAGAGCTCT 2882955 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || || ||||| || || || || ||||| || ||| Sbjct 2882954 GACACAATTGACAACGTTAAAGCCAAGATCCAAGATAAGGAGGGTATCCCACCTGACCAA 2882895 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || || | || || | ||| || | || || ||| Sbjct 2882894 CAGAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGGAGGACACTTGCAGACTATAAC 2882835 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202 || ||||||||||| ||| | |||||||||||||| Sbjct 2882834 ATCCAAAAGGAGTCAACCCTGCATTTGGTTTTGCG 2882800 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || || |||| || || | || || || || || || || Sbjct 2882786 ATGCAGATATTTGTGAAGACCTTGACTGGGAAAACCATCACCCTGGAGGTTGAGAGCTCA 2882727 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | || ||| ||| ||||| ||||| || || || || || || || Sbjct 2882726 GACACGATTGACAATGTGAAAGCAAAGATTCAGGACAAGGAGGGGATTCCTCCAGACCAG 2882667 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || ||||| || ||||| || || || | | || ||||| Sbjct 2882666 CAGAGGTTGATCTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACTCTGGCTGACTACAAT 2882607 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||| ||| | ||| | || | || | || ||||| Sbjct 2882606 ATCCAGAAGGAGTCCACCCTTCATCTTGTCCTTCGCCTCCGTGGTGG 2882560 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 27081 GACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAA 27140 ||||| ||||| || || || ||||| ||| | || || | || |||||||| | ||| Sbjct 12547888 GACAAGGAAGGAATCCCTCCTGATCAGCAGAGATTGATTTTTGCTGGCAAACAGCTTGAA 12547947 Query 27141 GACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 || ||| || || | ||||| ||||| |||||||||||||| | || ||||||||| Sbjct 12547948 GATGGTTGAACTCTTGCAGATTATAACATCCAAAAGGAGTCGACTCTTCACTTGGTTTTG 12548007 >seq9 Length=38630433 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || |||||||| | || || || || ||||| || Sbjct 27803036 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACCATCACCCTCGAGGTGGAGAGCTCA 27803095 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || |||||||| |||||||| || || |||||| Sbjct 27803096 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCTGATCAA 27803155 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||||||||| ||| | |||||| | ||| || | |||||||| Sbjct 27803156 CAGCGCTTGATCTTCGCCGGCAAGCAACTTGAAGACGGCCGAACCCTTGCGGATTACAAT 27803215 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| ||||| | || |||| | ||| | || || ||||| Sbjct 27803216 ATCCAAAAGGAATCGACTCTCCACCTGGTACTCCGTCTCCGTGGCGGCAT 27803265 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || ||||| ||||||| || |||||||||| || || || || Sbjct 27803491 CATGCAGATTTTCGTTAAAACCTTGACCGGGAAAACTATTACTCTGGAGGTAGAGAGTTC 27803550 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||| | ||||| |||||| || || || ||||| || || || ||||| Sbjct 27803551 GGATACAATTGATAACGTCAAGGCAAAAATCCAGGATAAGGAAGGGATCCCTCCGGATCA 27803610 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || |||| |||||| || || ||||| ||| | |||| || | |||||||| Sbjct 27803611 GCAGAGGTTGATATTCGCCGGGAAGCAGTTGGAGGACGGCAGGACCCTTGCGGATTACAA 27803670 Query 27167 CATTCAAAAGGAGTCGAC 27184 ||| || |||||||| || Sbjct 27803671 CATCCAGAAGGAGTCCAC 27803688 Score = 107 bits (118), Expect = 2e-18 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| || || ||||| || ||||||||| | || ||||||||||| ||| Sbjct 27803260 CGGCATGCAGATCTTCGTCAAAACCCTAACCGGCAAGACCATCACTCTTGAAGTCGAAAG 27803319 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 || ||| |||| || | || || || || |||||||| || ||||| || || || Sbjct 27803320 CTCTGACACGATCGACAACGTTAAGGCCAAGATCCAAGACAAGGAGGGCATCCCTCCGGA 27803379 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 |||||||| || || | ||| ||||| || | || ||| | ||| | | || || Sbjct 27803380 CCAACAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCGGACTA 27803439 Query 27164 CAACATTCAAAAGGAGTCGACC 27185 ||| || || ||||| || ||| Sbjct 27803440 CAATATCCAGAAGGAATCAACC 27803461 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||| || ||| | ||||| ||||| ||||| || Sbjct 27803720 ATGCAGATCTTCGTGAAGACGCTGACTGGAAAGACGATTACGCTTGAGGTGGAGAGTTCT 27803779 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || ||||||||||| || || || || ||||| ||||| Sbjct 27803780 GATACAATCGATAACGTGAAGGCGAAAATTCAAGATAAGGAGGGGATTCCACCTGATCAG 27803839 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || || |||||||| || | || || | ||||||||| Sbjct 27803840 CAGAGGCTCATTTTCGCTGGGAAGCAATTGGAGGATGGGCGTACTCTTGCAGATTACAAC 27803899 Query 27168 ATTCAAAAGGAGTCGACC 27185 || || |||||||| ||| Sbjct 27803900 ATCCAGAAGGAGTCTACC 27803917 >seq5 Length=39371879 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| |||||| |||||||||| | || || || ||||| || ||| Sbjct 2688884 ATGCAAATCTTTGTCAAAACTTTGACCGGCAAAACCATCACCCTCGAAGTCGAGAGTTCC 2688825 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| ||||| || |||||||||||||| || ||||| ||| Sbjct 2688824 GACACGATCGACAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATCCCTCCCGACCAA 2688765 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| ||||| |||| ||| | || | | ||||| || Sbjct 2688764 CAGCGGCTCATCTTCGCCGGGAAACAGCTGGAGGACGGCCGTACTTTGGCTGATTATAAT 2688705 Query 27168 ATTCAAAAGGAGTCGAC 27184 || |||||||||||||| Sbjct 2688704 ATCCAAAAGGAGTCGAC 2688688 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| ||||| |||| || ||| |||| || || || || || || Sbjct 2688657 CATGCAAATCTTTGTCAAAACCTTGACAGGAAAGACTATAACCCTGGAGGTCGAGAGCTC 2688598 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| ||||||| | || || || || ||||| || ||||| || ||||| || || Sbjct 2688597 GGACACGATTGATAACGTTAAGGCCAAGATCCAAGATAAGGAAGGGATCCCACCAGACCA 2688538 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| || || || | ||| || || || | || ||| | |||| | | |||||||| Sbjct 2688537 ACAACGATTGATCTTCGCTGGGAAGCAGCTTGAGGACGGGAGGACCTTGGCTGATTACAA 2688478 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 ||| |||||||| || ||| | ||| | |||||| Sbjct 2688477 CATACAAAAGGAATCAACCCTTCATCTTGTTTTG 2688444 Score = 107 bits (118), Expect = 2e-18 Identities = 163/231 (71%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| |||||||||||| | || ||||| || || || ||| Sbjct 2689341 ATGCAGATCTTCGTGAAAACCCTGACCGGCAAGACCATAACTCTCGAGGTCGAGAGTTCC 2689282 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || |||||||| ||||| || |||||||| || Sbjct 2689281 GACACCATCGACAACGTTAAGGCCAAGATCCAAGACAAGGAAGGGATCCCACCCGACCAG 2689222 Query 27108 CAGCGTTTAATATACGC-CGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || | | || | ||| |||||||| | |||||| | ||| | | |||||||| Sbjct 2689221 CAAAGGCTCATCTTCGCGTGGCAAACAGCTCGAAGACGGCCGTACCTTGGCGGATTACAA 2689162 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || ||||||||||| | || |||| | ||| | || || || || Sbjct 2689161 CATCCAGAAGGAGTCGACTCTCCACCTGGTCCTCCGTCTTCGTGGCGGTAT 2689111 >seq6 Length=26303135 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || |||||||| || || | |||||| | || ||||| || Sbjct 25054333 ATGCAGATTTTCGTTAAGACTCTGACAGGGAAAACCATTACTTTGGAGGTGGAGAGCTCG 25054392 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || ||| ||||| ||||| ||||| || ||||| ||||| Sbjct 25054393 GATACCATTGATAATGTTAAGGCAAAGATTCAGGACAAGGAAGGGATTCCACCAGATCAG 25054452 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || |||| || || || ||||||||||| | ||| | | |||||||| Sbjct 25054453 CAAAGGTTGATATTTGCTGGGAAGCAATTGGAAGATGGAAGGACTCTGGCTGATTACAAT 25054512 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| |||||||| ||| | || |||| ||||| | || ||||| Sbjct 25054513 ATTCAGAAGGAGTCCACCCTTCACCTGGTCTTGCGCCTTCGTGGTGG 25054559 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||||||| | || || || ||||| || ||| Sbjct 25053877 ATGCAGATCTTCGTTAAGACACTCACCGGCAAGACAATCACCCTCGAAGTCGAGAGTTCC 25053936 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || || || ||||| ||||| || ||||| || ||| Sbjct 25053937 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCGGACCAA 25053996 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || || || || | || ||| | ||| | ||||||||||| Sbjct 25053997 CAAAGGCTTATCTTTGCTGGGAAGCAGCTCGAGGACGGCCGAACCTTGGCCGATTACAAC 25054056 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || | || | ||| | || ||||| || Sbjct 25054057 ATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTACGTGGTGGGAT 25054106 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||| || ||| | || || || ||||| ||| ||| Sbjct 25054105 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACGATAACCCTGGAAGTCGAAAGCTCC 25054164 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || ||||| ||||| || || || || || Sbjct 25054165 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGAATCCCGCCAGACCAG 25054224 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCC-GATTACAA 27166 || | | || | || || || || | || ||| || ||| | || | ||||| || Sbjct 25054225 CAAAGGCTTATCTTTGCTGGGAAGCAGCTCGAGGACGGT-CGAACTTTGGCTGATTATAA 25054283 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| || |||||||| | |||||||||||| | | || ||||| || Sbjct 25054284 CATTCAGAAAGAGTCGACACTTCATTTGGTTTTGAGGCTCCGTGGTGGGAT 25054334 >seq1 Length=37323695 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| || ||||| || || || | || ||| | || || || || Sbjct 11148009 CATGCAAATCTTTGTCAAGACTCTCACAGGTAAAACGATCACTTTGGAGGTAGAGAGCTC 11148068 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | ||||| || ||||| || ||||| || || ||||| ||||| Sbjct 11148069 GGACACTATTGACAATGTCAAGGCTAAGATTCAGGATAAAGAGGGTATCCCACCAGATCA 11148128 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | || || |||||| | ||||| | ||| || | ||||| || Sbjct 11148129 GCAGAGGTTGATTTTTGCTGGAAAACAACTTGAAGATGGAAGGACACTTGCTGATTATAA 11148188 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||||||| ||| | || |||||| | ||| | || ||||| || Sbjct 11148189 CATTCAAAAGGAGTCAACCCTTCACTTGGTTCTCCGTCTTCGTGGTGGGAT 11148239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434916056877120