Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq431 1229 0.0 >seq431 Length=160619 Score = 1229 bits (1362), Expect = 0.0 Identities = 2501/3688 (68%), Gaps = 156/3688 (4%) Strand=Plus/Minus Query 183587 GATTTCCTCACCTTTAAAGGTGGTTTGAATCCTGTAACTGGCAGTCTTTGGATGACAGAT 183646 || || || || ||| || || || |||| || ||||| |||| ||| |||| ||| Sbjct 43311 GAATTTCTTACTTTTCGTGGAGGATTAGATCCAGTGACTGGGGGTCTATGGTTGACTGAT 43252 Query 183647 ATAGCACATCATCACCTAGCAATAGCAGTTATGTTTATCATTGCAGGTCATATGTATCGC 183706 || ||||| ||||| |||| || ||| || | || | || || ||||| |||||| | Sbjct 43251 ATTGCACACCATCATTTAGCTATTGCAATTCTTTTCCTAATAGCGGGTCACATGTATAGG 43192 Query 183707 ACAAACTGGGGTATTGGTCAATCAATGAAAGAGATATTAGATGGTCAGAATGGTTTCCC- 183765 || |||||||| ||||| || | ||||| || ||||| | ||| || ||| || Sbjct 43191 ACCAACTGGGGCATTGGGCATGGCCTAAAAGATATTTTAGAGGCTCATAAAGGT--CCAT 43134 Query 183766 --ACAGGGTGTCACACACAGAGGATTATATGAATTTCTAGCAGAATCAAGACATGCACAA 183823 ||||| | || | |||| |||||||| | ||| || ||| | ||||| ||| Sbjct 43133 TTACAGGCCAAGGC-CATAAAGGACTATATGAAATCCTAACAACATCGTGGCATGCTCAA 43075 Query 183824 CTATCACTGAATCTGGCAATGCTAGGATCTATCAGTATCATAGTTTCACATCATATGTAT 183883 |||| || || | || ||| |||| ||| | | || | || | || ||||||||| Sbjct 43074 TTATCTCTTAACTTAGCTATGTTAGGCTCTTTAACCATTGTTGTAGCTCACCATATGTAT 43015 Query 183884 GCAATGCCACCTTATCCATATCTTGGTATTGAATATCCAACAGTAGTAGGATTATTCACC 183943 | ||||| |||||||||||||| | || ||| ||| ||| | | ||| ||||| Sbjct 43014 TCCATGCCCCCTTATCCATATCTAGCTACTGACTATGGTACACAACTGTCATTGTTCACA 42955 Query 183944 CATCATATGTGGATAGGTGGTTTTCTTATTGTGGGTGCATCAGCACATGCTTCAATTGCT 184003 ||||| |||||||| || || ||||| || |||||||| | || ||||| | ||| | Sbjct 42954 CATCACATGTGGATTGGCGGATTTCTCATAGTGGGTGCTGCTGCGCATGCAGCCATTTTT 42895 Query 184004 ATGATAAGAGACTATAATC---CTGTTCAACATATGGGAAATGTATTAGATAGAATACTT 184060 ||| ||||||||||| ||| || || | | | | || |||||||| | | ||| Sbjct 42894 ATGGTAAGAGACTATGATCCAACTACTCGATACAACG---ATCTATTAGATCGTGTCCTT 42838 Query 184061 AAATCTAGAGATGCAATCATCAGTCACTTGAACTGGGTATGCATCTTTTTAGGTTTTCAT 184120 | | | ||||||||||| || | ||||||||||| || ||| |||| ||||| Sbjct 42837 AGGCATCGCGATGCAATCATATCACATCTCAACTGGGTATGTATATTTCTAGGCTTTCAC 42778 Query 184121 AGTTTTGGTCTTTATATTCACAATGATATTATGAGAGCATTGGGTAGACCTAATGATCTA 184180 ||||||||| | |||||||| ||||||| ||||| || || || | || | ||| | Sbjct 42777 AGTTTTGGTTTGTATATTCATAATGATACCATGAGCGCTTTAGGGCGTCCGCAAGATATG 42718 Query 184181 TTCAGTGATACAGCAATACAATTACAACCTGTATTTGCACAGTCTGTTCAGAGATTACAT 184240 || ||||| || |||||||||||||| || ||||| || | | || | ||| Sbjct 42717 TTTTCAGATACCGCTATACAATTACAACCCGTCTTTGCTCAATGGATACAAAACACCCAT 42658 Query 184241 GCTTCATTA-----TATAATGTCT-CTGATGTATTTG-GTGGATCA-----ACC------ 184282 ||| | | | || | || ||| | | | | | | || ||| Sbjct 42657 ACTTTAGCACCCGGTGCAACGGCTCCTGGCGCAACAGCGAGCACCAGTTTGACCTGGGGA 42598 Query 184283 ---------ACAATGG---TTGGTGGTAAGATTGCTAATGCT-CCTTTTGTACTAGGTAC 184329 | ||| | ||||| || ||||| || | ||| || | |||| || Sbjct 42597 GGCGGTGATTTAGTGGCAGTGGGTGGCAAAGTTGCT-TTGTTACCTATTCCATTAGGAAC 42539 Query 184330 AGCAGACTTTATGATACATCACATACACGCTTTCCAGATTCATGTTTGTGTATTAATTCT 184389 ||||| ||| || |||||||||| || || || ||||||||| ||||| || || Sbjct 42538 CGCAGATTTTTTGGTACATCACATTCATGCATTTACGATTCATGTGACGGTATTGATACT 42479 Query 184390 TCTCAAGGGTGTTTTATACTCTAGAAACTCACAATTAATACCAGATAAGAGTAAGT-TAG 184448 || || |||||| ||| || | | ||| | || ||||| ||||| || || | | | Sbjct 42478 CCTGAAAGGTGTTCTATTTGCTCGCAGCTCGCGTTTGATACCGGATAA-AGCAAATCTTG 42420 Query 184449 GATTCAGATTCCCTTGTGATGGTCCTGGTAGAGGAGGCACTTGTCAGGTATCAGGATGGG 184508 | || | ||||||||||| || ||||| ||||| || || ||||| ||||| | |||| Sbjct 42419 GTTTTCGTTTCCCTTGTGACGGGCCTGGAAGAGGGGGGACATGTCAAGTATCCGCTTGGG 42360 Query 184509 ATCATGTATTCCTTGGTTTATTCTGGATGTATAATTGCATCTCTATAGTAATCTTCCACT 184568 ||||||| ||| | || ||||||||||||| |||| ||| || ||||||| ||||| | Sbjct 42359 ATCATGTCTTCTTAGGACTATTCTGGATGTACAATTCCATTTCGGTAGTAATATTCCATT 42300 Query 184569 TTAGTTGGAGAATGCA---AGATGTATGGGGT---------------------------- 184597 | ||||||| |||||| |||||| |||||| Sbjct 42299 TCAGTTGGAAAATGCAGTCAGATGTTTGGGGTAGTATAAGTGATCAAGGGGTGGTAACTC 42240 Query 184598 CTATCA--GGAGGTAACTTTGCTCAGAGTTCAATTACAATCAATGGATGGTTGAGAGACT 184655 ||||| ||||| || ||||| |||||||| ||||| || ||||| ||| | | || | Sbjct 42239 ATATCACGGGAGGAAATTTTGCGCAGAGTTCTATTACTATTAATGGGTGGCTCCGCGATT 42180 Query 184656 TCTTATGGTCACAGTCAAGTCAAGTTCTCAATAGTTATGG-ACAAGA-CATCAGCATGTA 184713 |||||||| |||| || || || | | |||||| | | ||| ||| || Sbjct 42179 TCTTATGGGCACAAGCATCCCAGGTAATTCAGTCTTATGGTTCTTCATTATCTGCA--TA 42122 Query 184714 TGGTTTGCTATTTCTT-GGAGCACATTTTGTATGGGCATTCAGTTTGATGTTCCTATGGA 184772 ||| | || |||||| || || |||||||||||||| || ||||| ||||| |||| | Sbjct 42121 TGGCCTTCT-TTTCTTAGGTGCTCATTTTGTATGGGCTTTTAGTTTAATGTTTCTATTCA 42063 Query 184773 GTGGTAGAGGATACTGGCAAGAGTTGATAGAGTCTATTGCTTGGGCACATAACAAATTAA 184832 | || | || || |||||||| | || || || || | |||||| ||||| ||||||| Sbjct 42062 GCGGACGTGGTTATTGGCAAGAACTTATTGAATCCATCGTTTGGGCTCATAATAAATTAA 42003 Query 184833 AACTTGCACCTACCATTCAACCAAGAGCAATGTCAATTACACAAGGACGTGCTGTTGGAG 184892 || |||| ||| | | ||| || ||||| || ||| ||||||||||||||| |||| Sbjct 42002 AAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTGTACAAGGACGTGCTGTAGGAG 41943 Query 184893 TTGCACACTTCTTACTTGGAGGTATTGCCACAACATGGGCATTCTTCTTTGCTCACCTTA 184952 | | || | | | || || || |||||||||||||||||||||||||| || ||| Sbjct 41942 TAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCATTCTTCTTAGCAAGAATTA 41883 Query 184953 TCCCCTTAAGTTAAATCATGGCTA-------CTAAAA-------------CAAAATTTCC 184992 | | ||| || ||||||| | ||| || |||||| Sbjct 41882 T----TGCAGTAGGATAATGGCTAGGAGGATTTGAAAGGCATTATGGCATTAAGATTTCC 41827 Query 184993 AAAATTTAATCAAGATTTGGCAAGTGATCCTACAACTAGGAGATTGTGGTATGGATTAGC 185052 || |||| |||| || || || || || ||| | | | |||| ||| | || Sbjct 41826 AAGGTTTAGCCAAGGATTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGC 41767 Query 185053 AACTGCACATGACTTTGAGAGTCATGACAATATGACAGAAGAGAAGT-TATATCAAAAAT 185111 || || |||||||| ||||||||||| |||| || || || | || | ||||| || Sbjct 41766 TACCGCGCATGACTTCGAGAGTCATGATGATATTACTGAGGA-ACGTCTTTATCAGAATA 41708 Query 185112 TATTTGCTACACACTTTGGTCATCTTGCAATTATCTTTCTATGGGTTGCAGGTAATTTAA 185171 | |||||| | ||||| || || | ||||| || ||||| ||| | | || ||| | Sbjct 41707 TTTTTGCTTCTCACTTCGGGCAATTAGCAATAATTTTTCTGTGGACTTCCGGAAATCTGT 41648 Query 185172 TTCATATAGCATGGCAAGGTAACTTTGAACAGTTTGTAGCAGACCCACAACATGTGATAC 185231 ||||| |||| |||||||| || ||||| | ||| || || |||||| | || Sbjct 41647 TTCATGTAGCTTGGCAAGGAAATTTTGAGGCATGGGTACAGGATCCTTTACATGTAAGAC 41588 Query 185232 CTATAGCACATAGAATATGGGATCCTCATTTTGGTCAAGGTGCAACAGATGCATACAC-A 185290 | || || ||| ||| ||||||||||||||||||||| ||| || || | || | Sbjct 41587 CGATTGCTCATGCAATTTGGGATCCTCATTTTGGTCAACCTGCTGTGGAAGCTTTTACTA 41528 Query 185291 CAGGCAGGTTCTACTTTTCCTGTGAACAGATTGTATTCTGGACTGTATCATTGGTGGTAC 185350 ||| || || || ||| ||||| | || ||||| | ||||| |||||||| Sbjct 41527 GAGG-GGGCGCTCCTGGTCCAGTGAATATCGCTTACTCTGGTGTTTATCAGTGGTGGTAT 41469 Query 185351 ACAGTTGGTATGAGAACTAATATGCAACTGTATACTGGTGGTGCATT--TATGATT--CT 185406 ||| | || | | |||||| | || ||||| || | | || ||| ||| | Sbjct 41468 ACAATCGGGTTACGTACTAATGAAGATCTTTATACGGGAGCTCTTTTTCTATTATTTCTT 41409 Query 185407 ACTAGCATTGGTATCTTTACTTGGTGCTCAATTACATCTGAAACCAAAGTTTGCACCTAA 185466 || || |||| ||| | | | | ||||| || |||| || | ||| | Sbjct 41408 TCTGCCA----TATCCTTAATAGCGGGTTGGTTACACCTACAACCGAAATGGAAACCGAG 41353 Query 185467 GCTTGCTTGGTTTAAAGATAATGAGAACAGATTAAATCATCATCTATCAGTTCTATTTGG 185526 || | ||||| ||| | || | | ||||||||| | |||| ||||| || Sbjct 41352 CGTTTCGTGGTTCAAAAACGCCGAATCTCGTCTCAATCATCATTTGTCAGGACTATTCGG 41293 Query 185527 ATTCAGTTCTATTGCATGGGCTGGTCATTTGATACACGTAGCAATACCTGCAT--CAAGA 185584 | | ||||| | || ||| | || || || | || || || || |||| || | | Sbjct 41292 AGTAAGTTCCTTGGCTTGGACAGGGCACTTAGTCCATGTCGCTATTCCTGGATCCCGGGG 41233 Query 185585 GGAATCACTGTAGATTGGACTAATTATGTGTTTATGAA--ACCTCATCCTGCAGGTTTAC 185642 ||||| ||| |||| ||||| | | | ||| | ||| ||||| ||| ||| Sbjct 41232 GGAAT--ATGTTCGATGGAATAATT-TCT-TAGATGTATTACCGCATCCCCAAGGGTTAG 41177 Query 185643 TGCCATTCTTTACAGGAAACTGGGGTGTTTATGCACAAAATCCTGATGGATTAAATCAAA 185702 ||| | ||| |||| | ||| | ||||||| ||||| || ||| | | ||| Sbjct 41176 GCCCACTTTTTTCAGGTCAGTGGAATCTTTATGCTCAAAACCCCGATTCAAGTAGTCATT 41117 Query 185703 TATTCAATACAACAGAGGGTTCTGGAACAGCAATATTAACATTCATGGGTGGTTTCCATC 185762 |||| ||| | | || || ||||| || || ||||| | | || || ||||||| Sbjct 41116 TATTTGGTACCTCCCAAGGATCAGGAACTGCCATTTTAACCCTTCTCGGGGGATTCCATC 41057 Query 185763 CACAAACAGAGGCATTATGGTTGACTGATATAGCACATCATCACCTTGCAATAGGAGTAA 185822 ||||||| | |||||| |||||||||| ||||| ||||| | || || | | | Sbjct 41056 CACAAACGCAAAGTTTATGGCTGACTGATATTGCACACCATCATTTAGCTATTGCATTTC 40997 Query 185823 TATTCATTATTGCAGGTCATATGTATAGAAGTGCTTGGGGTATTGGTCACTCAATGAAGG 185882 | || || ||||| |||||||||||||||| | | || ||||| ||| || || | Sbjct 40996 TTTTTATCATTGCTGGTCATATGTATAGAACTAACTTCGGAATTGGGCACAGTATAAAAG 40937 Query 185883 AGATACTTGAAGCACATACACCACCAAGAGGAGGACTAGGTGCAGGTCATAAAGGATTAT 185942 | | | |||||||||| || || ||||| || | || || ||||| || | | Sbjct 40936 ATCTTTTAGAAGCACATATTCCTCCGGGAGGACGATTGGGGCGTGGGCATAAGGGTCTTT 40877 Query 185943 ATGAAACAGTTACAGACTCATTACACCTACAGTTAGGTCTTGCACTTGCATCTCTAGGTG 186002 |||| ||| | | | || | || | || ||||| ||||| || || ||| |||| | Sbjct 40876 ATGACACAATCAATAATTCGATTCATTTTCAATTAGGCCTTGCTCTAGCCTCTTTAGGGG 40817 Query 186003 TTGTTACTAGTC--TGGTGGCACAACATATGTACTCAATGCCATCCTATGCTTTCATAGC 186060 || |||| ||| |||| || ||||| |||||||| | || | ||||| |||||||| Sbjct 40816 TTATTAC--GTCCTTGGTAGCTCAACACATGTACTCTTTACCTGCTTATGCGTTCATAGC 40759 Query 186061 ACAGGCGCATACTACGCAAGCTGCTCTATATGTTCATCATCAATACATTGCA--ACTGCT 186118 ||| | |||||| |||||||| ||||| ||||| |||||||| ||| | | | Sbjct 40758 ACAAGACTTTACTACTCAAGCTGCGTTATATACCCATCACCAATACATCGCAGGATTCAT 40699 Query 186119 CTGATGGTTGGTGCTTTTGCGCATGGAGCAATATTTTTTGTTAGAGACTTTGATCCTACT 186178 | ||| || |||||||| || ||||| ||||||||| ||||||| | |||| Sbjct 40698 C--ATGACAGGAGCTTTTGCCCACGGAGCTATATTTTTTATTAGAGATTACAATCCGGAA 40641 Query 186179 CTGAATAAGGACAATGTTCTTGATAGAATGCTACAGCACAAAGAAGCAATTATAAGTCAC 186238 | |||| |||| ||||| | | |||||| || | || |||||||| || ||| || Sbjct 40640 CAGAATGAGGATAATGTATTGGCAAGAATGTTAGACCATAAAGAAGCTATCATATCCCAT 40581 Query 186239 TTAAGTTGGGTATCACTATTCCTTGGATTCCATACTTTAGGAATCTATGTCCATAATGAT 186298 |||||||||| || || || |||||||||||||| ||| | ||||||||||||||| Sbjct 40580 TTAAGTTGGGCCAGCCTCTTTCTGGGATTCCATACTTTGGGACTTTATGTCCATAATGAT 40521 Query 186299 GTAGTAATGGCATTTGGTCATCCTGAGAGACAGATATTAATTGAACCTATATTTGCACAG 186358 || | | || |||||| ||| |||| ||| || || || ||||| |||||||| || Sbjct 40520 GTCATGCTTGCTTTTGGTACTCCGGAGAAACAAATCTTGATCGAACCCATATTTGCCCAA 40461 Query 186359 TGGATACAGGCAGCATCA-GGTAAGATGATGTATGGATTAAGTTTCTTACTATCTGATCC 186417 ||||| || | || ||| ||||| | ||||| || | | | ||||| | Sbjct 40460 TGGATCCAATCTGC-TCATGGTAAAACTTCATATGGGTTCGATGTACTTTTATCTTCAAC 40402 Query 186418 AAATAGTGCTGCA-------AGTCTAGCAGCAGAGAGTATGCCTGGTAATCATTACTGGA 186470 ||| | | ||| | | | |||| | || ||||||| |||| Sbjct 40401 GAATGGCCCAGCATTCAATGCGGGTCGAAGCATATGGT-TGCCTGG---------CTGGT 40352 Query 186471 TGAGTGCTATGAATGATCAAACAAACAGTCTGTTTCTACCAATAGGACCTGCTGATTTAT 186530 | | |||| | ||||| | | || || || || ||||||| |||| || || | Sbjct 40351 TAAATGCTGTTAATGAAAATAGTAATTCACTATTCTTAACAATAGGTCCTGGAGACTTCT 40292 Query 186531 TAGTTCATCATGCTATTGCACTTGGATTACATACTACAACTTTAATCCTAGTCAAGGGTG 186590 | ||||||||||||||||| || || |||||||| || || || ||| |||| ||||||| Sbjct 40291 TGGTTCATCATGCTATTGCTCTAGGTTTACATACAACTACATTGATCTTAGTAAAGGGTG 40232 Query 186591 CATTAGATGCTAGAGGTTCAAAACTCATACCAGATAAGAAAGATTTAGGATATTCATTCC 186650 | |||||||| | ||||| || | || || ||||| || ||||| || ||| || | Sbjct 40231 CTTTAGATGCGCGCGGTTCCAAGTTAATGCCGGATAAAAAGGATTTCGGTTATAGTTTTC 40172 Query 186651 CTTGTGATGGTCCAGGCAGAGGTGGTACTTGTGATAGTTCTGGTTGGGATGCTTTCTATC 186710 |||| |||||||| || |||||||||||||||||| ||| | ||||| || || ||| Sbjct 40171 CTTGCGATGGTCCGGGACGAGGTGGTACTTGTGATATTTCGGCGTGGGACGCATTTTATT 40112 Query 186711 TCTCTGTGTTCTGGGCATTCAATACAATAGCATGGGCAGATTTTTATTGGCACTGGAAGA 186770 | | || |||||| || ||||| || | ||||| |||||||||||| ||||| Sbjct 40111 TGGCAGTTTTCTGGATGTTAAATACCATTGGATGGGTTACTTTTTATTGGCATTGGAAAC 40052 Query 186771 ACCTTGCTAGTTGGCAAGGTAATCAGGCACAATTCAATACATCAGGAACATATCTTATGG 186830 || | | ||||| ||||| |||| || ||| ||| || ||| | |||| Sbjct 40051 ACATCACATTATGGCAGGGTAACGTCTCACAGTTTAATGAATCTTCCACTTATTTGATGG 39992 Query 186831 GTTGGTTCAGAGATTATCTCTGGGCGAATAGTGCGCCTGTAATCACAGGGTACACACCAT 186890 | ||||| ||||||||||| ||| || | | | | |||| ||||| | |||| Sbjct 39991 GATGGTTAAGAGATTATCTATGGTTAAACTCTTCCCAACTTATCAATGGGTATAACCCAT 39932 Query 186891 TTGGTATGAATAATCTCTCTGTATGGGCATGGATGTTCTTGTTTGGTCATTTAGTTTGGG 186950 |||||||||||| | | || || ||||| ||||||||||| ||||| ||| | ||||||| Sbjct 39931 TTGGTATGAATAGTTTATCAGTCTGGGCGTGGATGTTCTTATTTGGACATCTTGTTTGGG 39872 Query 186951 CAACAGGATTTATGTTCCTTATTTCTTGGAGAGGTTATTGGCAAGAGTTAATTGAGACTC 187010 | || |||||||||||| | ||||||||| | || ||||||||||| || ||||| ||| Sbjct 39871 CTACTGGATTTATGTTCTTAATTTCTTGGCGCGGATATTGGCAAGAATTGATTGAAACTT 39812 Query 187011 TTGCTTGGGCACATCAAAGAACTCCAATAGCAAATATAGCAGGTTGGAGAGATAAACCAG 187070 | || ||||| ||| || | || || |||| ||| | | |||||||||||||||| Sbjct 39811 TAGCATGGGCTCATGAACGCACACCTTTAGCTAATTTGATTCGATGGAGAGATAAACCAG 39752 Query 187071 TGGCACTTTCTATTGTTCAAGCAAGACTAGTTGGTTTATCACATTTTGCCATAGGATTTG 187130 |||| ||||| ||||| ||||||||| | ||||| ||| | || ||| | |||| | | Sbjct 39751 TGGCTCTTTCCATTGTGCAAGCAAGATTGGTTGGATTAGCCCACTTTTCTGTAGGTTATA 39692 Query 187131 TGCTTACCTATGCACCATTCCTGATAGC 187158 | |||| ||||| | ||| |||| || Sbjct 39691 TATTTACTTATGCGGCTTTCTTGATTGC 39664 Score = 540 bits (598), Expect = 1e-148 Identities = 652/887 (74%), Gaps = 0/887 (0%) Strand=Plus/Minus Query 189762 TTGTTGCATTTATTGCAGCACCACCTGTAGACATTGATGGCATCAGAGAGCCAGTTGCAG 189821 || |||| || ||||| || || || ||||| |||||||| || | || || ||| | | Sbjct 1467 TTATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTG 1408 Query 189822 GTTCACTTCTCTATGGTAACAACATCATTTCTGGTGCTGTTGTACCTTCATCAAATGCTA 189881 | || || || || || ||||| || ||||||||||| || | ||| | || |||| Sbjct 1407 GATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTA 1348 Query 189882 TTGGTCTACACTTCTACCCAATCTGGGAAGCAGCAACAGTAGATGAGTGGCTTTACAATG 189941 | ||| | ||||| ||||| ||||||||||| ||| | || ||||| ||| | ||||||| Sbjct 1347 TAGGTTTGCACTTTTACCCGATCTGGGAAGCGGCATCTGTTGATGAATGGTTATACAATG 1288 Query 189942 GTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAA 190001 | |||||||| || | | | | |||||| | ||||| | | |||||||| Sbjct 1287 GCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTC 1228 Query 190002 GACAGTGGGAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAG 190061 | |||||||| | | | | || |||||| | ||||||||| |||||| ||||||| Sbjct 1227 GTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATCGCTGTTGCATATTCAG 1168 Query 190062 CACCAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCT 190121 | || || | || || || || ||| | | || ||| | ||||| || || | Sbjct 1167 CTCCTGTTGCAGCTGCTGCCGCTGTTTTCTTGATCTATCCAATCGGTCAAGGAAGTTTTT 1108 Query 190122 CTGATGGTATGCCTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAG 190181 |||||||||||||| |||| ||||| ||||| |||||||||||| |||||||||| || | Sbjct 1107 CTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTG 1048 Query 190182 AACATAATATCCTTATGCACCCATTCCATATGGCAGGTGTAGCAGGTATGTTTGGTGGAG 190241 |||| || ||||||||||||||||| || ||| ||| ||||| ||| | || || || Sbjct 1047 AACACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCT 988 Query 190242 CATTATTCTCTGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTG 190301 | ||||| ||| ||||||||||| | ||||| ||| | | ||||| ||||| || | Sbjct 987 CCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAG 928 Query 190302 GTTTAGAGTCACAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACATACAACATAG 190361 || || || | ||||||| || || ||||| |||||||| || || || | Sbjct 927 AAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCG 868 Query 190362 TAGCTGCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAACAACTCAA 190421 |||||||||||||||| ||||| || | |||||||| |||||| |||||||| || Sbjct 867 TAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTC 808 Query 190422 GAAGTTTACACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTATGGTTAACATCAATGG 190481 | ||||||||||||| |||| | | |||||| || | ||||| || | | | Sbjct 807 GTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTGGGTATCTGGTTCACCGCTTTAG 748 Query 190482 GTATTTGCACAATGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATG 190541 ||||| |||| ||||| |||||| ||||||||||||| || ||||| |||||||||||| Sbjct 747 GTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATA 688 Query 190542 CACAAGGTAAAATTGTTCCAACATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGG 190601 |||||| | || || |||| ||| || ||||| | || ||||||||||||| Sbjct 687 GTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGG 628 Query 190602 AAGTAATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCT 190648 |||| ||||||||| | ||||| || |||||||| |||||||||||| Sbjct 627 AAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCT 581 Score = 378 bits (418), Expect = 9e-100 Identities = 705/1039 (68%), Gaps = 21/1039 (2%) Strand=Plus/Plus Query 190796 TTTGATGTGCTTGATGACTGGTTAAAACGTGATAGATTTGTATTCATAGGTTGGTCTGGT 190855 |||||| | | |||||||||||| | || | || || || |||||||||| || Sbjct 34753 TTTGATATTATGGATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGC 34812 Query 190856 CTTATATTATTACCATGTGCTTTCCTATCAATTGGTGGTTGGTTCACAGGAACTACATTT 190915 || | | || || ||||| | | | | || |||||||| ||||| || || ||| Sbjct 34813 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTTACAGGTACAACCTTT 34872 Query 190916 GTTACTAGTTGGTATACACATGGAATTGCATCTTCATACCTTGAAGGAGCAAACTTTTTG 190975 || ||| |||||||| |||||| | || ||| || | ||||| || || || Sbjct 34873 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAATTTCTTA 34932 Query 190976 ACAGCAGCAGTATCCACACCTGGTGATGCTATGGGTCATAGTTTATTATTCTTATGGGGT 191035 || || ||||| || || |||| | || | | | ||| ||| || || |||||||| Sbjct 34933 ACCGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGT 34992 Query 191036 CCAGAGGCACAAGGTTCATTTGTTCGTTGGTTACAAATTGGTGGACTTTGGAACTTTGTA 191095 || || |||||||| ||| |||||||| ||| | || || || |||| ||||| Sbjct 34993 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACATTTGTT 35052 Query 191096 GCACTTCATGGTGTATTTGGTCTCATAGGATTCATGTTACGTCAGTTTGAAATTGCAGGA 191155 || || || || | || || || ||||| || ||||||||||| |||||| |||| || Sbjct 35053 GCTCTCCACGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCGCGA 35112 Query 191156 TTGGTGGGTATTAGACCTTACAATGCTCTTGCTTTTTCTGCTGTCATAGCAGTTTTCACA 191215 | || | ||||||| ||||| | || || |||| | || || ||||| Sbjct 35113 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATTGCTGTTTTTGTT 35172 Query 191216 AGTGTATTCTTAATCTATCCACTTGGTCAGCACAGTTGGTTCTTTGCACCTTCATTTGGA 191275 ||||||| | || |||||||| ||||| ||||||||||||| || ||||| Sbjct 35173 TCTGTATTCCTGATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCCAGTTTTGGT 35232 Query 191276 GTTGCAGCAATCTTTAGATATATTCTATTCATTCAAGGTTTCCACAATATTACACTCAAC 191335 || ||||| || ||| ||| || || || | ||||| || || ||| ||| | ||| Sbjct 35233 GTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACATTGAAC 35292 Query 191336 CCTTTCCACATGATGGGAGTTGCAGGTATTCTAGGTGGAGCATTACTATGTGCCATTCAT 191395 || || || |||||||||||||| ||| | | || | || | ||||| || |||||| Sbjct 35293 CCATTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCTGCTCTGCTATGCGCTATTCAT 35352 Query 191396 GGTGCTACAGTACAGAACACCTTGTATGAGGACTCAAGCATCTATACAGATGGTCAAGTT 191455 |||||||| || | || || || | ||| ||||||| | | | Sbjct 35353 GGTGCTACCGTGGAAAATACTTTATTTGA------------------AGATGGTGATGGT 35394 Query 191456 CAAAGTACAACCTTTAGAGCATTTGATCCAACACAGGATGAGGAAACTTATTCTATGATC 191515 || |||| || | || ||| | ||||| || | || ||||||||||| ||| || Sbjct 35395 GCAAATACA---TTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTC 35451 Query 191516 ACTGCAAACAGATTCTGGTCACAGATATTTGGTATTGCATTCTCTAACAAAAGATTTCTA 191575 || || ||| | || ||||| || || ||||| |||| || || || ||| | | || Sbjct 35452 ACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 35511 Query 191576 CACTTCTTGATGTTGTTTGTTCCTGTAATGGGAATGTGGACATCATCAATAGGTATTGTA 191635 || ||||| ||||| ||||| || |||| || | |||| | | || | || Sbjct 35512 CATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTC 35571 Query 191636 GGTCTTGCACTTAACTTAAGAGCATATGATTTTGTATCTCAAGAGATAAGAGCAGCAGAA 191695 ||||| || || ||| || | || ||||| || || || || || || | ||||| ||| Sbjct 35572 GGTCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAA 35631 Query 191696 GACCCAGAGTTTGAAACCTTCTATACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCA 191755 || || || ||||| || ||||| || || || |||||| | || || ||||| | || Sbjct 35632 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCT 35691 Query 191756 TGGATGTCTTCAGTAGACCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTACCT 191815 |||||| | | ||| || |||||||| ||| || | ||||| ||||| |||||||| Sbjct 35692 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCC 35751 Query 191816 AGAGGAAATGCATTGTAAT 191834 | ||||| || | |||| Sbjct 35752 CGTGGAAACGCTCTTTAAT 35770 Score = 219 bits (242), Expect = 5e-52 Identities = 359/515 (70%), Gaps = 2/515 (0%) Strand=Plus/Minus Query 182847 TAGCAAAAGGACCTAAAACAACCACATGGATATGGAATTTACACGCAGATGCTCATGATT 182906 |||| || ||||| | || ||||| ||||| ||||| |||| || |||||||| |||| Sbjct 44015 TAGCTAAGGGACCCGATACTACCACTTGGATCTGGAACCTACATGCCGATGCTCACGATT 43956 Query 182907 TTGATAAGCATTCTAGTGATCTGCAAGAGAATTCAAGAAAAATATTTGCTGCACACTTTG 182966 | |||| ||| | |||||| || | |||| || | ||||||||| ||| || || | Sbjct 43955 TCGATAGCCATACCAGTGATTTGGAGGAGATCTCTCGCAAAATATTTAGTGCCCATTTCG 43896 Query 182967 CTCATCTAGGTATCATCTTTGTATGGATGAGCAGTTTCTTCTTTCAAGGTGCTAGGTTTT 183026 || || ||||||||| | ||| |||| | | | || || |||||| | |||| Sbjct 43895 GCCAACTCTCCATCATCTTTCTTTGGCTGAGTGGCATGTATTTCCACGGTGCTCGTTTTT 43836 Query 183027 CAAACTATACAGGATGGTTGGCAGACCCAACTCATGTAAAACCTGGTGCTCAAGTGGTTT 183086 | || ||| || |||| | || || ||||| | |||| | || || ||||||| Sbjct 43835 CCAATTATGAAGCATGGCTCAGCGATCCTACTCACATTGGACCTAGCGCCCAGGTGGTTT 43776 Query 183087 GGCCTATACTTGGTCAAGAGATATTGAATGGAGATCAGGGTGCAGGATATCAAGGTATTA 183146 |||| ||| | || ||||| || |||||||| ||| ||| | || | | ||| || Sbjct 43775 GGCCAATAGTAGGCCAAGAAATCTTGAATGGTGATGTGGGCGGGGGTTTCCGAGGAATAC 43716 Query 183147 GAATTACATCTGGTTTATTTCAGATGTGGAGAGCATGGGGTATAACAAATGAAACTCAAC 183206 ||| || |||||||| |||||||| ||| |||||| || ||||| | |||| |||| Sbjct 43715 AAATAACCTCTGGTTTTTTTCAGATTTGGCGAGCATCTGGAATAACTAGTGAATTACAAC 43656 Query 183207 T-AATGGCGCTAGCACTAGGTGCTTTAGTTATGGCAGCAGTTATGTTTAATGCTGGTGCA 183265 | || | | ||| | ||||| || || | || ||| | ||| || ||| ||| Sbjct 43655 TCTATTGTAC-CGCAATTGGTGCATTGGTCTTTGCGGCATTAATGCTTTTTGCCGGTTGG 43597 Query 183266 TTTCATTTTCACGTTGCTGCTCCTAAGTTATCATGGTTTCAGAATGTAGAATCTATGATG 183325 || |||| |||| || || || || || | ||||| || |||||||||||||| || Sbjct 43596 TTCCATTATCACAAAGCGGCCCCAAAATTGGCTTGGTTCCAAGATGTAGAATCTATGTTG 43537 Query 183326 AATCATCACCTTGCAGGTTTGCTTGGTCTTGGTTC 183360 ||||| || | ||||| | || || ||||| || Sbjct 43536 AATCACCATTTAGCAGGGCTACTAGGGCTTGGGTC 43502 Score = 183 bits (202), Expect = 4e-41 Identities = 189/245 (77%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 182486 ATGTCTCACGCCGTTAAAATATATGATACTTGCATTGGATGCACACAATGTGTGAAGGCT 182545 ||||| || | || ||||| |||||||| || || || || || |||||||| || Sbjct 122866 ATGTCACATTCAGTAAAAATTTATGATACATGTATAGGGTGTACTCAATGTGTCCGCGCC 122807 Query 182546 TGTCCATTGGATGTATTAGAAATGGTTCCTTGGGATGGGTGCAAAGCAAAGCAAATTGCT 182605 || || ||||| ||||||||| | ||||||||||| || ||||| |||||||||||| Sbjct 122806 TGCCCCACCGATGTGTTAGAAATGATACCTTGGGATGGATGTAAAGCTAAGCAAATTGCT 122747 Query 182606 TCCTCACCTAGAACTGAGGATTGTGTAGGATGTAAGAGATGTGAAACAGCATGTCCTACA 182665 ||| | || ||||| || || ||||| || ||||||||||||||| | || ||||| ||| Sbjct 122746 TCCGCTCCAAGAACAGAAGACTGTGTTGGTTGTAAGAGATGTGAATCCGCTTGTCCAACA 122687 Query 182666 GACTTTTTAAGTATTCGTGTTTACTTGGGTGCA-GAAACCACAAGAAGCATGGGTCTAGC 182724 || || || || |||| ||||| || | ||| ||||| || |||| ||||||||||| Sbjct 122686 GATTTCTTGAGCGTTCGAGTTTATTTATG-GCATGAAACAACTCGAAGTATGGGTCTAGC 122628 Query 182725 ATATT 182729 |||| Sbjct 122627 TTATT 122623 Score = 152 bits (168), Expect = 6e-32 Identities = 237/336 (71%), Gaps = 12/336 (4%) Strand=Plus/Minus Query 188637 ACCTGTCACAGTTCAGTATCCTTATGAAAAATTAATACCCTCAGAGAGATATAGAGGGAG 188696 |||||| || |||| || ||||||||||||||||| | |||||| | | | ||| | Sbjct 125032 ACCTGTAACTATTCAATACCCTTATGAAAAATTAATCACATCAGAGCGTTTCCGCGGGCG 124973 Query 188697 GATACACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTAT 188756 || || | ||| ||||||||||| |||||||||||||||||||| | || || ||||| Sbjct 124972 AATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGCCCTAT 124913 Query 188757 TAATTTACCTGTAGTTGATTGG------GTAATGAATAAACAAACTAAGAAGAAGGAACT 188810 || | ||||| ||||||||| | || | ||| | || || | || | || Sbjct 124912 AGATCTGCCTGTTGTTGATTGGAAATTTGAAACGGATATTCGAA-AAAAACGATTG--CT 124856 Query 188811 TAGAAATTATTCAATTGACTTTGGTGCTTGCATTTTCTGTGGGAATTGTGTAGAATACTG 188870 | ||||| ||||| || || ||| || || ||||| || || || || || || Sbjct 124855 T---AATTACAGTATTGATTTCGGAATTTGTATATTTTGTGGTAACTGCGTTGAGTATTG 124799 Query 188871 TCCAACTAACTGTCTATCCATGACAGAAGAGTATGAACTATCTGTTTTTGACAGACATCA 188930 |||||| || ||| |||| ||||| ||||| |||||||| ||| || ||| | || | Sbjct 124798 TCCAACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTACGACCGTCACGA 124739 Query 188931 ACTCAACTATGATAATGTAGCTCTTGGTAGATTACC 188966 | | || ||| || | | ||| | ||| | ||||| Sbjct 124738 ATTGAATTATAATCAAATTGCTTTGGGTCGTTTACC 124703 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 183629 AGTCTTTGGATGACAGATATAGCACATCATCACCTAGCAATAGCAGTTATGTTTATCATT 183688 ||| | ||| |||| ||||| ||||| ||||| |||| || ||| || | ||||||||| Sbjct 41045 AGTTTATGGCTGACTGATATTGCACACCATCATTTAGCTATTGCATTTCTTTTTATCATT 40986 Query 183689 GCAGGTCATATGTATCGCACAAACTGGGGTATTGGTCAATCAATGAAAGAGATATTAGA 183747 || |||||||||||| | || |||| || ||||| || || ||||| | ||||| Sbjct 40985 GCTGGTCATATGTATAGAACTAACTTCGGAATTGGGCACAGTATAAAAGATCTTTTAGA 40927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631423798185960