Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq5 167 6e-36 seq9 163 7e-35 seq6 163 7e-35 seq7 158 3e-33 seq1 158 3e-33 seq2 149 1e-30 seq431 100 7e-16 >seq5 Length=39371879 Score = 167 bits (184), Expect = 6e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| |||| ||||| || || || ||||| ||||| | |||||||| ||||| || Sbjct 2688435 ACGAAGCCTCAAAACAAGATGAAGGGTTGATTCCTTTTGTATGTTGTAATCAGCCAAGGT 2688494 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||||| || || |||||||||||||||||||| | |||||||||||| || || || || Sbjct 2688495 CCTCCCGTCCTCAAGCTGCTTCCCAGCGAAGATCAATCGTTGTTGGTCTGGTGGGATCCC 2688554 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| ||||||||||| ||| || || || ||||| ||| | || || || | Sbjct 2688555 TTCCTTATCTTGGATCTTGGCCTTAACGTTATCAATCGTGTCCGAGCTCTCGACCTCCAG 2688614 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || ||||| ||||| | || | |||||| Sbjct 2688615 GGTTATAGTCTTTCCTGTCAAGGTTTTGACAAAGATTTGCAT 2688656 Score = 167 bits (184), Expect = 6e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || || ||||||||||||||||| || || ||||||| ||| ||||| |||||||| Sbjct 2688663 ACGGAGCCTGAGGACAAGGTGGAGAGTCGACTCCTTTTGGATATTATAATCAGCCAAAGT 2688722 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || ||||| ||||| |||||||| || || ||||||||||| || || || Sbjct 2688723 ACGGCCGTCCTCCAGCTGTTTCCCGGCGAAGATGAGCCGCTGTTGGTCGGGAGGGATGCC 2688782 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| ||||| ||||| || ||| || ||||| ||||| || | || || || | Sbjct 2688783 TTCTTTGTCCTGGATTTTGGCCTTGACGTTGTCGATCGTGTCGGAACTCTCGACTTCGAG 2688842 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||| ||||||||||| | || | |||||| Sbjct 2688843 GGTGATGGTTTTGCCGGTCAAAGTTTTGACAAAGATTTGCAT 2688884 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| ||||||||||| || || || |||| || ||||| ||||| || Sbjct 2688891 ACGAAGACGGAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTATAATCCGCCAAGGT 2688950 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| ||||| ||||| |||||||| || | ||| |||||||| || || || Sbjct 2688951 ACGACCGTCTTCGAGCTGTTTCCCGGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCCC 2689010 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||||||||| ||| || ||||| ||||| || | ||||| || | Sbjct 2689011 TTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAACTCTCCACTTCGAG 2689070 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || ||||| ||||| | ||| | ||||| Sbjct 2689071 GGTGATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCAT 2689112 Score = 156 bits (172), Expect = 1e-32 Identities = 171/226 (76%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| ||||||||||| || || || |||| |||||||| ||||| || Sbjct 2689119 ACGAAGACGGAGGACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGT 2689178 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCA-GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610 | || ||||| ||||| || ||| |||||||| || | ||| |||||||| || || | Sbjct 2689179 ACGGCCGTCTTCGAGCTGTTTGCCACGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCC 2689238 Query 225611 CTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 ||||||||||||||||||| ||| || ||||||||||| || | || || || | Sbjct 2689239 CTTCCTTGTCTTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACCTCGA 2689298 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || |||||||| |||| ||||| | ||| | ||||| || Sbjct 2689299 GAGTTATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATCTT 2689344 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| || || ||||| || | || ||||| || ||||| |||||||| Sbjct 2688217 AGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTATAATCAGCTAAAGTCCTCCCATCC 2688276 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||||| || |||||||| | ||| || || || || || |||||||| || Sbjct 2688277 TCCAATTGCTTCCCGGCAAAGATAAGCCTTTGCTGATCTGGGGGGATTCCTTCCTTATCC 2688336 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || |||||| ||| ||| ||||| || || || ||||||| || || ||||| || Sbjct 2688337 TGAATCTTTGCCTTGACATTATCGATTGTATCCGAACTTTCCACCTCCAAGGTGATTGTT 2688396 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || ||||| || || | || | |||||| Sbjct 2688397 TTTCCAGTCAAGGTCTTGACAAAAATCTGCATT 2688429 >seq9 Length=38630433 Score = 163 bits (180), Expect = 7e-35 Identities = 165/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||||||||| ||||| ||||||| ||||||||| || | |||| || ||| Sbjct 27803247 AGTACCAGGTGGAGAGTCGATTCCTTTTGGATATTGTAATCCGCAAGGGTTCGGCCGTCT 27803188 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || |||||||| | || ||||| || || ||||| |||||||||||| Sbjct 27803187 TCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCT 27803128 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||||||| | ||||| || | ||||| || Sbjct 27803127 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCGAGGGTGATGGTT 27803068 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || | ||||| | ||| | ||||| || Sbjct 27803067 TTGCCGGTTAGGGTTTTCACGAAGATCTGCATCTT 27803033 Score = 150 bits (166), Expect = 4e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || || || |||||||| || || ||||| || |||| |||||| || |||| || Sbjct 27803484 CGCAGCCTGAGCACAAGGTGAAGGGTTGATTCCTTCTGGATATTGTAGTCCGCCAGGGTG 27803425 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| ||||||||||| | ||| |||||||| || || || || Sbjct 27803424 CGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCCGGAGGGATGCCC 27803365 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| ||| || ||||| ||||| ||| |||| || || | Sbjct 27803364 TCCTTGTCTTGGATCTTGGCCTTAACGTTGTCGATCGTGTCAGAGCTTTCGACTTCAAGA 27803305 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | ||||| | ||| | ||||| Sbjct 27803304 GTGATGGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCAT 27803264 Score = 123 bits (136), Expect = 6e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||||||||||| || || || || || |||| |||||||| || | ||| Sbjct 27803940 CGAAGCCGAAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCTGCAAGAGTA 27803881 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||| || | |||||||||||||| || || | || || || || ||||| || Sbjct 27803880 CGCCCATCCTCCAATTGCTTCCCAGCGAAAATGAGCCTCTGCTGATCAGGTGGAATCCCC 27803821 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||| ||||| || || |||||| ||||| || || || | ||||| || | | Sbjct 27803820 TCCTTATCTTGAATTTTCGCCTTCACGTTATCGATTGTATCAGAACTCTCCACCTCAAGC 27803761 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| || |||| || || | ||| | ||||| Sbjct 27803760 GTAATCGTCTTTCCAGTCAGCGTCTTCACGAAGATCTGCAT 27803720 >seq6 Length=26303135 Score = 163 bits (180), Expect = 7e-35 Identities = 165/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||||||||| || || || |||| |||||||||||||| |||| || || Sbjct 25054088 AGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCCGTCC 25054029 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||||||||| |||||||| | ||||||||| || || || ||||||||||| Sbjct 25054028 TCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATCCCTTCCTTGTCC 25053969 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||| ||||| || | || || || | ||||| ||| Sbjct 25053968 TGGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAACTCTCGACTTCGAGGGTGATTGTC 25053909 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || | || || | ||| | ||||| || Sbjct 25053908 TTGCCGGTGAGTGTCTTAACGAAGATCTGCATCTT 25053874 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || |||| || | || || || || ||||| || | || ||||| |||||||| Sbjct 25054326 ACGGAGCCTCAAAACCAAATGAAGTGTCGACTCTTTCTGAATGTTATAATCAGCCAAAGT 25054267 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || || || |||||||||||||| |||||||| | ||| ||||| ||||| || || Sbjct 25054266 TCGACCGTCCTCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGCGGGATTCC 25054207 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| |||||| ||||||||||| ||| |||| || || | Sbjct 25054206 TTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCGACTTCCAG 25054147 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| ||||||| || || | ||| | ||||| Sbjct 25054146 GGTTATCGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 25054105 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || ||| ||||| || ||||| || || || | ||||||||| |||| ||| Sbjct 25054554 ACGAAGGCGCAAGACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCCAGAGT 25054495 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||| | ||||||||||| || || | | ||| || || || ||||| || Sbjct 25054494 CCTTCCATCTTCCAATTGCTTCCCAGCAAATATCAACCTTTGCTGATCTGGTGGAATCCC 25054435 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| || |||||| ||| ||| || ||||| || ||| | ||||| || || Sbjct 25054434 TTCCTTGTCCTGAATCTTTGCCTTAACATTATCAATGGTATCCGAGCTCTCCACCTCCAA 25054375 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || |||| ||| || | ||| | ||||| Sbjct 25054374 AGTAATGGTTTTCCCTGTCAGAGTCTTAACGAAAATCTGCAT 25054333 >seq7 Length=21614486 Score = 158 bits (174), Expect = 3e-33 Identities = 153/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| ||||| || || |||| ||||||||| || | || | ||||| Sbjct 2896477 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCAGCAAGGGTGCGGCCATCC 2896536 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 |||||||| || ||||| |||||||| | |||||||| || || || |||||||||||| Sbjct 2896537 TCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCT 2896596 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| || ||| || || ||||| ||| ||||||| || | ||||| ||| Sbjct 2896597 TGGATCTTGGCTTTGACATTATCAATAGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTC 2896656 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| || | ||||| Sbjct 2896657 TTGCCAGTAAGGGTTTT 2896673 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 ||||| || ||||||||||| ||||| || || |||| ||||||||| || | || | Sbjct 2883480 AAGTCGAAGAACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCAGCAAGGGTGCG 2883539 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 ||||| |||||||| || ||||| |||||||| | |||||||| || || || ||||| Sbjct 2883540 GCCATCCTCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCTTC 2883599 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 ||||||||| ||||| || ||| || || ||||| ||| ||||||| || | || Sbjct 2883600 CTTGTCTTGAATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCCACCTCGAGGGT 2883659 Query 225675 GATCGTCTTGCCCGTCAAAGTTTT 225698 ||| |||||||| || | ||||| Sbjct 2883660 GATGGTCTTGCCAGTAAGGGTTTT 2883683 Score = 122 bits (134), Expect = 2e-22 Identities = 159/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 ||| | || ||| | || || || || || ||||||| || || || || | || || Sbjct 2895786 AAGGCGCAAGACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCAAGTGTCCT 2895845 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 ||||||||| |||||||| ||||| || || | | |||||||| || || ||||| || Sbjct 2895846 CCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTGGGATACCCTC 2895905 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 ||| ||||||||||| || ||| || || ||||| ||| | ||||| || || || Sbjct 2895906 CTTATCTTGGATCTTGGCTTTGACATTGTCAATTGTGTCAGAGCTCTCCACCTCCAAAGT 2895965 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||| || || || ||||| ||||| | || | |||||| Sbjct 2895966 GATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCATT 2896005 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || | |||||| || || || ||||||| ||||||||| || | || Sbjct 2896011 ACGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATCTGCAAGCGT 2896070 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 |||||||| || | ||| || || || || || || | ||||| || || || ||||| Sbjct 2896071 CCTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAGGGATACC 2896130 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| || ||| || ||||| || || | || || || || Sbjct 2896131 TTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTCTCAACTTCCAA 2896190 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || || | |||||| | || | |||||| Sbjct 2896191 GGTAATTGTCTTTCCAGTGAGAGTTTTCACAAAAATTTGCAT 2896232 Score = 116 bits (128), Expect = 9e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || | |||||| || || || ||||||| ||||||||| || | || Sbjct 2883021 ACGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATCTGCAAGCGT 2883080 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 |||||||| || | ||| || || || || || || | ||||| || || || ||||| Sbjct 2883081 CCTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAGGGATACC 2883140 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| || ||| || ||||| || || | || || || || Sbjct 2883141 TTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTCTCAACTTCCAA 2883200 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || || | ||| || | || | |||||| Sbjct 2883201 GGTAATAGTCTTTCCAGTGAGAGTCTTCACAAAAATTTGCAT 2883242 Score = 114 bits (126), Expect = 3e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || || || || ||||||| || || || || | || |||||||| || |||||| Sbjct 2882812 TGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCATCCTCAAGCTGC 2882871 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| || || | | |||||||| || || ||||| ||||| ||||||||| || Sbjct 2882872 TTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTGGGATACCCTCCTTATCTTGGATC-TT 2882930 Query 225631 TGCTTCACAGCT-TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 |||| | | | || || ||||| ||| | ||||| || || ||||| || || || || Sbjct 2882931 GGCTTTAACGTTGTCAATTGTGTCAGAGCTCTCCACCTCCAAAGTGATGGTTTTACCAGT 2882990 Query 225690 CAAAGTTTTTATGAACACTTGCATT 225714 ||| ||||| | || | |||||| Sbjct 2882991 CAAGGTTTTCACAAAAATCTGCATT 2883015 Score = 84.2 bits (92), Expect = 5e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 ||| |||| || | ||| ||||| || || ||||||| || ||||| || | ||||| Sbjct 12529387 AAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCTGCAAGAGTTCG 12529328 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||| ||||| || ||||| || || | || || || || || || || ||||| Sbjct 12529327 ACCATCTTCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAGGGATTCCTTC 12529268 Query 225615 CTTGTC 225620 |||||| Sbjct 12529267 CTTGTC 12529262 Score = 84.2 bits (92), Expect = 5e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554 ||| |||| || | ||| ||||| || || ||||||| || ||||| || | ||||| Sbjct 12548013 AAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCTGCAAGAGTTCA 12547954 Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 |||||||| ||||| || ||||| || || | || || || || || || || ||||| Sbjct 12547953 ACCATCTTCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAGGGATTCCTTC 12547894 Query 225615 CTTGTC 225620 |||||| Sbjct 12547893 CTTGTC 12547888 >seq1 Length=37323695 Score = 158 bits (174), Expect = 3e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || ||||| || | |||||||| || |||| ||||| || |||| ||| Sbjct 11148687 ACGAAGGCGAAGAACAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGAGT 11148628 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||||||||| || |||||||||||||| || || | | || ||||| || || || || Sbjct 11148627 TCTCCCATCCTCCAGCTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGGATCCC 11148568 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| ||||||||| ||||||| || |||||||||||| | || || || || Sbjct 11148567 CTCCTTGTCCTGGATCTTTGCCTTCACATTATCAATGGTGTCTGAGCTATCAACCTCCAA 11148508 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||| || ||||| || ||||| || || Sbjct 11148507 CGTTATTGTCTTTCCAGTCAAGGTCTT 11148481 Score = 156 bits (172), Expect = 1e-32 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| || || ||||| ||||||| ||| || || || | |||||| |||||||| ||||| Sbjct 11148441 GTGAAGGGTAGATTCCTTTTGGATATTATAGTCAGCGAGAGTTCTTCCATCTTCAAGCTG 11148382 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| ||||| ||||| || | ||| ||||| || || ||||| ||||| ||||||||||| Sbjct 11148381 CTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATACCCTCCTTATCTTGGATCTT 11148322 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 | ||||||| || ||||||||||| | || || || || ||||| ||||| || || Sbjct 11148321 TGCCTTCACATTATCAATGGTGTCTGAACTCTCAACCTCCAATGTGATAGTCTTTCCGGT 11148262 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 | ||| || | || | |||||| Sbjct 11148261 AAGAGTCTTCACAAAAATTTGCAT 11148238 Score = 154 bits (170), Expect = 4e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || |||||||| || || | |||||| ||||| || || | || ||| Sbjct 32435703 AGGACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAGTCGGCTAAGGTGCGGCCGTCT 32435762 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || ||||| || || || || || ||||||||||| Sbjct 32435763 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGATCCGGTGGGATTCCTTCCTTGTCC 32435822 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| || ||| ||||||||||| |||| ||| || |||| || || ||| Sbjct 32435823 TGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGGATTCGACCTCTAGGGTTATGGTC 32435882 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || ||||| | ||||| | ||| | ||||| || Sbjct 32435883 TTCCCCGTTAGGGTTTTGACGAAGATCTGCATCTT 32435917 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 ||||| ||||| || || |||| ||| || || || | |||| |||||||| ||||| Sbjct 11147756 TGGAGGGTGGACTCCTTCTGGATATTATAGTCAGCTAGGGTTCGACCATCTTCAAGCTGT 11147697 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| || ||||| | ||| ||||| || || || |||||||||||||||||||| Sbjct 11147696 TTGCCAGCAAAAATAAGCCTTTGCTGGTCAGGAGGGATTCCTTCCTTGTCTTGGATCTTA 11147637 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| ||| || || || || ||| | || || || | ||||| |||||||| || Sbjct 11147636 GCCTTGACATTGTCAATAGTATCAGAGCTCTCAACCTCAAGGGTGATGGTCTTGCCTGTT 11147577 Query 225691 AAAGTTTTTATGAACACTTGCAT 225713 | ||||| | || | |||||| Sbjct 11147576 AGGGTTTTCACAAAGATTTGCAT 11147554 Score = 114 bits (126), Expect = 3e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || | || || ||||| || || |||| ||| || || || | || Sbjct 11148002 CGAAGACGAAGCACCAAATGAAGGGTGGACTCCTTCTGGATATTATAGTCAGCTAGGGTG 11147943 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || ||||| ||||| || ||||| |||||||||| |||||| || || || || ||| Sbjct 11147942 CGACCGTCTTCAAGCTGTTTGCCAGCAAAGATAAGTCTTTGTTGATCAGGAGGGATTCCT 11147883 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| || ||| || || || || ||| | || || || || Sbjct 11147882 TCCTTGTCTTGGATCTTCGCTTTAACATTGTCAATAGTATCAGAGCTCTCAACCTCCAAG 11147823 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | || || | || | |||||| Sbjct 11147822 GTGATAGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 11147782 >seq2 Length=41236440 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || ||||| ||||| || || || | || || ||||| | || | || ||| Sbjct 32406497 AGGACCAGATGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCTAGGGTACGGCCGTCT 32406556 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || ||||||||||| || || || |||||||||||| Sbjct 32406557 TCAAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCCGGAGGGATGCCTTCCTTGTCT 32406616 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| |||| ||| || || || || || ||| Sbjct 32406617 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCGACCTCCAAGGTTATGGTC 32406676 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| | ||||| | ||| | ||||| Sbjct 32406677 TTACCCGTTAGGGTTTTCACGAAGATCTGCAT 32406708 >seq431 Length=160619 Score = 100 bits (110), Expect = 7e-16 Identities = 99/127 (78%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795 ||||||| ||||| || || ||| ||||||||||||| ||||||||||| | | | Sbjct 107133 TGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 107074 Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854 |||||| || |||||||||| | |||||| |||| | | |||| || ||| || |||| Sbjct 107073 CCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGC 107014 Query 7855 GTTAGCT 7861 ||||||| Sbjct 107013 GTTAGCT 107007 Score = 100 bits (110), Expect = 7e-16 Identities = 99/127 (78%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795 ||||||| ||||| || || ||| ||||||||||||| ||||||||||| | | | Sbjct 142820 TGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 142879 Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854 |||||| || |||||||||| | |||||| |||| | | |||| || ||| || |||| Sbjct 142880 CCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGC 142939 Query 7855 GTTAGCT 7861 ||||||| Sbjct 142940 GTTAGCT 142946 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/104 (81%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 6769 GAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAGC 6826 ||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||||| Sbjct 106466 GAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAGC 106524 Query 6827 AGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870 ||||| |||| || |||||||||||||| ||| ||| |||| Sbjct 106525 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATG 106568 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/104 (81%), Gaps = 3/104 (3%) Strand=Plus/Minus Query 6769 GAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAGC 6826 ||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||||| Sbjct 143487 GAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAGC 143429 Query 6827 AGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870 ||||| |||| || |||||||||||||| ||| ||| |||| Sbjct 143428 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATG 143385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192524614619114