Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq6 150 4e-31 seq9 149 1e-30 seq5 147 5e-30 seq7 140 7e-28 seq1 132 1e-25 seq2 111 4e-19 >seq6 Length=26303135 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || ||||| ||||| || ||||||||||||||||| || |||| || || Sbjct 25054089 GAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCCGTC 25054030 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || ||||| || ||||||||||| || ||||||| | ||| |||||||| || Sbjct 25054029 CTCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATCCCTTCCTTGTC 25053970 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || || | || | |||| |||||||| ||||| || || || || Sbjct 25053969 CTGGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAACTCTCGACTTCGAGGGTGATTGT 25053910 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| ||||| ||||| ||||||| |||||| || Sbjct 25053909 CTTGCCGGTGAGTGTCTTAACGAAGATCTGCATCTT 25053874 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 |||||| || |||||||| || ||||| ||||| || ||||||| || || || || Sbjct 25054308 ATGAAGTGTCGACTCTTTCTGAATGTTATAATCAGCCAAAGTTCGACCGTCCTCGAGCTG 25054249 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||||| || ||||||||||| |||||||| | || |||||||||||| || || || || Sbjct 25054248 CTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGCGGGATTCCTTCCTTGTCCTGGATCTT 25054189 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 || || | || | | |||| || || || ||||| || || || || || ||||| Sbjct 25054188 GGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCGACTTCCAGGGTTATCGTCTTACCCGT 25054129 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| ||||||| |||||| Sbjct 25054128 CAGGGTCTTGACGAAGATCTGCAT 25054105 >seq9 Length=38630433 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| ||||| |||||||| || |||||||||||||| || | ||| | |||||| Sbjct 27803931 AGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCTGCAAGAGTACGCCCATCC 27803872 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | ||||| ||||| || ||||||||||| || | | || || ||||| ||| Sbjct 27803871 TCCAATTGCTTCCCAGCGAAAATGAGCCTCTGCTGATCAGGTGGAATCCCCTCCTTATCT 27803812 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| || || | || | | || |||||||| || ||||| ||||| || Sbjct 27803811 TGAATTTTCGCCTTCACGTTATCGATTGTATCAGAACTCTCCACCTCAAGCGTAATCGTC 27803752 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||||||||||| |||||| Sbjct 27803751 TTTCCAGTCAGCGTCTTCACGAAGATCTGCAT 27803720 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| || || ||||| |||||||| ||||| || |||||||||||||| || | || || Sbjct 27803710 GAGCCTCAGCACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTCCT 27803651 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || | ||||||||||| || | ||||||||| |||| | ||| ||||| Sbjct 27803650 GCCGTCCTCCAACTGCTTCCCGGCGAATATCAACCTCTGCTGATCCGGAGGGATCCCTTC 27803591 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || |||||| ||||| | || | | || ||||||||||| || ||||| Sbjct 27803590 CTTATCCTGGATTTTTGCCTTGACGTTATCAATTGTATCCGAACTCTCTACCTCCAGAGT 27803531 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||| || || | || || ||||| | |||||| Sbjct 27803530 AATAGTTTTCCCGGTCAAGGTTTTAACGAAAATCTGCAT 27803492 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || ||||| || || |||||||| |||||||| || | |||| Sbjct 27803254 GAGACGGAGTACCAGGTGGAGAGTCGATTCCTTTTGGATATTGTAATCCGCAAGGGTTCG 27803195 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || ||||||||||| | | ||| || || | | || ||||| Sbjct 27803194 GCCGTCTTCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGATCAGGAGGAATGCCTTC 27803135 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||| | || | | ||||||| ||||| || || || || Sbjct 27803134 CTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCGAGGGT 27803075 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || |||||||| || || || |||||||||| |||||| || Sbjct 27803074 GATGGTTTTGCCGGTTAGGGTTTTCACGAAGATCTGCATCTT 27803033 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 || ||||| ||||| ||||| || || || || ||||| ||||| || || | || | Sbjct 27803481 AGCCTGAGCACAAGGTGAAGGGTTGATTCCTTCTGGATATTGTAGTCCGCCAGGGTGCGG 27803422 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 || || || || || || |||||||| | | ||| ||||||| | ||| || ||| Sbjct 27803421 CCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCCGGAGGGATGCCCTCC 27803362 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| || || || || | || | |||| || || || ||||||||||| Sbjct 27803361 TTGTCTTGGATCTTGGCCTTAACGTTGTCGATCGTGTCAGAGCTTTCGACTTCAAGAGTG 27803302 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || || || ||||||| |||||| Sbjct 27803301 ATGGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCAT 27803264 >seq5 Length=39371879 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| ||||||||||| || ||||| ||||| |||||||| || ||||| || ||||| | Sbjct 2688666 GAGCCTGAGGACAAGGTGGAGAGTCGACTCCTTTTGGATATTATAATCAGCCAAAGTACG 2688725 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || ||||||||||||||| |||| ||| ||||| | | ||| ||||| Sbjct 2688726 GCCGTCCTCCAGCTGTTTCCCGGCGAAGATGAGCCGCTGTTGGTCGGGAGGGATGCCTTC 2688785 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || || || ||||| ||||| | || | |||| |||||||| ||||| || || Sbjct 2688786 TTTGTCCTGGATTTTGGCCTTGACGTTGTCGATCGTGTCGGAACTCTCGACTTCGAGGGT 2688845 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || | ||| || || |||| ||||| Sbjct 2688846 GATGGTTTTGCCGGTCAAAGTTTTGACAAAGATTTGCAT 2688884 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || ||||||||||| || ||||| ||||| |||||||| |||||||| Sbjct 2688217 AGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTATAATCAGCTAAAGTCCTCCCATCC 2688276 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | |||||||| ||||||||||| ||||| || | | |||||||||||| || Sbjct 2688277 TCCAATTGCTTCCCGGCAAAGATAAGCCTTTGCTGATCTGGGGGGATTCCTTCCTTATCC 2688336 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| ||| |||||| | || | | || ||||| || || || | || || ||| Sbjct 2688337 TGAATCTTTGCCTTGACATTATCGATTGTATCCGAACTTTCCACCTCCAAGGTGATTGTT 2688396 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || | ||||| || || | ||||||| Sbjct 2688397 TTTCCAGTCAAGGTCTTGACAAAAATCTGCATT 2688429 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || ||||| ||||| || |||||||| ||||| || || || | || || Sbjct 2688900 GAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTATAATCCGCCAAGGTACGACCGTC 2688959 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || ||||||||||||||| ||||| |||||||| | | ||| |||||||| || Sbjct 2688960 TTCGAGCTGTTTCCCGGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCCCTTCCTTGTC 2689019 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || ||||| | || | |||| |||||||| ||||| || || || || Sbjct 2689020 TTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAACTCTCCACTTCGAGGGTGATGGT 2689079 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || | || || ||||||| |||||| Sbjct 2689080 TTTACCGGTCAAGGTTTTGACGAAGATCTGCAT 2689112 Score = 145 bits (160), Expect = 2e-29 Identities = 163/217 (75%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || ||||| ||||| || |||||||||||||| || || || | || || Sbjct 2689128 GAGGACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGTACGGCCGTC 2689187 Query 151952 TTCTAG-GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 ||| || ||| || |||||||| ||||| |||||||| | | ||| |||||||| | Sbjct 2689188 TTCGAGCTGTTTGCCACGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCCCTTCCTTGT 2689247 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||| || || || || | || | | |||| |||||||| || || ||||| || | Sbjct 2689248 CTTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACCTCGAGAGTTATGG 2689307 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | ||||| || || || |||||||||| |||||| || Sbjct 2689308 TCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATCTT 2689344 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 ||||||||||| || || || ||||| ||||||||||| || || || ||||| || || Sbjct 2688448 ACAAGATGAAGGGTTGATTCCTTTTGTATGTTGTAATCAGCCAAGGTCCTCCCGTCCTCA 2688507 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || ||||| |||||||| | | || ||||| | | ||| |||||||| ||||| Sbjct 2688508 AGCTGCTTCCCAGCGAAGATCAATCGTTGTTGGTCTGGTGGGATCCCTTCCTTATCTTGG 2688567 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || || || | || | |||| || ||||| || || || || ||||| || Sbjct 2688568 ATCTTGGCCTTAACGTTATCAATCGTGTCCGAGCTCTCGACCTCCAGGGTTATAGTCTTT 2688627 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | || || || |||| ||||| Sbjct 2688628 CCTGTCAAGGTTTTGACAAAGATTTGCAT 2688656 >seq7 Length=21614486 Score = 140 bits (154), Expect = 7e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| |||| || ||||| || || || ||||| || ||||| |||||||| || | || Sbjct 2883477 CCTAAGTCGAAGAACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCAGCAAGGGT 2883536 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | ||||| ||||| ||| || || |||||||||||||| ||||| | | ||| || Sbjct 2883537 GCGGCCATCCTCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCC 2883596 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 |||||| |||||||| || ||||||| | || | |||| || || || || || || Sbjct 2883597 TTCCTTGTCTTGAATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCCACCTCGAG 2883656 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || || ||||| |||| |||||| Sbjct 2883657 GGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 2883698 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || ||||| || ||||| |||||||| || | || | ||||| Sbjct 2896477 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCAGCAAGGGTGCGGCCATCC 2896536 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 ||||| ||| || || |||||||||||||| ||||| | | ||| |||||||| ||| Sbjct 2896537 TCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCT 2896596 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||||| | || | |||| || || || || || || || || || Sbjct 2896597 TGGATCTTGGCTTTGACATTATCAATAGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTC 2896656 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || ||||| |||| |||||| Sbjct 2896657 TTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 2896688 Score = 129 bits (142), Expect = 1e-24 Identities = 154/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| |||||||| |||||||| || | || |||||||| || | Sbjct 2883036 CAAG-TGGAGGGTTGACTCCTTTTGGATATTGTAATCTGCAAGCGTCCTCCCATCCTCCA 2883094 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| ||||| || || |||||||| || || | | ||| |||||||| || || | Sbjct 2883095 ACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGA 2883154 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||| ||| | || | | | || |||||||| ||||| | |||||||| || | Sbjct 2883155 TCTTAGCTTTTACATTGTCAATGGTATCAGAACTCTCAACTTCCAAGGTAATAGTCTTTC 2883214 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | |||||||||||||| || | ||||| Sbjct 2883215 CAGTGAGAGTCTTCACAAAAATTTGCAT 2883242 Score = 125 bits (138), Expect = 2e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| || || ||||| || || ||||| || || || | ||||| |||||||| || Sbjct 2896257 ATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCAAGGGTTCTGCCATCTTCAAGCTG 2896316 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| ||||| || || | |||||||||||||| | ||| || ||||| || ||||| || Sbjct 2896317 TTTTCCGGCAAAAATTAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGAATCTT 2896376 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 || ||| | || | | | || |||||||| || || | ||| || ||||| || || Sbjct 2896377 GGCCTTCACATTATCGATGGTATCCGAACTCTCCACCTCCAAAGTGATGGTTTTCCCAGT 2896436 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 |||||| ||||| || | |||||| Sbjct 2896437 GAGAGTTTTCACAAATATCTGCAT 2896460 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||||||||| || ||||| || ||||| ||||| || || | ||| | ||||| Sbjct 2882575 AGGACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATCC 2882634 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || || ||||| | |||||||||||| | | || || ||||| || Sbjct 2882635 TCCAACTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCC 2882694 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| ||| ||| ||| | || | ||||||| ||||| || || || || || ||| Sbjct 2882695 TGAATCTTTGCTTTCACATTGTCAATCGTGTCTGAGCTCTCAACCTCCAGGGTGATGGTT 2882754 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | |||||||| || | |||||| Sbjct 2882755 TTCCCAGTCAAGGTCTTCACAAATATCTGCAT 2882786 Score = 116 bits (128), Expect = 9e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| || || ||||| || || ||||| || || || | ||||| |||||||| || Sbjct 2883267 ATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCAAGGGTTCTGCCATCTTCAAGCTG 2883326 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || || || | |||||||||||| | | ||| || ||||| || ||||| || Sbjct 2883327 TTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGAATCTT 2883386 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 || ||| | || | | | || |||||||| || || | ||| || ||||| || || Sbjct 2883387 GGCCTTCACATTATCGATGGTATCCGAACTCTCCACCTCCAAAGTGATGGTTTTCCCAGT 2883446 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 |||||| ||||| || | |||||| Sbjct 2883447 GAGAGTTTTCACAAATATCTGCAT 2883470 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||||||||| || ||||| || ||||| ||||| || || | ||| | ||||| Sbjct 2895565 AGGACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATCC 2895624 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || || ||||| | |||||||||||| | | || || ||||| || Sbjct 2895625 TCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCC 2895684 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| ||| ||| ||| | || | ||||||| ||||| || || || || || ||| Sbjct 2895685 TGAATCTTTGCTTTCACATTGTCAATTGTGTCTGAGCTCTCAACCTCCAGGGTGATGGTT 2895744 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | ||||| || || | |||||| Sbjct 2895745 TTCCCAGTCAATGTCTTGACAAATATCTGCAT 2895776 Score = 113 bits (124), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||| | ||| || || ||||| ||||||||||| || || || | || ||||||||||| Sbjct 2895795 GACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCATCTTC 2895854 Query 151955 TAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || ||||| || || || || | |||||| ||||| | | ||| || ||||| ||| Sbjct 2895855 AAGCTGCTTT--CCAGCAAAAATCAACCTCTGTTGGTCAGGTGGGATACCCTCCTTATCT 2895912 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||||| | || | |||| || ||||| || || | ||| || ||| Sbjct 2895913 TGGATCTTGGCTTTGACATTGTCAATTGTGTCAGAGCTCTCCACCTCCAAAGTGATGGTT 2895972 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || | || ||||| || | ||||||| Sbjct 2895973 TTACCAGTCAAGGTTTTCACAAAAATCTGCATT 2896005 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--G 151958 ||| || || ||||| ||||||||||| || || || | || |||||||| || || | Sbjct 2882811 ATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCATCCTCAAGCTG 2882870 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 |||| || || || || | |||||| ||||| | | ||| || ||||| ||||| || Sbjct 2882871 CTTT--CCAGCAAAAATCAACCTCTGTTGGTCAGGTGGGATACCCTCCTTATCTTGGATC 2882928 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 || ||| || | || | |||| || ||||| || || | ||| || ||||| || Sbjct 2882929 TTGGCTTTAACGTTGTCAATTGTGTCAGAGCTCTCCACCTCCAAAGTGATGGTTTTACCA 2882988 Query 152079 GTGAGAGTCTTCACGAAGACCTGCATT 152105 || | || ||||| || | ||||||| Sbjct 2882989 GTCAAGGTTTTCACAAAAATCTGCATT 2883015 Score = 87.8 bits (96), Expect = 4e-12 Identities = 89/115 (77%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||||| ||||||||||| ||||| || | ||||| |||||||| | Sbjct 12529375 CAAG-TGAAGAGTCGACTCCTTTTGGATGTTATAATCTGCAAGAGTTCGACCATCTTCAA 12529317 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 | ||| || || || || | |||||||| || | | |||||||||||| || Sbjct 12529316 GCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAGGGATTCCTTCCTTGTC 12529262 Score = 87.8 bits (96), Expect = 4e-12 Identities = 89/115 (77%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||||| ||||||||||| ||||| || | ||||| |||||||| | Sbjct 12548001 CAAG-TGAAGAGTCGACTCCTTTTGGATGTTATAATCTGCAAGAGTTCAACCATCTTCAA 12547943 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 | ||| || || || || | |||||||| || | | |||||||||||| || Sbjct 12547942 GCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGGAGGGATTCCTTCCTTGTC 12547888 >seq1 Length=37323695 Score = 132 bits (146), Expect = 1e-25 Identities = 155/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| ||||| || |||||||| || || || || | |||||| |||||||| | Sbjct 11148444 CAAG-TGAAGGGTAGATTCCTTTTGGATATTATAGTCAGCGAGAGTTCTTCCATCTTCAA 11148386 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| ||||| |||||||| | | ||| || ||||| ||||| | Sbjct 11148385 GCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATACCCTCCTTATCTTGGA 11148326 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| || ||| | || | | ||||||||||||| || || | || ||||| || | Sbjct 11148325 TCTTTGCCTTCACATTATCAATGGTGTCTGAACTCTCAACCTCCAATGTGATAGTCTTTC 11148266 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || ||||||||||| || | ||||| Sbjct 11148265 CGGTAAGAGTCTTCACAAAAATTTGCAT 11148238 Score = 127 bits (140), Expect = 5e-24 Identities = 163/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 |||||| | |||||| || ||||| || || || || || || ||||| |||||||| || Sbjct 32435693 CCTGAGACGGAGGACGAGGTGAAGGGTGGATTCCTTCTGAATATTGTAGTCGGCTAAGGT 32435752 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | || ||||| || || ||||||||||| || | ||||| |||| | |||||| Sbjct 32435753 GCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGATCCGGTGGGATTCC 32435812 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 |||||| || || || || ||||||| | || | | |||| || || || || || Sbjct 32435813 TTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGGATTCGACCTCTAG 32435872 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || ||||| || || || ||||||| |||||| || Sbjct 32435873 GGTTATGGTCTTCCCCGTTAGGGTTTTGACGAAGATCTGCATCTT 32435917 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| || || ||||| || ||||| || || || |||| |||| |||||| Sbjct 11147765 AGCACCAAATGGAGGGTGGACTCCTTCTGGATATTATAGTCAGCTAGGGTTCGACCATCT 11147706 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || || |||||||| |||||||| | | |||||||||||| ||| Sbjct 11147705 TCAAGCTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCAGGAGGGATTCCTTCCTTGTCT 11147646 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || |||||| | || | | || || ||||| || ||||| || || || Sbjct 11147645 TGGATCTTAGCCTTGACATTGTCAATAGTATCAGAGCTCTCAACCTCAAGGGTGATGGTC 11147586 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || ||||| |||| ||||| Sbjct 11147585 TTGCCTGTTAGGGTTTTCACAAAGATTTGCAT 11147554 Score = 120 bits (132), Expect = 7e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| ||||| ||||| ||||| || | || || |||||||| | Sbjct 11148216 CAAG-TGAAGGGTTGACTCCTTTTGAATGTTATAATCAGCAAGTGTCCTTCCATCTTCAA 11148158 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || || || || | ||||||||| || | | ||| || || || || |||| Sbjct 11148157 GTTGTTTTCCAGCAAAAATCAACCTCTGCTGATCTGGTGGGATACCCTCTTTATCCTGAA 11148098 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | |||| || |||||||| || | ||| || ||||| | Sbjct 11148097 TCTTAGCCTTGACATTGTCAATAGTGTCCGAGCTCTCTACCTCCAAAGTGATCGTTTTAC 11148038 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||||||||| || |||| ||||| Sbjct 11148037 CTGTGAGAGTCTTGACAAAGATTTGCAT 11148010 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || |||||||| | || || || || ||||||||||| || || | |||||||||||| Sbjct 11148677 AGAACAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGAGTTCTCCCATCC 11148618 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||||| || || || | |||||||||||| | | ||| || ||||| || Sbjct 11148617 TCCAGCTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGGATCCCCTCCTTGTCC 11148558 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || ||| || ||| | || | | ||||||| || || || || | || || || Sbjct 11148557 TGGATCTTTGCCTTCACATTATCAATGGTGTCTGAGCTATCAACCTCCAACGTTATTGTC 11148498 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | |||||||| || | |||||| Sbjct 11148497 TTTCCAGTCAAGGTCTTCACAAATATCTGCAT 11148466 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | |||||| || ||||| || ||||| || || || |||| || | || ||| Sbjct 11147993 AGCACCAAATGAAGGGTGGACTCCTTCTGGATATTATAGTCAGCTAGGGTGCGACCGTCT 11147934 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || |||||||| || || || || | | |||||||||||| ||| Sbjct 11147933 TCAAGCTGTTTGCCAGCAAAGATAAGTCTTTGTTGATCAGGAGGGATTCCTTCCTTGTCT 11147874 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||| ||| | || | | || || ||||| || || | || ||||| Sbjct 11147873 TGGATCTTCGCTTTAACATTGTCAATAGTATCAGAGCTCTCAACCTCCAAGGTGATAGTC 11147814 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| || |||| ||||| Sbjct 11147813 TTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 11147782 >seq2 Length=41236440 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| ||||| || || ||||| || || ||||| || ||||||| || | Sbjct 32406490 GAGGCGGAGGACCAGATGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCTAGGGTACG 32406549 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || ||||||||||| || | || ||||||| | ||| ||||| Sbjct 32406550 GCCGTCTTCAAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCCGGAGGGATGCCTTC 32406609 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||| | || | | |||| || || || || | || Sbjct 32406610 CTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCGACCTCCAAGGT 32406669 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || |||||||||| |||||| Sbjct 32406670 TATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 32406708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153814428385201