Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq7 174 3e-38 seq1 170 4e-37 seq9 167 5e-36 seq2 161 2e-34 seq6 158 3e-33 seq5 145 2e-29 seq3 93.3 9e-14 >seq7 Length=21614486 Score = 174 bits (192), Expect = 3e-38 Identities = 178/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930 |||||||||| |||||||| || ||||| | ||| || || ||||| |||||||||| Sbjct 2882558 AACCACCACGGAGGCGAAGGACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAG 2882617 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 | || ||||| |||||||| | || || || ||||||||||| | || ||||| | Sbjct 2882618 CCAGAGTGCGACCATCCTCCAACTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGAG 2882677 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCG 283049 |||| ||||||||||| || ||||||||||| || | || || ||||| | |||| || Sbjct 2882678 GAATCCCCTCCTTGTCCTGAATCTTTGCTTTCACATTGTCAATCGTGTCTG-AGCTCTCA 2882736 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || ||||| || || || ||||| ||||| || ||||||||||| Sbjct 2882737 ACCTCCAGGGTGATGGTTTTCCCAGTCAAGGTCTTCACAAATATCTGCAT 2882786 Score = 174 bits (192), Expect = 3e-38 Identities = 178/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930 |||||||||| |||||||| || ||||| | ||| || || ||||| |||||||||| Sbjct 2895548 AACCACCACGGAGGCGAAGGACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAG 2895607 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 | || ||||| |||||||| | || || || ||||||||||| | || ||||| | Sbjct 2895608 CCAGAGTGCGACCATCCTCCAACTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGAG 2895667 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCG 283049 |||| ||||||||||| || ||||||||||| || | || || ||||| | |||| || Sbjct 2895668 GAATCCCCTCCTTGTCCTGAATCTTTGCTTTCACATTGTCAATTGTGTCTG-AGCTCTCA 2895726 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || ||||| || || || ||||| ||||| || ||||||||||| Sbjct 2895727 ACCTCCAGGGTGATGGTTTTCCCAGTCAATGTCTTGACAAATATCTGCAT 2895776 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | || ||||| || || || | ||| || || ||||| ||||| |||||| Sbjct 2896462 CCACCCCTAAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCAGCA 2896521 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||||||||| ||||| || |||||||| | | |||||||| || Sbjct 2896522 AGGGTGCGGCCATCCTCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGG 2896581 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||||||||| ||||| || |||| |||||||| || ||| || Sbjct 2896582 ATCCCTTCCTTGTCTTGGATCTTGGCTTTGACATTATCAATAGTGTCAGAGCTTTCCACC 2896641 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | || || || || |||||||| Sbjct 2896642 TCGAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 2896688 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | || ||||| || || || | ||| || || ||||| ||||| |||||| Sbjct 2883472 CCACCCCTAAGTCGAAGAACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCAGCA 2883531 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||||||||| ||||| || |||||||| | | |||||||| || Sbjct 2883532 AGGGTGCGGCCATCCTCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGG 2883591 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||| ||||| ||||| || |||| |||||||| || ||| || Sbjct 2883592 ATCCCTTCCTTGTCTTGAATCTTAGCTTTGACATTATCAATAGTGTCAGAGCTTTCCACC 2883651 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | || || || || |||||||| Sbjct 2883652 TCGAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 2883698 Score = 154 bits (170), Expect = 3e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || | |||||| | |||| ||| | || || ||||||||||| ||||| ||| Sbjct 2882788 CCTCCTCTCAGGCGCAAAACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCTGCA 2882847 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | |||||||| || || || || ||||| ||||| | ||||||||| || Sbjct 2882848 AGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGGTGGG 2882907 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 ||||||||||| ||||||||||| ||||| ||| | || || ||||| | |||| || || Sbjct 2882908 ATACCCTCCTTATCTTGGATCTTGGCTTTAACGTTGTCAATTGTGTCAG-AGCTCTCCAC 2882966 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || | |||||| || ||||| ||||| || || || || ||||||||| Sbjct 2882967 CTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCATT 2883015 Score = 143 bits (158), Expect = 6e-29 Identities = 149/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||| ||||| ||||| || | ||||| || || || || || ||||| Sbjct 2895814 TCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCATCTTCAAGCTGCTTTCCAGCAAAA 2895873 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | ||||||||| || ||||||||||| ||||||||||| ||||| || | Sbjct 2895874 ATCAACCTCTGTTGGTCAGGTGGGATACCCTCCTTATCTTGGATCTTGGCTTTGACATTG 2895933 Query 283029 TCGATAGTGTCCGAAGCT-TCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| | |||| || || || | |||||| || ||||| ||||| || || || Sbjct 2895934 TCAATTGTGTCAG-AGCTCTCCACCTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCAC 2895992 Query 283088 GAATATCTGCATT 283100 || ||||||||| Sbjct 2895993 AAAAATCTGCATT 2896005 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || || |||| || | || || |||||||| ||||| || ||| Sbjct 2883016 CCACCACGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATCTGCA 2883075 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| | |||||||| | ||||| |||||||| |||| | ||||| || || Sbjct 2883076 AGCGTCCTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAGGG 2883135 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| |||||||| |||||||| |||||||| | || || || || ||| || ||| Sbjct 2883136 ATACCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTCTCAACT 2883195 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | || || ||||| || || | |||||| || || || ||||| Sbjct 2883196 TCCAAGGTAATAGTCTTTCCAGTGAGAGTCTTCACAAAAATTTGCAT 2883242 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || | |||| ||| | || || || || ||||| ||||| ||| Sbjct 2896234 CCACCACGAAGCCGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCA 2896293 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | |||||| || || ||||| |||||||| || || | || ||||| || Sbjct 2896294 AGGGTTCTGCCATCTTCAAGCTGTTTTCCGGCAAAAATTAACCTCTGCTGGTCCGGTGGG 2896353 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| || ||||| || || || ||||||| || |||||| || || Sbjct 2896354 ATACCCTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCACC 2896413 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||| || || || || | ||| || || ||||||||||| Sbjct 2896414 TCCAAAGTGATGGTTTTCCCAGTGAGAGTTTTCACAAATATCTGCAT 2896460 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || | |||| ||| | || || || || ||||| ||||| ||| Sbjct 2883244 CCACCACGGAGTCGCAACACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCA 2883303 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | |||||| || || ||||| || ||||| || || | || ||||| || Sbjct 2883304 AGGGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGG 2883363 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| || ||||| || || || ||||||| || |||||| || || Sbjct 2883364 ATACCCTCCTTGTCCTGAATCTTGGCCTTCACATTATCGATGGTATCCGAACTCTCCACC 2883423 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||| || || || || | ||| || || ||||||||||| Sbjct 2883424 TCCAAAGTGATGGTTTTCCCAGTGAGAGTTTTCACAAATATCTGCAT 2883470 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || || |||| || | || || |||||||| ||||| || ||| Sbjct 2896006 CCACCACGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATCTGCA 2896065 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| | |||||||| | ||||| |||||||| |||| | ||||| || || Sbjct 2896066 AGCGTCCTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGGAGGG 2896125 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| |||||||| |||||||| |||||||| | || || || || ||| || ||| Sbjct 2896126 ATACCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTATCAGAACTCTCAACT 2896185 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | || || ||||| || || | ||| || || || || ||||| Sbjct 2896186 TCCAAGGTAATTGTCTTTCCAGTGAGAGTTTTCACAAAAATTTGCAT 2896232 >seq1 Length=37323695 Score = 170 bits (188), Expect = 4e-37 Identities = 176/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| |||||||| || ||||| || ||| ||| || |||||||||||||| || Sbjct 11148692 CCACCACGAAGGCGAAGAACAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTCTGCC 11148633 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | |||||||| || || ||||| ||||| ||||| | || ||||| || Sbjct 11148632 AGAGTTCTCCCATCCTCCAGCTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGG 11148573 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || ||||||||||| ||||||||||| || || |||| || ||||| || ||| || || Sbjct 11148572 ATCCCCTCCTTGTCCTGGATCTTTGCCTTCACATTATCAATGGTGTCTGA-GCTATCAAC 11148514 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | || || ||||| || ||||| ||||| || ||||||||||| Sbjct 11148513 CTCCAACGTTATTGTCTTTCCAGTCAAGGTCTTCACAAATATCTGCAT 11148466 Score = 134 bits (148), Expect = 3e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || ||||| |||| ||| | ||| || || ||||| || |||||||| Sbjct 11148008 CCACCTCGAAGACGAAGCACCAAATGAAGGGTGGACTCCTTCTGGATATTATAGTCAGCT 11147949 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || || || || ||||| || |||||||| | | |||||| ||| || Sbjct 11147948 AGGGTGCGACCGTCTTCAAGCTGTTTGCCAGCAAAGATAAGTCTTTGTTGATCAGGAGGG 11147889 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || || ||||||||||||||||| ||||| || | || ||||| || | |||| || || Sbjct 11147888 ATTCCTTCCTTGTCTTGGATCTTCGCTTTAACATTGTCAATAGTATCAG-AGCTCTCAAC 11147830 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| || || | ||||| || || || ||||| Sbjct 11147829 CTCCAAGGTGATAGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 11147782 Score = 131 bits (144), Expect = 4e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| |||| ||| | ||| || || ||||| || |||||||| Sbjct 11147781 ACCACCACGGAGACGAAGCACCAAATGGAGGGTGGACTCCTTCTGGATATTATAGTCAGC 11147722 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || ||||| || || ||||| || ||||| || | | ||| |||||| || Sbjct 11147721 TAGGGTTCGACCATCTTCAAGCTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCAGGAGG 11147662 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050 || || ||||||||||||||||| || || || | || ||||| || | |||| || | Sbjct 11147661 GATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTGTCAATAGTATCAG-AGCTCTCAA 11147603 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || ||||| ||||| || || | || || || || || ||||| Sbjct 11147602 CCTCAAGGGTGATGGTCTTGCCTGTTAGGGTTTTCACAAAGATTTGCAT 11147554 Score = 129 bits (142), Expect = 1e-24 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| || | || || ||||| ||||| || |||||| Sbjct 11148236 CCACCACGAAGACGGAGAACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAATCAGCA 11148177 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | ||||| || |||||||| || ||||| ||||| | || || || || Sbjct 11148176 AGTGTCCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAACCTCTGCTGATCTGGTGGG 11148117 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 |||||||| || || || ||||| || || || | || |||||||||| |||| || || Sbjct 11148116 ATACCCTCTTTATCCTGAATCTTAGCCTTGACATTGTCAATAGTGTCCG-AGCTCTCTAC 11148058 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||||||| ||||| || | |||||| || || || ||||| Sbjct 11148057 CTCCAAAGTGATCGTTTTACCTGTGAGAGTCTTGACAAAGATTTGCAT 11148010 Score = 125 bits (138), Expect = 1e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| |||||||| || |||||||| || || | ||||| || || || || || ||||| Sbjct 11148429 TTCCTTTTGGATATTATAGTCAGCGAGAGTTCTTCCATCTTCAAGCTGCTTGCCAGCAAA 11148370 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | ||| ||||| || ||||||||||| |||||||||||||| || || | Sbjct 11148369 GATGAGCCTTTGCTGGTCTGGTGGGATACCCTCCTTATCTTGGATCTTTGCCTTCACATT 11148310 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||| || ||||| ||| || || || | ||||| ||||| || || | |||||| || Sbjct 11148309 ATCAATGGTGTCTGAACTCTCAACCTCCAATGTGATAGTCTTTCCGGTAAGAGTCTTCAC 11148250 Query 283088 GAATATCTGCAT 283099 || || ||||| Sbjct 11148249 AAAAATTTGCAT 11148238 >seq9 Length=38630433 Score = 167 bits (184), Expect = 5e-36 Identities = 177/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || |||||||| || | || ||| |||||||| ||||| || ||| Sbjct 27803262 CCGCCACGGAGACGGAGTACCAGGTGGAGAGTCGATTCCTTTTGGATATTGTAATCCGCA 27803203 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| || || ||||| || ||||| |||||||| || ||||| ||| ||| Sbjct 27803202 AGGGTTCGGCCGTCTTCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGATCAGGAGGA 27803143 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || || ||||||||||||||||| || || ||| | ||||| ||||| | |||| || || Sbjct 27803142 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCTG-AGCTCTCCAC 27803084 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| ||||| || || || || | || || ||||| |||||||| || Sbjct 27803083 CTCGAGGGTGATGGTTTTGCCGGTTAGGGTTTTCACGAAGATCTGCATCTT 27803033 Score = 161 bits (178), Expect = 2e-34 Identities = 151/192 (79%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| || ||||| |||||||| || || |||||||| ||||| || || || || || || Sbjct 27803455 TTCCTTCTGGATATTGTAGTCCGCCAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 27803396 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| || |||||||| || || |||||||||||||||||||| || || ||| | Sbjct 27803395 GATCAATCGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTAACGTT 27803336 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| ||||| || ||||||||| |||||||| ||||| || || | || || || Sbjct 27803335 GTCGATCGTGTCAGAGCTTTCGACTTCAAGAGTGATGGTCTTGCCGGTTAGGGTTTTGAC 27803276 Query 283088 GAATATCTGCAT 283099 ||| |||||||| Sbjct 27803275 GAAGATCTGCAT 27803264 Score = 136 bits (150), Expect = 8e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || ||||| || || || | || || || ||||||||||| || || Sbjct 27803947 ACCACCGCGAAGCCGAAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCTGC 27803888 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || |||||||| | ||| ||||| || || || | | || || ||| || Sbjct 27803887 AAGAGTACGCCCATCCTCCAATTGCTTCCCAGCGAAAATGAGCCTCTGCTGATCAGGTGG 27803828 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| ||||| || || || || ||| ||||||| || || ||| || || Sbjct 27803827 AATCCCCTCCTTATCTTGAATTTTCGCCTTCACGTTATCGATTGTATCAGAACTCTCCAC 27803768 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || |||||||| || |||| ||||| ||||| |||||||| Sbjct 27803767 CTCAAGCGTAATCGTCTTTCCAGTCAGCGTCTTCACGAAGATCTGCAT 27803720 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || | || || || || | ||| || || ||||||||||| || ||| Sbjct 27803718 CCTCCACGGAGCCTCAGCACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGCA 27803659 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | ||| ||||| | || |||||||| || ||||| | || || || || Sbjct 27803658 AGGGTCCTGCCGTCCTCCAACTGCTTCCCGGCGAATATCAACCTCTGCTGATCCGGAGGG 27803599 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||| || ||||| ||||| || ||| |||| || || |||||| || || Sbjct 27803598 ATCCCTTCCTTATCCTGGATTTTTGCCTTGACGTTATCAATTGTATCCGAACTCTCTACC 27803539 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || || || || ||||| || |||||||| |||||||| Sbjct 27803538 TCCAGAGTAATAGTTTTCCCGGTCAAGGTTTTAACGAAAATCTGCAT 27803492 >seq2 Length=41236440 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || ||||| || |||||||| | ||| || || || ||||| ||||| || Sbjct 32406482 CCACCGCGGAGGCGGAGGACCAGATGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCT 32406541 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| || || || || || ||||| ||||| | |||||||||||| || Sbjct 32406542 AGGGTACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCCGGAGGG 32406601 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||||||||| || || ||| | ||||| ||||| || | |||||| Sbjct 32406602 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCGACC 32406661 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | || || ||||||||||| | || || ||||| |||||||| Sbjct 32406662 TCCAAGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 32406708 >seq6 Length=26303135 Score = 158 bits (174), Expect = 3e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || || || || | || || || ||||||||||| || || Sbjct 25054103 CCACCACGTAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCGGCC 25054044 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | || ||||| ||||| || || ||||| |||||||| | | ||||||||| || Sbjct 25054043 AAGGTTCGGCCGTCCTCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGTTGGTCCGGTGGG 25053984 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| |||||||| || || ||| | ||||| ||||| ||| |||||| Sbjct 25053983 ATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAACTCTCGACT 25053924 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| ||||| ||||| || || | ||||||||||| |||||||| || Sbjct 25053923 TCGAGGGTGATTGTCTTGCCGGTGAGTGTCTTAACGAAGATCTGCATCTT 25053874 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || | | |||| ||| | || ||||| || ||||| || ||||| Sbjct 25054331 CCACCACGGAGCCTCAAAACCAAATGAAGTGTCGACTCTTTCTGAATGTTATAATCAGCC 25054272 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | || || || ||||| || || ||||| |||||||| | | ||| ||||| ||| Sbjct 25054271 AAAGTTCGACCGTCCTCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGCGGG 25054212 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| |||||||| || || ||| | ||||| ||||| || ||||||| Sbjct 25054211 ATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCGACT 25054152 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || |||||||||||||||| ||||| ||||| |||||||| Sbjct 25054151 TCCAGGGTTATCGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 25054105 Score = 141 bits (156), Expect = 2e-28 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930 |||||||||| ||||| | ||||| || | ||| || || || || ||||| |||| Sbjct 25054561 AACCACCACGAAGGCGCAAGACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCAG 25054502 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 | || || | ||||| || | ||| ||||| ||||| ||||| | ||| || || | Sbjct 25054501 CCAGAGTCCTTCCATCTTCCAATTGCTTCCCAGCAAATATCAACCTTTGCTGATCTGGTG 25054442 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCG 283049 |||| || |||||||| || |||||||| || || |||| || || ||||| ||| || Sbjct 25054441 GAATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTATCAATGGTATCCGA-GCTCTCC 25054383 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || | ||| || || || || |||| |||||||||||| |||||||| Sbjct 25054382 ACCTCCAAAGTAATGGTTTTCCCTGTCAGAGTCTTAACGAAAATCTGCAT 25054333 >seq5 Length=39371879 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || ||||| || | || || || |||||||| || || || Sbjct 2688885 ACCGCCACGAAGACGGAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTATAATCCGC 2688944 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || || || || || || ||||||||||| ||||| | | ||| ||||| || Sbjct 2688945 CAAGGTACGACCGTCTTCGAGCTGTTTCCCGGCGAAGATGAGCCTTTGCTGGTCGGGTGG 2689004 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||||||||||||||| || || ||| | ||||| ||||| ||| || || Sbjct 2689005 GATCCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAACTCTCCAC 2689064 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| ||||| || ||||| ||||| || || ||||| |||||||| Sbjct 2689065 TTCGAGGGTGATGGTTTTACCGGTCAAGGTTTTGACGAAGATCTGCAT 2689112 Score = 138 bits (152), Expect = 2e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| |||||||| ||||| | || | || ||||| || || ||||| || || Sbjct 2688465 TTCCTTTTGTATGTTGTAATCAGCCAAGGTCCTCCCGTCCTCAAGCTGCTTCCCAGCGAA 2688524 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| ||||||||||| || || || ||||| ||||||||||| || || ||| | Sbjct 2688525 GATCAATCGTTGTTGGTCTGGTGGGATCCCTTCCTTATCTTGGATCTTGGCCTTAACGTT 2688584 Query 283028 ATCGATAGTGTCCGAAGCT-TCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 ||| || ||||||| |||| ||||| || || || || ||||| || ||||| || || | Sbjct 2688585 ATCAATCGTGTCCG-AGCTCTCGACCTCCAGGGTTATAGTCTTTCCTGTCAAGGTTTTGA 2688643 Query 283087 CGAATATCTGCAT 283099 | || || ||||| Sbjct 2688644 CAAAGATTTGCAT 2688656 Score = 138 bits (152), Expect = 2e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || |||||||| || || ||||| | || ||||| ||||| || ||||||||||| ||| Sbjct 2688694 TCCTTTTGGATATTATAATCAGCCAAAGTACGGCCGTCCTCCAGCTGTTTCCCGGCGAAG 2688753 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | || |||||||| || || || || ||||| ||||| || || || ||| | Sbjct 2688754 ATGAGCCGCTGTTGGTCGGGAGGGATGCCTTCTTTGTCCTGGATTTTGGCCTTGACGTTG 2688813 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| ||| ||||||||||| ||||| || || || |||||||| || || Sbjct 2688814 TCGATCGTGTCGGAACTCTCGACTTCGAGGGTGATGGTTTTGCCGGTCAAAGTTTTGACA 2688873 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 2688874 AAGATTTGCAT 2688884 Score = 138 bits (152), Expect = 2e-27 Identities = 171/233 (73%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || ||||| || | || || || ||||||||||| || || Sbjct 2689113 ACCGCCACGAAGACGGAGGACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 2689172 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCG-GCAAAGATCAAACGTTGTTGGTCACCCG 282990 | || ||||| || || || ||||| || || ||||| | | ||| ||||| | Sbjct 2689173 CAAGGTACGGCCGTCTTCGAGCTGTTTGCCACGCGAAGATGAGCCTTTGCTGGTCGGGTG 2689232 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || || ||||||||||||||||| || || ||| | ||||| ||||| ||| |||| Sbjct 2689233 GGATCCCTTCCTTGTCTTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGA 2689292 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 | |||||||| || ||||| || |||| || || ||||| |||||||| ||| Sbjct 2689293 CCTCGAGAGTTATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATCTTC 2689345 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| || || || | || ||||| || ||||| || ||||| Sbjct 2688202 CCACCACGGAGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTATAATCAGCT 2688261 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | || | |||||||| | ||| |||||||||||||| | | ||| || || || Sbjct 2688262 AAAGTCCTCCCATCCTCCAATTGCTTCCCGGCAAAGATAAGCCTTTGCTGATCTGGGGGG 2688321 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||| || || |||||||| || || ||||||| || |||||| ||| || Sbjct 2688322 ATTCCTTCCTTATCCTGAATCTTTGCCTTGACATTATCGATTGTATCCGAACTTTCCACC 2688381 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || | ||||| || || || ||||| ||||| || || ||||||||| Sbjct 2688382 TCCAAGGTGATTGTTTTTCCAGTCAAGGTCTTGACAAAAATCTGCATT 2688429 Score = 91.5 bits (100), Expect = 3e-13 Identities = 86/107 (80%), Gaps = 2/107 (2%) Strand=Plus/Plus Query 282994 TACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGACT 283052 |||| || |||||||||||||| ||||| || |||| ||||||| || ||| ||||| Sbjct 6357439 TACCTTCTTTGTCTTGGATCTTGGCTTTGACATTATCAATAGTGT-CGCTGCTCTCGACC 6357497 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| || ||||| || || | || || |||||||||||||| Sbjct 6357498 TCGAGAGTTATGGTCTTGCCGGTGAGGGTTTTCACGAATATCTGCAT 6357544 >seq3 Length=36364294 Score = 93.3 bits (102), Expect = 9e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| |||||||| |||||||| || || ||| | ||||||||||| | |||||| Sbjct 30273768 ATACCTTCCTTGTCCTGGATCTTAGCCTTAACGTTGTCGATAGTGTCACTGGATTCGACC 30273709 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCATA 283106 || || || || ||||| ||||| | || || ||||| |||||||||||| || Sbjct 30273708 TCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTTCCTA 30273655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046733419709874