Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq7 132 3e-26 seq2 131 1e-25 seq6 127 1e-24 seq1 122 6e-23 seq9 118 8e-22 seq5 116 3e-21 >seq7 Length=21614486 Score = 132 bits (146), Expect = 3e-26 Identities = 171/234 (73%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | ||| | || ||||| ||| || || |||||||||||| |||||||| Sbjct 2883012 CATTCCACCACGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATC 2883071 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || | | | || |||| ||| || |||||||| |||| | ||| ||||||| Sbjct 2883072 TGCAAGCGTCCTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGG 2883131 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTT--CTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 ||| | ||||||||| ||| ||||| || | || ||| | ||||| || | Sbjct 2883132 AGGGATACCTTCCTTGTCCTGGATCTTAGCTTTTACATTGT--CAATGGTATCAGAACTC 2883189 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || |||| ||||| |||||||| ||||| |||||||| || ||||||||| Sbjct 2883190 TCAACTTCCAAGGTAATAGTCTTTCCAGTGAGAGTCTTCACAAAAATTTGCATG 2883243 Score = 129 bits (142), Expect = 4e-25 Identities = 170/234 (73%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | ||| | || ||||| ||| || || |||||||||||| |||||||| Sbjct 2896002 CATTCCACCACGCAGACGCAGCACCAAGTGGAGGGTTGACTCCTTTTGGATATTGTAATC 2896061 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || | | | || |||| ||| || |||||||| |||| | ||| ||||||| Sbjct 2896062 TGCAAGCGTCCTCCCATCCTCCAACTGTTTGCCGGCAAATATCAGCCTCTGTTGATCTGG 2896121 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTT--CTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 ||| | ||||||||| ||| ||||| || | || ||| | ||||| || | Sbjct 2896122 AGGGATACCTTCCTTGTCCTGGATCTTAGCTTTTACATTGT--CAATGGTATCAGAACTC 2896179 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || |||| ||||| |||||||| ||||| || ||||| || ||||||||| Sbjct 2896180 TCAACTTCCAAGGTAATTGTCTTTCCAGTGAGAGTTTTCACAAAAATTTGCATG 2896233 Score = 109 bits (120), Expect = 4e-19 Identities = 153/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| ||| |||||| ||||| ||||| || || || ||| | || ||| Sbjct 2882578 ACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATCCTCC 2882637 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| || ||||||||||| | |||||| |||| ||| | || ||||| ||| Sbjct 2882638 AACTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTGA 2882697 Query 44249 ATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||||| || ||| | || ||||| | | || ||||||| || || || Sbjct 2882698 ATCTT-TGCTTTCACATTGT--CAATCGTGTCTGAGCTCTCAACCTCCAGGGTGATGGTT 2882754 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | ||||||||| || || ||||| Sbjct 2882755 TTCCCAGTCAAGGTCTTCACAAATATCTGCAT 2882786 Score = 105 bits (116), Expect = 5e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | ||| |||| || || || ||||||||||||||| || || Sbjct 2882784 CATCCCTCCTCTCAGGCGCAAAACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTC 2882843 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| | | | || || |||||||| || ||||| ||||| | ||| || || | Sbjct 2882844 TGCAAGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGG 2882903 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285 || | ||| ||||| || ||||| |||| || ||| | || ||||| | | | Sbjct 2882904 TGGGATACCCTCCTTATCTTGGATCTT-GGCTTTAACGTTGTCAATTGTGTCAGAGCTCT 2882962 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| || || || || || || | ||| ||||| || || ||||| Sbjct 2882963 CCACCTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 2883014 Score = 100 bits (110), Expect = 2e-16 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| ||| |||||| ||||| ||||| || || || ||| | || ||| Sbjct 2895568 ACAAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATCCTCC 2895627 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| || ||||||||||| | |||||| |||| ||| | || ||||| ||| Sbjct 2895628 AACTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTGA 2895687 Query 44249 ATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||||| || ||| | || ||||| | | || ||||||| || || || Sbjct 2895688 ATCTT-TGCTTTCACATTGT--CAATTGTGTCTGAGCTCTCAACCTCCAGGGTGATGGTT 2895744 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | ||||| || || || ||||| Sbjct 2895745 TTCCCAGTCAATGTCTTGACAAATATCTGCAT 2895776 Score = 96.9 bits (106), Expect = 2e-15 Identities = 106/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168 |||| || || || ||||| |||| |||||| || ||||||||||||||| ||||| | Sbjct 12529397 TTCCTCCCCTAAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCTG 12529338 Query 44169 C--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||||| || | || || ||||| || || ||||| ||||| | ||||||||| | Sbjct 12529337 CAAGAGTT--CGACCATCTTCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGG 12529280 Query 44227 AGGCACACCTTCCTTTTCC 44245 ||| | |||||||| ||| Sbjct 12529279 AGGGATTCCTTCCTTGTCC 12529261 Score = 96.9 bits (106), Expect = 2e-15 Identities = 106/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168 |||| || || || ||||| |||| |||||| || ||||||||||||||| ||||| | Sbjct 12607095 TTCCTCCCCTAAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCTG 12607036 Query 44169 C--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||||| || | || || ||||| || || ||||| ||||| | ||||||||| | Sbjct 12607035 CAAGAGTT--CGACCATCCTCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAGG 12606978 Query 44227 AGGCACACCTTCCTTTTCC 44245 ||| | |||||||| ||| Sbjct 12606977 AGGGATTCCTTCCTTATCC 12606959 Score = 95.1 bits (104), Expect = 9e-15 Identities = 163/234 (70%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || | ||| |||| || || || ||||||||||||||| || || Sbjct 2895774 CATCCCTCCTCTAAGGCGCAAGACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTC 2895833 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| | | | || || |||||||| || ||||| ||||| | ||| || || | Sbjct 2895834 TGCAAGTGTCCTCCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGTTGGTCAGG 2895893 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGA 44283 || | ||| ||||| || ||||| |||| || ||| | || ||||| | | Sbjct 2895894 TGGGATACCCTCCTTATCTTGGATCTT-GGCTTTGACATTGT--CAATTGTGTCAGAGCT 2895950 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||| || || || || || || | ||| ||||| || || ||||| Sbjct 2895951 CTCCACCTCCAAAGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 2896004 Score = 95.1 bits (104), Expect = 9e-15 Identities = 106/140 (76%), Gaps = 4/140 (3%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 ||||| || || || ||||| |||| |||||| || ||||||||||||||| ||||| Sbjct 12548024 ATTCCTCCCCTAAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCT 12547965 Query 44168 GC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 || ||||| | | || || ||||| || || ||||| ||||| | ||||||||| | Sbjct 12547964 GCAAGAGTT--CAACCATCTTCAAGCTGTTTGCCAGCAAAAATCAATCTCTGCTGATCAG 12547907 Query 44226 AAGGCACACCTTCCTTTTCC 44245 ||| | |||||||| ||| Sbjct 12547906 GAGGGATTCCTTCCTTGTCC 12547887 >seq2 Length=41236440 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||| || || ||| |||||| || ||||| || ||||| || || |||| || Sbjct 32406500 ACCAGATGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCTAGGGTACGGCCGTCTTCA 32406559 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | ||| || || || | ||| | |||||||| || Sbjct 32406560 AGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCCGGAGGGATGCCTTCCTTGTCTTGG 32406619 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||||| |||||| ||||||| || || ||||| Sbjct 32406620 ATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCGACCTCCAAGGTTATGGTCTTA 32406679 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| ||||| ||||||||||| |||||| Sbjct 32406680 CCCGTTAGGGTTTTCACGAAGATCTGCATG 32406709 >seq6 Length=26303135 Score = 127 bits (140), Expect = 1e-24 Identities = 169/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || ||||| |||| ||||| || ||| || || ||||| ||||| Sbjct 25054335 CATCCCACCACGGAGCCTCAAAACCAAATGAAGTGTCGACTCTTTCTGAATGTTATAATC 25054276 Query 44167 GGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 || | ||| || |||| || ||||||||||| |||||||| | | ||||| ||| Sbjct 25054275 AGCCAAAGTT--CGACCGTCCTCGAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCT 25054218 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | |||||||| ||| ||||| ||||| | | |||||||||| | | Sbjct 25054217 GGCGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTT 25054158 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||| || |||||||| ||||| |||||||| |||||||| ||||| Sbjct 25054157 TCGACTTCCAGGGTTATCGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 25054105 Score = 113 bits (124), Expect = 3e-20 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 ||| ||||||||||| ||| |||||| || || |||||||| || || | | || Sbjct 25054545 CAAGACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCCAGAGTCCTTCCATC 25054486 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 |||| |||||||| ||||| ||||| | |||||||||| || | |||||||| || Sbjct 25054485 TTCCAATTGCTTCCCAGCAAATATCAACCTTTGCTGATCTGGTGGAATCCCTTCCTTGTC 25054426 Query 44245 CGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303 | ||||| ||| | || || | ||||| || | | |||||||||| ||||| | Sbjct 25054425 CTGAATCTT-TGCCTTAACATTATCAATGGTATCCGAGCTCTCCACCTCCAAAGTAATGG 25054367 Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || || ||||| ||||| || ||||| Sbjct 25054366 TTTTCCCTGTCAGAGTCTTAACGAAAATCTGCAT 25054333 Score = 100 bits (110), Expect = 2e-16 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGA--GTTGGCGCTCGTCGT 44186 || ||||| || || |||||| ||||||||||||||||| | ||| | || |||| | Sbjct 25054085 ACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCGGCCAAGGTTCG-GC-CGTCCT 25054028 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | ||||||||||| |||||||| | | || || || | || | |||||||| ||| Sbjct 25054027 CGAGCTGCTTCCCAGCAAAGATAAGCCTTTGTTGGTCCGGTGGGATCCCTTCCTTGTCCT 25053968 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||||| | | || ||||||| || || || | || || |||| Sbjct 25053967 GGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAACTCTCGACTTCGAGGGTGATTGTCT 25053908 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||| ||||| |||||||| ||||| Sbjct 25053907 TGCCGGTGAGTGTCTTAACGAAGATCTGCAT 25053877 >seq1 Length=37323695 Score = 122 bits (134), Expect = 6e-23 Identities = 144/193 (75%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 ||||| ||||||||||| || || ||||| | | | || |||||||||||||| |||| Sbjct 11148656 TCCTTCTGGATGTTGTAGTCTGCCAGAGTT--CTCCCATCCTCCAGCTGCTTCCCAGCAA 11148599 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 | ||||| | |||||| |||| ||| | || ||||| ||| ||||| ||||| Sbjct 11148598 AAATCAACCTCTGCTGGTCTGGAGGGATCCCCTCCTTGTCCTGGATCTTTGCCTTCACAT 11148539 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | |||||||| | | || ||||||| ||| || |||||||| || | |||||||| Sbjct 11148538 TATCAATGGTGTCTGAGCTATCAACCTCCAACGTTATTGTCTTTCCAGTCAAGGTCTTCA 11148479 Query 44325 CGAAGATTTGCAT 44337 | || || ||||| Sbjct 11148478 CAAATATCTGCAT 11148466 Score = 107 bits (118), Expect = 1e-18 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || ||||||||| ||||| ||||| || ||| | | || || Sbjct 11148218 ACCAAGTGAAGGGTTGACTCCTTTTGAATGTTATAATCAGCAAGTGTCCTTCCATCTTCA 11148159 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || || ||||| ||||| | ||||||||||| || | ||| || || ||| Sbjct 11148158 AGTTGTTTTCCAGCAAAAATCAACCTCTGCTGATCTGGTGGGATACCCTCTTTATCCTGA 11148099 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | || ||||| | | || ||||||| || ||||| | Sbjct 11148098 ATCTTAGCCTTGACATTGT--CAATAGTGTCCGAGCTCTCTACCTCCAAAGTGATCGTTT 11148041 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || ||||| ||||| || |||||||||||| Sbjct 11148040 TACCTGTGAGAGTCTTGACAAAGATTTGCATG 11148009 Score = 105 bits (116), Expect = 5e-18 Identities = 166/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || |||| || | | ||||| ||||| ||| |||||| ||||| || || Sbjct 11148015 TTGCATGCCACCTCGAAGACGAAGCACCAAATGAAGGGTGGACTCCTTCTGGATATTATA 11147956 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || || || ||| |||| || ||||| || || |||||||| | | || ||||| Sbjct 11147955 GTCAGCTAGGGTGCGACCGTCTTCAAGCTGTTTGCCAGCAAAGATAAGTCTTTGTTGATC 11147896 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 | ||| | |||||||| || |||||| |||| || || | || || || | | Sbjct 11147895 AGGAGGGATTCCTTCCTTGTCTTGGATCTTC-GCTTTAACATTGTCAATAGTATCAGAGC 11147837 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||| || || |||||||| ||||| ||||| || ||||||||||| Sbjct 11147836 TCTCAACCTCCAAGGTGATAGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 11147782 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 |||||||| |||||| || ||||||||||| || || || ||||| | | || Sbjct 11148450 CAACACCAAGTGAAGGGTAGATTCCTTTTGGATATTATAGTCAGCGAGAGTTCTTCCATC 11148391 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 || |||||||| || |||||||| | | ||||| |||| || | ||| ||||| || Sbjct 11148390 TTCAAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATACCCTCCTTATC 11148331 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| ||||| | | |||||||| | || ||||||| || || || Sbjct 11148330 TTGGATCTTTGCCTTCACATTATCAATGGTGTCTGAACTCTCAACCTCCAATGTGATAGT 11148271 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || || |||||||| || |||||||| Sbjct 11148270 CTTTCCGGTAAGAGTCTTCACAAAAATTTGCAT 11148238 Score = 98.7 bits (108), Expect = 7e-16 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168 |||| || || || ||||| || |||||||| ||| ||||||||||||||| ||||| | Sbjct 8434241 TTCCTCCCCTAAGCCTCAAAACAAGGTGAAGTGTGGACTCCTTTTGGATGTTATAATCAG 8434182 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | || || | || ||||| ||||| || ||||| ||||| | ||||||||| | || Sbjct 8434181 CAAGCGTTCGGCCATCTTCCAGTTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGAG 8434122 Query 44229 GCACACCTTCCTTTTCC 44245 | | ||||| || ||| Sbjct 8434121 GGATGCCTTCTTTATCC 8434105 >seq9 Length=38630433 Score = 118 bits (130), Expect = 8e-22 Identities = 170/235 (72%), Gaps = 6/235 (3%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || |||| ||| |||||||| ||| |||||| |||||||||||||| Sbjct 27803722 CATCCCTCCACGGAGCCTCAGCACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATC 27803663 Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 || || || || |||| |||| |||||||||||| || ||||| | ||||||||| Sbjct 27803662 CGCAAG--GGTCCTGCCGTCCTCCAACTGCTTCCCGGCGAATATCAACCTCTGCTGATCC 27803605 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGA 44283 | ||| | |||||||| ||| || || ||| | | ||| | || || || | Sbjct 27803604 GGAGGGATCCCTTCCTTATCCTGGAT-TTTTGCCTTGACGTTATCAATTGTATCCGAACT 27803546 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||||| ||||| || || || || | ||| || ||||| || |||||| Sbjct 27803545 CTCTACCTCCAGAGTAATAGTTTTCCCGGTCAAGGTTTTAACGAAAATCTGCATG 27803491 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || ||||||||||| |||||||| || || || |||| || Sbjct 27803244 ACCAGGTGGAGAGTCGATTCCTTTTGGATATTGTAATCCGCAAGGGTTCGGCCGTCTTCA 27803185 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| |||||||| ||||| ||||| | ||| | |||||||| || Sbjct 27803184 AGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCTTGG 27803125 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| | | |||||||| | || || || || Sbjct 27803124 ATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCGAGGGTGATGGTTTTG 27803065 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| ||||||||||| ||||| Sbjct 27803064 CCGGTTAGGGTTTTCACGAAGATCTGCAT 27803036 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| |||||||||||||| || || ||| | || ||| Sbjct 27803928 ACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCTGCAAGAGTACGCCCATCCTCC 27803869 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||||| || || || | | ||||||||| | || | || ||||| || Sbjct 27803868 AATTGCTTCCCAGCGAAAATGAGCCTCTGCTGATCAGGTGGAATCCCCTCCTTATCTTGA 27803809 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || ||| ||||| | | || || || | |||||||| | ||||||||||||| Sbjct 27803808 ATTTTCGCCTTCACGTTATCGATTGTATCAGAACTCTCCACCTCAAGCGTAATCGTCTTT 27803749 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || |||||||||||||| ||||| Sbjct 27803748 CCAGTCAGCGTCTTCACGAAGATCTGCAT 27803720 >seq5 Length=39371879 Score = 116 bits (128), Expect = 3e-21 Identities = 167/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || ||||| || || ||||| || |||||||| ||||||||||| Sbjct 2688426 CATTCCTCCACGAAGCCTCAAAACAAGATGAAGGGTTGATTCCTTTTGTATGTTGTAATC 2688485 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || | | | |||| || ||||||||||| || |||||||| || || || |||| Sbjct 2688486 AGCCAAGGTCCTCCCGTCCTCAAGCTGCTTCCCAGCGAAGATCAATCGTTGTTGGTCTGG 2688545 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285 || | |||||||| || ||||| || | || ||| | || ||||| | | | Sbjct 2688546 TGGGATCCCTTCCTTATCTTGGATCTT-GGCCTTAACGTTATCAATCGTGTCCGAGCTCT 2688604 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||||||| || || |||||||| || | ||| || || |||||||||||| Sbjct 2688605 CGACCTCCAGGGTTATAGTCTTTCCTGTCAAGGTTTTGACAAAGATTTGCATG 2688657 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/211 (70%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || |||||| |||||||||||||| || | || |||| || Sbjct 2689132 ACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGTACGGCCGTCTTCG 2689191 Query 44189 AGCTGCTTCCCG-GCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||| || || || ||||| | | ||||| || | || | |||||||| || Sbjct 2689192 AGCTGTTTGCCACGCGAAGATGAGCCTTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTG 2689251 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | |||||||||| || ||||| | || || |||| Sbjct 2689252 GATCTTGGCCTT-AACGTTGTCGATGGTGTCGGAACTCTCGACCTCGAGAGTTATGGTCT 2689310 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || ||||| ||||||||||| ||||| Sbjct 2689311 TGCCGGTCAGGGTTTTCACGAAGATCTGCAT 2689341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988509037927