Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Theobroma_20cacao_20[refseq_20GCF_5F000208745.1_202016-07-09] 431 sequences; 324,879,930 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq6 178 3e-39 seq9 174 4e-38 seq7 168 2e-36 seq5 168 2e-36 seq1 168 2e-36 seq2 165 2e-35 seq3 84.2 5e-11 >seq6 Length=26303135 Score = 178 bits (196), Expect = 3e-39 Identities = 169/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || ||||| ||||| || || |||||||| ||| Sbjct 25054108 CAGATCTTCGTCAAGACCCTGACGGGTAAGACGATAACCCTGGAAGTCGAAAGCTCCGAC 25054167 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| |||||||| ||||||||||| || ||||||||| Sbjct 25054168 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGAATCCCGCCAGACCAGCAA 25054227 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | |||||||| || || || |||||||| || || | ||| | || ||||||||| | Sbjct 25054228 AGGCTTATCTTTGCTGGGAAGCAGCTCGAGGACGGTCGAACTTTGGCTGATTATAACATT 25054287 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || ||||| || ||||| ||| | |||||||| ||| Sbjct 25054288 CAGAAAGAGTCGACACTTCATTTGGTTTTGAGGCTC 25054323 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||||||||| || || || || ||| Sbjct 25053880 CAGATCTTCGTTAAGACACTCACCGGCAAGACAATCACCCTCGAAGTCGAGAGTTCCGAC 25053939 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||| |||||||| ||||| ||||| |||||||| ||| Sbjct 25053940 ACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGGATCCCACCGGACCAACAA 25053999 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | |||||||| || || || |||||||| || || | || | |||||||| ||| || Sbjct 25054000 AGGCTTATCTTTGCTGGGAAGCAGCTCGAGGACGGCCGAACCTTGGCCGATTACAACATC 25054059 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 25054060 CAGAAGGAGTCGACTCTCCACCTCGT 25054085 Score = 140 bits (154), Expect = 8e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||||| ||||| ||||| || || | |||||||| ||||| || Sbjct 25054336 CAGATTTTCGTTAAGACTCTGACAGGGAAAACCATTACTTTGGAGGTGGAGAGCTCGGAT 25054395 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || ||||||||||||||| ||||| || || || || |||||| Sbjct 25054396 ACCATTGATAATGTTAAGGCAAAGATTCAGGACAAGGAAGGGATTCCACCAGATCAGCAA 25054455 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || || || || | ||||||||||||||||| || ||||| || | Sbjct 25054456 AGGTTGATATTTGCTGGGAAGCAATTGGAAGATGGAAGGACTCTGGCTGATTACAATATT 25054515 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || || || || || || || ||| Sbjct 25054516 CAGAAGGAGTCCACCCTTCACCTGGTCTTG 25054545 >seq9 Length=38630433 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| || || || ||||| ||||||||||||||||| ||||||||| Sbjct 27803039 CAGATCTTCGTGAAAACCCTAACCGGCAAAACCATCACCCTCGAGGTGGAGAGCTCAGAC 27803098 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| || ||||| ||||| || ||||| || || || Sbjct 27803099 ACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCTGATCAACAG 27803158 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| || || || ||||| || | || ||||| ||||| || || Sbjct 27803159 CGCTTGATCTTCGCCGGCAAGCAACTTGAAGACGGCCGAACCCTTGCGGATTACAATATC 27803218 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| ||||| || || || || || Sbjct 27803219 CAAAAGGAATCGACTCTCCACCTGGT 27803244 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| || || || || || ||||| || || || |||||||| ||| Sbjct 27803267 CAGATCTTCGTCAAAACCCTAACCGGCAAGACCATCACTCTTGAAGTCGAAAGCTCTGAC 27803326 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||| || ||||| || || |||||||||||||| || Sbjct 27803327 ACGATCGACAACGTTAAGGCCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAG 27803386 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| || || |||||||| || || | || || || || || || || Sbjct 27803387 CGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCGGACTACAATATC 27803446 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || |||||||| || || ||||| Sbjct 27803447 CAGAAGGAATCAACCCTTCACCTTGT 27803472 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| ||||| | || || ||||| || || || ||||| || || || || Sbjct 27803495 CAGATTTTCGTTAAAACCTTGACCGGGAAAACTATTACTCTGGAGGTAGAGAGTTCGGAT 27803554 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| ||| || ||||| || ||||| ||||||||||| ||||| Sbjct 27803555 ACAATTGATAACGTCAAGGCAAAAATCCAGGATAAGGAAGGGATCCCTCCGGATCAGCAG 27803614 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || |||||||| || ||| | || || || ||||| ||||| ||||| ||| || Sbjct 27803615 AGGTTGATATTCGCCGGGAAGCAGTTGGAGGACGGCAGGACCCTTGCGGATTACAACATC 27803674 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || || ||||| |||| ||| Sbjct 27803675 CAGAAGGAGTCCACTCTTCACCTTGTGCTGAGGCTC 27803710 >seq7 Length=21614486 Score = 168 bits (186), Expect = 2e-36 Identities = 168/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || |||||||| || || || || || ||||||||||||||||||||||| ||| Sbjct 2883695 CAGATCTTTGTGAAAACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAAAGCTCTGAC 2883636 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| |||||||| ||||| ||||| ||||| || ||||| || Sbjct 2883635 ACTATTGATAATGTCAAAGCTAAGATTCAAGACAAGGAAGGGATCCCACCAGACCAACAG 2883576 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | |||||||| || || |||||||| || ||||| | || ||||| ||||| || || Sbjct 2883575 AGGCTTATCTTTGCTGGTAAACAGCTAGAGGATGGCCGCACCCTTGCTGATTACAATATC 2883516 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 || || || || || || || |||||| | |||| || Sbjct 2883515 CAGAAGGAGTCCACCCTCCACCTTGTTCTTCGACTTAG 2883478 Score = 167 bits (184), Expect = 6e-36 Identities = 163/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || |||||||||||||| || ||||| ||||| | |||||||| || || || Sbjct 2896457 CAGATATTTGTGAAAACTCTCACTGGGAAAACCATCACTTTGGAGGTGGAGAGTTCGGAT 2896398 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || |||||||||||||| || || ||||| ||||||||||| Sbjct 2896397 ACCATCGATAATGTGAAGGCCAAGATTCAGGACAAGGAGGGTATCCCACCGGACCAGCAG 2896338 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || |||||||||||||| |||||||| || || ||||| || |||||| | Sbjct 2896337 AGGTTAATTTTTGCCGGAAAACAGCTTGAAGATGGCAGAACCCTTGCAGACTATAACATT 2896278 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || ||||| || ||| | || ||| Sbjct 2896277 CAGAAGGAGTCAACCCTCCATTTGGTGTTG 2896248 Score = 165 bits (182), Expect = 2e-35 Identities = 166/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || |||||||||||||| || ||||| ||||| | |||||||| || || || Sbjct 2883467 CAGATATTTGTGAAAACTCTCACTGGGAAAACCATCACTTTGGAGGTGGAGAGTTCGGAT 2883408 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || |||||||||||||| || || ||||| || |||||||| Sbjct 2883407 ACCATCGATAATGTGAAGGCCAAGATTCAGGACAAGGAGGGTATCCCACCAGACCAGCAG 2883348 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || ||||||||||| |||||||| || || ||||| || |||||| | Sbjct 2883347 AGGTTAATTTTTGCTGGAAAACAGCTTGAAGATGGCAGAACCCTTGCAGACTATAACATT 2883288 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || ||||| || ||| | || ||| ||||| Sbjct 2883287 CAGAAGGAGTCAACCCTCCATTTGGTGTTGCGACTC 2883252 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || |||||||| || || || || || ||||||||||||||||||||||| ||| Sbjct 2896685 CAGATCTTTGTGAAAACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAAAGCTCTGAC 2896626 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| ||||| || ||||| ||||| ||||| || ||||| || Sbjct 2896625 ACTATTGATAATGTCAAAGCCAAGATCCAAGACAAGGAAGGGATCCCACCAGACCAACAG 2896566 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | |||||||| || || |||||||| || ||||| | || ||||| ||||| || || Sbjct 2896565 AGGCTTATCTTTGCTGGTAAACAGCTAGAGGATGGCCGCACCCTTGCTGATTACAATATC 2896506 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 2896505 CAGAAGGAGTCCACCCTCCACCTTGT 2896480 Score = 154 bits (170), Expect = 4e-32 Identities = 158/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| |||||||||||||| ||||| || || ||| | || || || || || || Sbjct 2896229 CAAATTTTTGTGAAAACTCTCACTGGAAAGACAATTACCTTGGAAGTTGAGAGTTCTGAT 2896170 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| ||||| |||||||| ||||| |||||||| || || || Sbjct 2896169 ACCATTGACAATGTAAAAGCTAAGATCCAGGACAAGGAAGGTATCCCTCCAGATCAACAG 2896110 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || || || ||||| |||||| | || ||||| ||||| ||||| ||||| || || Sbjct 2896109 AGGCTGATATTTGCCGGCAAACAGTTGGAGGATGGGAGGACGCTTGCAGATTACAATATC 2896050 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || ||||| || || |||| Sbjct 2896049 CAAAAGGAGTCAACCCTCCA-CTTG 2896026 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || | || || ||||| |||||||| ||||| || ||||||||| Sbjct 2882783 CAGATATTTGTGAAGACCTTGACTGGGAAAACCATCACCCTGGAGGTTGAGAGCTCAGAC 2882724 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| ||||||||||||||| || || || ||||| |||||||| Sbjct 2882723 ACGATTGACAATGTGAAAGCAAAGATTCAGGACAAGGAGGGGATTCCTCCAGACCAGCAG 2882664 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || || || ||| | || ||||| | ||||| || || || || || Sbjct 2882663 AGGTTGATCTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACTCTGGCTGACTACAATATC 2882604 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || |||||||| Sbjct 2882603 CAGAAGGAGTCCACCCTTCATCTTGT 2882578 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || | || || ||||| |||||||| ||||| || ||||||||| Sbjct 2895773 CAGATATTTGTCAAGACATTGACTGGGAAAACCATCACCCTGGAGGTTGAGAGCTCAGAC 2895714 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| ||||||||||||||| || || || ||||| |||||||| Sbjct 2895713 ACAATTGACAATGTGAAAGCAAAGATTCAGGACAAGGAGGGGATTCCTCCAGACCAGCAG 2895654 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || || || ||| | || ||||| | ||||| || || || || || Sbjct 2895653 AGGTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTCGCACTCTGGCTGACTACAATATC 2895594 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || |||||||| Sbjct 2895593 CAGAAGGAGTCCACCCTTCATCTTGT 2895568 Score = 113 bits (124), Expect = 1e-19 Identities = 103/130 (79%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 178012 AGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCG 178071 ||||||| |||||||||||||| || ||||| || | || || || || |||||||| | Sbjct 12529260 AGGACAAGGAAGGAATCCCTCCTGATCAGCAGAGATTGATTTTTGCTGGCAAACAGCTTG 12529319 Query 178072 AAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||||| | |||||||| ||||||||| ||||||| || || || || || | |||| Sbjct 12529320 AAGATGGTCGAACTCTTGCAGATTATAACATCCAAAAGGAGTCGACTCTTCACTTGGTTT 12529379 Query 178132 TGAGACTCAG 178141 |||| || || Sbjct 12529380 TGAGGCTTAG 12529389 Score = 113 bits (124), Expect = 1e-19 Identities = 103/130 (79%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 178012 AGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCG 178071 ||||||| |||||||||||||| || ||||| || | || || || || |||||||| | Sbjct 12547886 AGGACAAGGAAGGAATCCCTCCTGATCAGCAGAGATTGATTTTTGCTGGCAAACAGCTTG 12547945 Query 178072 AAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||||| | |||||||| ||||||||| ||||||| || || || || || | |||| Sbjct 12547946 AAGATGGTTGAACTCTTGCAGATTATAACATCCAAAAGGAGTCGACTCTTCACTTGGTTT 12548005 Query 178132 TGAGACTCAG 178141 |||| || || Sbjct 12548006 TGAGGCTTAG 12548015 Score = 104 bits (114), Expect = 6e-17 Identities = 101/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 178012 AGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCG 178071 |||| || |||||||||||||| || ||||| || | || || || || |||||||| | Sbjct 12606958 AGGATAAGGAAGGAATCCCTCCTGATCAGCAGAGATTGATTTTTGCTGGCAAACAGCTTG 12607017 Query 178072 AAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131 | ||||| | |||||||| ||||||||| ||||||| || || || || || | |||| Sbjct 12607018 AGGATGGTCGAACTCTTGCAGATTATAACATCCAAAAGGAGTCGACTCTTCACTTGGTTT 12607077 Query 178132 TGAGACTCAG 178141 |||| || || Sbjct 12607078 TGAGGCTTAG 12607087 >seq5 Length=39371879 Score = 168 bits (186), Expect = 2e-36 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || |||||| | || || ||||| ||||||||||| || || || || ||| Sbjct 2688881 CAAATCTTTGTCAAAACTTTGACCGGCAAAACCATCACCCTCGAAGTCGAGAGTTCCGAC 2688822 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| || || |||||||||||||| |||||||| ||||| || Sbjct 2688821 ACGATCGACAACGTCAAGGCCAAAATCCAGGACAAAGAAGGCATCCCTCCCGACCAACAG 2688762 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| |||||||| || || || | ||| | || |||||||| || Sbjct 2688761 CGGCTCATCTTCGCCGGGAAACAGCTGGAGGACGGCCGTACTTTGGCTGATTATAATATC 2688702 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || || ||||| Sbjct 2688701 CAAAAGGAGTCGACTCTCCACCTTGT 2688676 Score = 168 bits (186), Expect = 2e-36 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| | || || ||||| ||||||||||| ||||| || || ||| Sbjct 2689109 CAGATCTTCGTCAAAACCTTGACCGGTAAAACCATCACCCTCGAAGTGGAGAGTTCCGAC 2689050 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| || ||||| ||||| ||||| || ||||||||| Sbjct 2689049 ACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCACCCGACCAGCAA 2688990 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||||||||| |||||||||||||| || | || | || ||||||||| || Sbjct 2688989 AGGCTCATCTTCGCCGGGAAACAGCTCGAAGACGGTCGTACCTTGGCGGATTATAACATC 2688930 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || ||||| || || || || Sbjct 2688929 CAGAAGGAGTCAACTCTCCACCTGGT 2688904 Score = 167 bits (184), Expect = 6e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || ||||| | |||||||| || || ||||| ||||| || ||||| ||| Sbjct 2688653 CAAATCTTTGTCAAAACCTTGACAGGAAAGACTATAACCCTGGAGGTCGAGAGCTCGGAC 2688594 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || ||||| || || || ||||| ||||| || ||||| ||| Sbjct 2688593 ACGATTGATAACGTTAAGGCCAAGATCCAAGATAAGGAAGGGATCCCACCAGACCAACAA 2688534 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| || || ||||| || || || ||||| | || ||||| ||| | Sbjct 2688533 CGATTGATCTTCGCTGGGAAGCAGCTTGAGGACGGGAGGACCTTGGCTGATTACAACATA 2688474 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| |||||||| || |||||||||||||| || Sbjct 2688473 CAAAAGGAATCAACCCTTCATCTTGTTTTGAGGCT 2688439 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || | || |||||||| |||||| | ||||||||||| || || Sbjct 2688425 CAGATTTTTGTCAAGACCTTGACTGGAAAAACAATCACCTTGGAGGTGGAAAGTTCGGAT 2688366 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| |||||||||||| || ||||||||||| || || |||||| Sbjct 2688365 ACAATCGATAATGTCAAGGCAAAGATTCAGGATAAGGAAGGAATCCCCCCAGATCAGCAA 2688306 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | |||||||| ||||| || || | || ||||| |||||| | || ||||||||| | Sbjct 2688305 AGGCTTATCTTTGCCGGGAAGCAATTGGAGGATGGGAGGACTTTAGCTGATTATAACATT 2688246 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || ||||| || || || || ||||| Sbjct 2688245 CAGAAAGAGTCTACCCTCCACCTTGT 2688220 Score = 145 bits (160), Expect = 2e-29 Identities = 157/207 (76%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| || || || || || || || |||||||| || || || ||| Sbjct 2689338 CAGATCTTCGTGAAAACCCTGACCGGCAAGACCATAACTCTCGAGGTCGAGAGTTCCGAC 2689279 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| || ||||| ||||| ||||| || ||||||||| Sbjct 2689278 ACCATCGACAACGTTAAGGCCAAGATCCAAGACAAGGAAGGGATCCCACCCGACCAGCAA 2689219 Query 178044 CGACTTATCTTCGC-CGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102 | || |||||||| || |||||||||||||| || | || | || ||||| ||| | Sbjct 2689218 AGGCTCATCTTCGCGTGGCAAACAGCTCGAAGACGGCCGTACCTTGGCGGATTACAACAT 2689159 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 ||| || || || || || || || || Sbjct 2689158 CCAGAAGGAGTCGACTCTCCACCTGGT 2689132 Score = 91.5 bits (100), Expect = 4e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 178021 AAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAA 178080 ||||||| || |||||||| || || || ||||||||||||||||||||||||||||| Sbjct 6357347 AAGGAATACCACCGGACCAACAGCGTCTCATCTTCGCCGGAAAACAGCTCGAAGATGGCC 6357288 Query 178081 GGACTCTTGCCGATTATAACGTCCAAAAAG 178110 |||| | || || || ||| |||| |||| Sbjct 6357287 GGACCTTGGCTGACTACAACATCCAGAAAG 6357258 >seq1 Length=37323695 Score = 168 bits (186), Expect = 2e-36 Identities = 163/208 (78%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||||||||||| ||||||||||| | ||||| || ||||| ||| Sbjct 11148013 CAAATCTTTGTCAAGACTCTCACAGGTAAAACGATCACTTTGGAGGTAGAGAGCTCGGAC 11148072 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||||||||| ||||| || ||||| || || ||||| Sbjct 11148073 ACTATTGACAATGTCAAGGCTAAGATTCAGGATAAAGAGGGTATCCCACCAGATCAGCAG 11148132 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || |||||||| || |||||||||||||| ||||| ||||||||| | Sbjct 11148133 AGGTTGATTTTTGCTGGAAAACAACTTGAAGATGGAAGGACACTTGCTGATTATAACATT 11148192 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||| || ||||| || || |||| || Sbjct 11148193 CAAAAGGAGTCAACCCTTCA-CTTGGTT 11148219 Score = 159 bits (176), Expect = 8e-34 Identities = 159/205 (78%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| ||||| ||||| || ||||| || ||||| | ||||| || || |||||| Sbjct 11148241 CAAATTTTTGTGAAGACTCTTACCGGAAAGACTATCACATTGGAGGTTGAGAGTTCAGAC 11148300 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || |||||| || || || || || ||||| || ||||||||| Sbjct 11148301 ACCATTGATAATGTGAAGGCAAAGATCCAAGATAAGGAGGGTATCCCACCAGACCAGCAA 11148360 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| || || || ||||| ||||||||||| ||||| || || ||||| || Sbjct 11148361 AGGCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGAAGAACTCTCGCTGACTATAATATC 11148420 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| ||||| || || || |||| Sbjct 11148421 CAAAAGGAATCTACCCTTCA-CTTG 11148444 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| || || || || || || ||||| ||||| ||| ||| ||| Sbjct 32435911 CAGATCTTCGTCAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTCGAATCCTCTGAC 32435852 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || |||||| ||||| |||||||| ||||||||||| ||||| |||||| Sbjct 32435851 ACCATCGACAATGTCAAAGCCAAGATCCAGGACAAGGAAGGAATCCCACCGGATCAGCAA 32435792 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||||||||| || | || | ||||| || || | Sbjct 32435791 CGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACCTTAGCCGACTACAATATT 32435732 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || || || Sbjct 32435731 CAGAAGGAATCCACCCTTCACCTCGT 32435706 Score = 156 bits (172), Expect = 1e-32 Identities = 155/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || |||||||| || ||||| || || |||||||| ||||| || ||||| || Sbjct 11147557 CAAATCTTTGTGAAAACCCTAACAGGCAAGACCATCACCCTTGAGGTTGAGAGCTCTGAT 11147616 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||| || ||||| |||||||||||||| ||||||||| Sbjct 11147617 ACTATTGACAATGTCAAGGCTAAGATCCAAGACAAGGAAGGAATCCCTCCTGACCAGCAA 11147676 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | ||||| || || || |||||||| |||||||| | || || || || ||||| || Sbjct 11147677 AGGCTTATTTTTGCTGGCAAACAGCTTGAAGATGGTCGAACCCTAGCTGACTATAATATC 11147736 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || || || || || ||| Sbjct 11147737 CAGAAGGAGTCCACCCTCCAT 11147757 Score = 147 bits (162), Expect = 5e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || ||||||||||| || |||||| | ||||| || ||||| || Sbjct 11147785 CAAATCTTTGTCAAGACACTCACAGGAAAGACTATCACCTTGGAGGTTGAGAGCTCTGAT 11147844 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| ||||| || ||||| |||||||||||||| || || ||| Sbjct 11147845 ACTATTGACAATGTTAAAGCGAAGATCCAAGACAAGGAAGGAATCCCTCCTGATCAACAA 11147904 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||||| || || |||||||| ||||| || | || || || || ||||| || Sbjct 11147905 AGACTTATCTTTGCTGGCAAACAGCTTGAAGACGGTCGCACCCTAGCTGACTATAATATC 11147964 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || || || || || ||| Sbjct 11147965 CAGAAGGAGTCCACCCTTCAT 11147985 Score = 140 bits (154), Expect = 8e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || | || ||||| || || || | ||||| || ||||||||| Sbjct 11148469 CAGATATTTGTGAAGACCTTGACTGGAAAGACAATAACGTTGGAGGTTGATAGCTCAGAC 11148528 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || |||||| |||||||| || || |||||||| |||||||| Sbjct 11148529 ACCATTGATAATGTGAAGGCAAAGATCCAGGACAAGGAGGGGATCCCTCCAGACCAGCAG 11148588 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || || || ||||| || ||||| || ||||| || || || ||| || Sbjct 11148589 AGGTTGATTTTTGCTGGGAAGCAGCTGGAGGATGGGAGAACTCTGGCAGACTACAACATC 11148648 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || ||||||||||| Sbjct 11148649 CAGAAGGAATCCACCTTGCATCTTGTT 11148675 Score = 107 bits (118), Expect = 5e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 178008 ATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAG 178067 || ||||| |||||||| |||||||| || ||||| | | || || || || || || Sbjct 8434100 ATCCAGGATAAAGAAGGCATCCCTCCTGATCAGCAGAGGTTGATTTTTGCTGGTAAGCAA 8434159 Query 178068 CTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTT 178127 || |||||||| | || ||||| ||||||||| ||||||| || || ||||| || ||| Sbjct 8434160 CTGGAAGATGGCCGAACGCTTGCTGATTATAACATCCAAAAGGAGTCCACACTTCACCTT 8434219 Query 178128 GTTTTGAGACTCAG 178141 |||||||| || || Sbjct 8434220 GTTTTGAGGCTTAG 8434233 >seq2 Length=41236440 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| || || || || || || ||| | ||||| ||| ||| ||| Sbjct 32406705 CAGATCTTCGTGAAAACCCTAACGGGTAAGACCATAACCTTGGAGGTCGAATCCTCCGAC 32406646 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| || ||||| ||||| |||||||||||||| ||| Sbjct 32406645 ACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGACCAACAA 32406586 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| ||||| || | || || ||||| |||||| | Sbjct 32406585 CGTCTCATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGTACCCTAGCCGACTATAACATT 32406526 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 32406525 CAGAAGGAGTCCACCCTCCATCTGGT 32406500 >seq3 Length=36364294 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||| ||||| ||||||||||| || | |||||||||||||| ||||| || ||||| | Sbjct 30273910 AGGTATCCCACCGGACCAGCAGAGATTGATCTTCGCCGGAAAGCAGCTTGAGGATGGCCG 30273969 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||||||||| || ||| | || |||| Sbjct 30273970 TACTCTTGCCGACTACAACATTCAGAAAG 30273998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203724552770614