Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thlaspi_20arvense_20[genbank_20GCA_5F000956625.1_202015-03-19] 6,768 sequences; 343,012,389 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq69 253 2e-62 seq65 156 4e-33 seq187 150 2e-31 seq252 125 7e-24 seq49 118 1e-21 seq442 107 2e-18 seq70 105 7e-18 seq5102 104 2e-17 seq130 102 8e-17 >seq69 Length=847923 Score = 253 bits (280), Expect = 2e-62 Identities = 409/582 (70%), Gaps = 11/582 (2%) Strand=Plus/Plus Query 116612 ATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTC 116671 || ||||| || || ||||| | || ||| |||||||| |||||||| || ||||| Sbjct 356456 ATGTTCCCGATTCACTACCCACAGATCTGGGAGATGTACAAGAAGGCCGAAGCATCGTTT 356515 Query 116672 TGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGCTTGAACGAC 116731 ||||| | ||||| || || || || ||||| ||||||||||| | |||||| Sbjct 356516 TGGACGGCGGAGGAAGTCGATCTATCTCAGGACGGTCGCGACTGGGAGAATCTCAACGAC 356575 Query 116732 AACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTC 116791 |||||| || |||||||| ||||| || ||||| ||||||||| ||||| ||||| Sbjct 356576 GGCGAGCGGCACTTCATCAAACACGTCCTCGCCTTCTTCGCCGCCTCAGACGGAATCGTT 356635 Query 116792 AACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGC-TT 116850 |||||||| | || ||| || || || || | ||||||| |||| || Sbjct 356636 CTGGAGAATCTCGCTTCTCGATTCATGTCCGATGTTCAAGTCTCGGAGGCGC-GTGCTTT 356694 Query 116851 CTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGA 116910 |||||| || |||||||| || |||||| | || || || ||||| |||| |||| Sbjct 356695 CTACGGGTTCCAGATCGCGATCGAGAACATCCATTCCGAGATGTACAGTCTCCTCCTCGA 356754 Query 116911 CACGTACGT-GCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGC 116969 ||| ||| | | | | |||||| || | |||| ||| ||||| || || | Sbjct 356755 CACTTACATCAAGGACAAC-AAGGAGAGAGACCATCTGTTTCGCGCAATCGAAACCATCC 356813 Query 116970 CGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGG--CAGAGAGGCCGC 117027 | |||||| ||||||| |||||||| || ||||||| ||| | ||| | Sbjct 356814 CTTGCGTCGCGAAGAAGGCGCAGTGGGCGATGACGTGGATCGACGGATCCCAGA-----C 356868 Query 117028 CTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTT 117087 |||| ||||| | || |||||||| |||||| ||| ||||||| || || || || Sbjct 356869 TTTCGCGGAGCGTATCGTCGCCTTCGCCTGCGTCGAAGGCATCTTCTTCTCCGGTAGCTT 356928 Query 117088 CGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGA 117147 | | | || || ||||| ||||||||||| |||||||| || || || ||| |||||| Sbjct 356929 CTGCTCGATTTTCTGGCTGAAGAAACGCGGGCTCATGCCGGGACTAACCTTCTCCAACGA 356988 Query 117148 GCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTG 117189 | | ||||| | ||||| || |||| ||||| || || || Sbjct 356989 GTTGATCTCTCGAGACGAAGGCTTGCACTGCGATTTCGCGTG 357030 Score = 100 bits (110), Expect = 3e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || || |||| || || || || |||| || ||| | | Sbjct 38434 AATGCAGATTTTCGTGAAGACTCTTGCGGGGAAGACAATAACACTCGAGGTTGAATCATC 38493 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | || | || || | ||||| || |||||||| |||| || Sbjct 38494 GGACACGATCGACAATGTGAAAGCTAAGATCCAGGACAAGGAAGGCATCCCGCCGGATCA 38553 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || ||||| ||||| || | || || ||| ||||||||| Sbjct 38554 GCAGCGGCTGATCTTCGCCGGAAAACAACTGGAAGATGGTCGGACACTCGCCGACTACAA 38613 Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893 |||||||||||| | ||||| ||| Sbjct 38614 CATCCAGAAGGAATCGACGCTTCAT 38638 >seq65 Length=625306 Score = 156 bits (172), Expect = 4e-33 Identities = 163/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| || ||||| ||||| || ||||| || ||||| ||| | || |||||| | Sbjct 413148 AAAGATGCAGATCTTCGTGAAAACCCTTACGGGGAAGACCATAACCCTTGAGGTCGAATC 413089 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | | |||| | | | | |||| | || || | ||||| || || ||||| |||| Sbjct 413088 CTCTGACACCATCGACAATGTCAAAGCGAAGATCCAAGACAAGGAAGGAATCCCGCCGGA 413029 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| ||| | || | |||||| ||||||||||| |||| ||||| ||| |||||| Sbjct 413028 CCAGCAGCGATTGATTTTCGCGGGGAAACAGCTGGAAGACGGCCGCACGCTCGCCGACTA 412969 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||||||| | ||||| ||||| ||| Sbjct 412968 CAACATCCAGAAGGAGTCGACGCTTCATCTCGTG 412935 Score = 147 bits (162), Expect = 2e-30 Identities = 160/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||||||||| ||||| || ||||| || || |||||| |||| || || | | Sbjct 275580 ATGCAAATATTCGTCAAAACCCTAACGGGAAAGACGATCACCCTCGAGGTGGAGAGCTCT 275639 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| ||||||| || |||||||| ||||| ||||||| Sbjct 275640 GACACAATCGATAACG-TCAAGGCCAAAATTCAGGATAAAGAGGGAATCCCTCCGGACCA 275698 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||||| || |||| || || || |||||||| Sbjct 275699 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGACGAACTCTTGCTGACTACAA 275758 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| | || || |||||||| Sbjct 275759 CATTCAGAAGGAGTCGACTCTTCATCTAGT 275788 Score = 111 bits (122), Expect = 2e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || || || |||||||| | || || || | | Sbjct 276264 ATGCAGATTTTCGTGAAGACATTGACCGGTAAGACCATCACTCTGGAGGTTGAGAGCTCG 276323 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| | |||| ||| || | ||||| || || ||||| ||||||| Sbjct 276324 GACACGATTGATAACG-TGAAGGCAAAGATCCAAGACAAGGAAGGGATCCCTCCGGACCA 276382 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || |||||||| || || | ||||| | ||||||||| Sbjct 276383 GCAGCGTCTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACATTGGCCGACTACAA 276442 Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893 ||||||||||||| | || || ||| Sbjct 276443 CATCCAGAAGGAGTCGACTCTTCAT 276467 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| | |||||||| ||||| ||| | || || || | | Sbjct 275808 ATGCAGATCTTCGTTAAAACCTTGACGGGCAAGACCATTACCCTGGAGGTGGAGAGCTCG 275867 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | |||||||| ||||| || |||| || Sbjct 275868 GACACCATTGACAACG-TGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCGGATCA 275926 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| ||| || || ||||| || |||| | || | |||||||| Sbjct 275927 GCAGAGGCTGATCTTCGCCGGAAAGCAGCTTGAAGACGGCAGAACATTGGCTGACTACAA 275986 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | || || || | |||||||| Sbjct 275987 CATCCAGAAGGAGTCTACACTTCACTTGGTGTTGCG 276022 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || ||||| |||||| | || || ||| | | Sbjct 275352 ATGCAGATCTTCGTTAAGACTCTCACCGGGAAAACGATCACCCTTGAGGTGGAAAGCTCT 275411 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || | | | || || ||||| ||||| |||| || Sbjct 275412 GACACGATCGACAACGTTAAAGCCAAGA-TCCAGGATAAGGAGGGAATCCCACCGGATCA 275470 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| ||| || || ||| |||| |||| | || | ||| ||||| Sbjct 275471 GCAGAGGCTAATCTTCGCCGGAAAGCAGTTGGAAGACGGCAGAACATTGGCCGATTACAA 275530 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || || || Sbjct 275531 CATCCAGAAGGAGTCGACTCTTCA 275554 >seq187 Length=227058 Score = 150 bits (166), Expect = 2e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||||||||| || ||||| ||||| || ||||| || || |||||| | || ||||| | Sbjct 169909 AAAAATGCAGATCTTCGTGAAAACCCTGACGGGGAAGACAATCACCCTTGAGGTCGAGTC 169850 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||||| | | | | |||||| || || | ||||| || || ||||| |||| Sbjct 169849 CTCCGACACCATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAAGGAATCCCTCCGGA 169790 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| ||| | || | ||| || || ||||| || |||| ||||||||| |||||| Sbjct 169789 CCAGCAGCGATTGATTTTCGCCGGGAAGCAGCTCGAGGACGGACGCACCCTCGCCGACTA 169730 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||||| | ||||| || || || Sbjct 169729 CAACATCCAGAAGGAGTCGACGCTTCACCTGGT 169697 >seq252 Length=291119 Score = 125 bits (138), Expect = 7e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || ||||| || || |||||| |||| || || | Sbjct 179999 ATGCAGATCTTCGTCAAAACCCTAACGGGAAAGACGATCACCCTCGAGGTGGAGAGTTCT 179940 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| ||||| | ||||| ||||| ||||| | ||||| Sbjct 179939 GACACCATCGACAACG-TCAAGGCTAAAATCCAAGACAAGGAGGGGATCCCACCAGACCA 179881 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| | || |||| ||| || || || || || |||| || || || |||||||| Sbjct 179880 GCAAAGGCTGATCTTCGCCGGGAAGCAACTCGAGGACGGACGAACTCTTGCTGACTACAA 179821 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| | || || ||||||||| Sbjct 179820 CATCCAGAAGGAGTCGACTCTTCATCTAGTG 179790 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| | || ||||| || ||||| | || || || | | Sbjct 179543 ATGCAGATTTTCGTTAAAACCTTGACCGGCAAGACGATCACATTGGAGGTGGAGAGCTCG 179484 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| | |||| ||| || | ||||| || ||||| || |||| || Sbjct 179483 GACACGATTGACAACG-TGAAGGCAAAGATCCAAGACAAGGAAGGCATTCCTCCGGATCA 179425 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| | | |||| ||| || || ||||| || |||| | || | ||||||||| Sbjct 179424 GCAAAGGTTGATCTTCGCCGGAAAGCAGCTTGAGGACGGCAGAACATTGGCCGACTACAA 179365 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||| ||||||||| | || || || | |||||||| Sbjct 179364 CATTCAGAAGGAGTCTACACTTCACTTGGTGTTGCG 179329 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| |||||| | |||||||| ||||||||| | || || || | | Sbjct 179771 ATGCAGATTTTCGTTAAAACGTTGACGGGCAAGACCATCACCTTGGAGGTTGAGAGCTCG 179712 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | ||||| || |||||||| |||| || Sbjct 179711 GACACAATTGACAACGTT-AAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGATCA 179653 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| ||| || || ||||| || |||| | || | || ||||| Sbjct 179652 GCAGAGGTTGATCTTCGCCGGAAAGCAGCTTGAGGACGGCAGAACATTGGCTGATTACAA 179593 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||| | || || ||||| ||| Sbjct 179592 TATCCAGAAGGAGTCGACTCTTCATCTGGTG 179562 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || || |||||| |||| || ||| | Sbjct 180227 ATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACGATCACCCTCGAGGTGGAAAGTTCT 180168 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || | | | || || ||||| ||||| |||| || Sbjct 180167 GACACGATCGACAACGTTAAAGCCAAGA-TCCAGGATAAGGAGGGAATCCCACCGGATCA 180109 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| ||| || || ||| |||| |||| || || || ||| ||||| Sbjct 180108 GCAGAGGCTTATCTTCGCCGGAAAGCAGTTGGAAGACGGCCGTACTCTTGCCGATTACAA 180049 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || ||||| || Sbjct 180048 CATCCAGAAGGAATCTACTCTCCATCTGGT 180019 Score = 91.5 bits (100), Expect = 2e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | || || || |||||||| | || || || | | Sbjct 178859 ATGCAGATTTTTGTGAAGACCTTAACCGGTAAGACCATCACACTGGAGGTTGAGAGCTCG 178800 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | ||||| || || ||||| ||||||| Sbjct 178799 GACACCATTGACAACG-TGAAGGCGAAGATCCAAGACAAGGAAGGGATCCCTCCGGACCA 178741 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || |||||||| || || | ||||| | |||||||| Sbjct 178740 GCAGCGTCTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACATTGGCTGACTACAA 178681 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||| |||||| | || || || Sbjct 178680 CATCCAAAAGGAGTCGACTCTTCA 178657 >seq49 Length=794425 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| ||||| ||||||||||||||| | || || || | | Sbjct 170694 ATGCAGATCTTCGTCAAAACCCTCACTGGCAAAACCATCACCCTAGAAGTTGAGAGCTCA 170635 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | || | || |||| ||||| || || ||||| ||||||| Sbjct 170634 GACACAATCGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGGATCCCTCCGGACCAA 170575 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||||||| ||| ||||||||||| || || | ||||| ||| || ||||| Sbjct 170574 CAGAGACTCATCTTCGCAGGCAAACAGCTTGAAGATGGCCGCACTCTCGCTGATTACAAT 170515 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| ||| | || ||||| Sbjct 170514 ATCCAGAAAGAGTCAACCCTGCA 170492 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||||||||| || | || || ||| | | Sbjct 170466 ATGCAGATCTTCGTCAAGACTCTTACAGGCAAAACCATAACATTGGAAGTTGAAAGCTCG 170407 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| ||| |||| ||||| || || ||||| |||||||| Sbjct 170406 GACACTATTGACAATGTCAAGGCAAAGATTCAAGACAAGGAAGGGATCCCTCCGGACCAG 170347 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||||| | ||| ||||||||||| || || | || || || || |||||| Sbjct 170346 CAGAGACTCATATTCGCTGGCAAACAGCTAGAGGATGGTCGAACGCTTGCAGATTACAAC 170287 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || ||||| || | || ||||| | ||| | || |||| || || Sbjct 170286 ATACAGAAAGAATCAACCTTGCATTTGGTGCTCCGTCTGAGAGGTGG 170240 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || || || || || || |||||||| || | || || || | | Sbjct 170238 ATGCAGATATTTGTCAAGACCCTTACCGGTAAAACCATAACATTGGAAGTGGAGAGCTCA 170179 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | || | || |||| ||||| || || ||||| |||| || Sbjct 170178 GACACAATCGACAATGTTAAAGCGAAGATTCAAGACAAGGAAGGAATCCCTCCGGATCAA 170119 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||||||| ||| ||||||||||| || || | ||||| || || |||||| Sbjct 170118 CAGAGACTCATCTTCGCCGGCAAACAGCTAGAGGATGGTCGCACTCTTGCTGATTACAAC 170059 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 || ||||||||| | ||||| || || |||||||| Sbjct 170058 ATACAGAAGGAGTCAACGCTTCACCTTGTGTTGCG 170024 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || || ||||||||||||||| | || || || | | Sbjct 170922 ATGCAGATCTTTGTTAAAACCCTTACAGGCAAAACCATCACCCTAGAAGTTGAGAGCTCG 170863 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| ||| |||| ||||| || || || || |||||||| Sbjct 170862 GACACTATCGACAATGTCAAGGCAAAGATTCAGGACAAGGAAGGGATTCCTCCGGACCAG 170803 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| ||| ||||| ||||| || || | || || || || ||||| Sbjct 170802 CAGAGGCTTATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGAACTCTTGCAGATTACAAT 170743 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| || | || ||||| Sbjct 170742 ATCCAGAAAGAATCAACCCTGCA 170720 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| ||||| ||||||||||||||| | || || || | | Sbjct 171150 ATGCAAATTTTTGTTAAAACCCTCACTGGCAAAACCATCACCCTAGAAGTTGAGAGCTCG 171091 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||||| || |||| || ||||| || ||||| |||| || Sbjct 171090 GATACCATCGACAATGTCAAGGCTAAGATTCAGGATAAAGAAGGAATCCCTCCGGATCAA 171031 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || || |||||||| || || | || || | || ||||| Sbjct 171030 CAGAGGCTGATCTTTGCCGGTAAACAGCTCGAGGATGGCCGTACTTTGGCTGATTACAAT 170971 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 ||||| |||||| | || || || Sbjct 170970 ATCCAAAAGGAGTCAACCCTTCA 170948 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| | || ||| || ||| | || ||||| ||| ||||||||||| | | Sbjct 171606 ATGCAAATCTACGCAAAGACTCTCCAAGAAAAGACCATAACCCTCGACGTCGAAAGCTCA 171547 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | ||||| || || ||||| |||||| Sbjct 171546 GACACCATCAACAATGTCAAGGCAAAGATACAGGACAAGGAAGGAATCCCTCTAGACCAG 171487 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| | || |||| || || |||||||| || || | || ||| | || ||||| Sbjct 171486 CAAAGGCTGATCTTTGCCGGTAAACAGCTTGAGGATGGTCGTACCTTGGCTGATTACAAT 171427 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 || || ||||| | || ||||| Sbjct 171426 ATTCAAAAGGATTCAACCCTGCA 171404 >seq442 Length=166222 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || || || || |||||| |||| || || | || Sbjct 80874 ATGCAGATCTTCGTCAAAACCCTAACAGGAAAGACGATCACCCTCGAGGTGGAGAGCTCC 80933 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| || || || || ||||||| Sbjct 80934 GACACCATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCTCCGGACCA 80992 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| ||| || || || || || |||| || || || |||||||| Sbjct 80993 GCAGAGGTTGATCTTCGCCGGAAAGCAACTCGAGGACGGCCGGACTCTTGCTGACTACAA 81052 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| | || || ||||| ||| Sbjct 81053 CATCCAGAAGGAGTCGACCCTTCATCTCGTG 81083 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| |||||||| ||||| || || ||||| || |||||| | || ||||| | | Sbjct 81786 ATGCAGATATTCGTGAAAACCCTTACCGGCAAGACAATCACCCTTGAAGTCGAGAGCTCT 81845 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | ||||| || || ||||| | ||||| Sbjct 81846 GACACTATTGACAACG-TGAAGGCGAAGATCCAGGACAAGGAAGGTATCCCTCCAGACCA 81904 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||| | ||| || || ||||| || || | ||||| | |||||||| Sbjct 81905 GCAGCGTCTCATTTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACATTGGCTGACTACAA 81964 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || || || Sbjct 81965 CATCCAGAAGGAGTCGACCCTTCA 81988 Score = 91.5 bits (100), Expect = 2e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || || || |||||| |||| || ||| | | Sbjct 80646 ATGCAGATCTTCGTTAAGACTCTGACCGGGAAGACTATCACCCTCGAGGTGGAAAGCTCT 80705 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| |||| | | || || || || || || |||| || Sbjct 80706 GACACCATCGACAACGTTAAAGCCAAAA-TCCAGGATAAGGAAGGGATTCCTCCGGATCA 80764 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| ||| || || ||| |||| |||| || || | ||||||||| Sbjct 80765 GCAGAGGCTTATCTTCGCCGGAAAGCAGTTGGAAGACGGCCGAACTTTGGCCGACTACAA 80824 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || || || Sbjct 80825 CATCCAGAAGGAGTCGACCCTCCA 80848 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || ||| | || || || |||||||| | || || || | || Sbjct 81102 ATGCAAATCTTCGTCAAGACGTTGACCGGAAAGACCATCACTTTGGAAGTGGAGAGCTCC 81161 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| ||||| | ||||| || || || || |||| || Sbjct 81162 GACACTATTGACAACG-TGAAGGCTAAAATCCAGGACAAGGAAGGTATTCCTCCGGATCA 81220 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| || || || || || |||| || || | |||||||| Sbjct 81221 GCAGAGATTGATCTTCGCCGGAAAGCAACTTGAAGACGGCCGAACTTTGGCTGACTACAA 81280 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | || || || | || ||||| Sbjct 81281 CATCCAGAAGGAGTCTACACTTCACTTGGTCTTGCG 81316 >seq70 Length=414679 Score = 105 bits (116), Expect = 7e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 40685 GAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG 40744 |||| ||||| || ||||| ||||| || ||||| || || || ||| | || || ||| Sbjct 19551 GAAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAAT 19492 Query 40745 CCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 | | || | | | | | |||| || || | ||||| || || ||||| ||| Sbjct 19491 CGTCGGATACGATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAAGGGATCCCGCCGG 19432 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 | ||||| || || |||| ||| || || |||||||| |||| | || ||| |||| Sbjct 19431 ATCAGCAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGAAGGACTCTCGCGGACT 19372 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||||||| | ||||| || Sbjct 19371 ACAACATCCAGAAGGAGTCGACGCTTCA 19344 >seq5102 Length=3010 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | ||||| || || ||||| | || ||||| | || Sbjct 2925 ATGCAGATTTTCGTCAAGACCTTGACGGGGAAGACAATCACACTTGAAGTCGAGAGCTCC 2866 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | ||||| || ||||| || ||||||| Sbjct 2865 GACACCATTGACAACG-TGAAGGCGAAGATCCAGGACAAGGAAGGCATTCCTCCGGACCA 2807 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || |||||||| || || | ||||| | ||||| || Sbjct 2806 GCAGCGTCTCATCTTCGCTGGAAAACAGCTCGAGGATGGTCGCACATTGGCTGACTATAA 2747 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || || || Sbjct 2746 CATCCAGAAGGAGTCGACCCTTCA 2723 >seq130 Length=298546 Score = 102 bits (112), Expect = 8e-17 Identities = 138/190 (73%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 40692 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGA 40751 ||| || |||||||| || | || || || ||||||||| | || || |||| | | || Sbjct 143581 GCAGATTTTCGTAAAGACTTTGACAGGGAAGACCATCACCTTAGAAGTGGAAGACTCGGA 143522 Query 40752 CAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGC 40810 || | | | |||| | |||| || || | || |||||||| || || ||||||||| Sbjct 143521 CACCATCGATAACG-TGAAGGCCAAGATCCAGGATAAAGAGGGTATTCCGCCGGACCAGC 143463 Query 40811 AACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 40870 | | || |||| ||| ||||||||||| || || | ||||| | ||| ||||||| Sbjct 143462 AGAGGCTGATCTTCGCTGGCAAACAGCTTGAGGATGGTCGCACATTGGGCGATTACAACA 143403 Query 40871 TCCAGAAGGA 40880 || ||||||| Sbjct 143402 TCAAGAAGGA 143393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515175612455680